Oliveira AS, Alves M, Leitão F, Tacão M, Henriques I, Castro PML, Amorim, CL (2023) Bioremediation of coastal aquaculture effluents spiked with florfenicol using microalgae-based granular sludge – a promising solution for recirculating aquaculture systems.
Water Research, in press
119733.
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Peixoto, S., Oliveira, JMM, Henriques, I, Morgado, R, Soares, AMVM , Loureiro, S (2022) Pollution- induced community tolerance framework - disc diffusion method to assess the impact of silver nanoparticles in soils: Potential relevance for risk assessment.
APPLIED SOIL ECOLOGY, 169, 104185
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Leitão F, Pinto G, Amaral J, Monteiro P, Henriques I. (2022) New insights into the role of constitutive bacterial rhizobiome and phenolic compounds in two Pinus spp. with contrasting susceptibility to pine pitch canker.
Tree Physiol. ,
.
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Teixeira P, Tacão M, Henriques I (2022) Occurrence and distribution of Carbapenem-resistant Enterobacterales and carbapenemase genes along a highly polluted hydrographic basin.
Environmental Pollution, 300
118958.
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Alcaide E., Rodrigues C.F., Henriques I., Hilário A. (2022) Microbial associations of abyssal gorgonians and anemones (>4000 meters depth) at the Clarion-Clipperton Fracture Zone.
Frontiers In Microbiology, 13
828469.
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Teixeira P., Pinto N., Henriques I., Tacão M. (2022) KPC-3-, GES-5-, and VIM-1-Producing Enterobacterales Isolated from Urban Ponds.
International Journal Of Emvironmental Research And Public Health, 19
, (10), 5848.
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Silva I., Alves M., Malheiro C., Silva A.R.R., Loureiro S., Henriques I., González-Alcaraz M.N. . (2022) Short-Term Responses of Soil Microbial Communities to Changes in Air Temperature, Soil Moisture and UV Radiation.
Genes, 13
, (5), 850.
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Rodrigues L., Coelho E., Madeira R., Teixeira P., Henriques I., Coimbra M. A. (2022) (2022) Food Ingredients Derived from Lemongrass Byproduct Hydrodistillation: Essential Oil, Hydrolate, and Decoction.
Molecules, 27
, (8), 2493.
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Rocha J., Ferreira C., Mil-Homens D., Busquets A., Fialho A. M., Henriques I., Gomila M., Manaia C.M. (2022) Third generation cephalosporin-resistant Klebsiella pneumoniae thriving in patients and in wastewater: what do they have in common? .
BMC Genomics, 23
72.
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Tacão M., Laço J, Teixeira P., Henriques I. (2022) CTX-M-Producing Bacteria Isolated from a Highly Polluted River System in Portugal.
International Journal Of Environmental Research And Public Health, 19
, (19), 11858.
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Tavares D.S.R., Tacão M., Ramalheira E., Ferreira S., Henriques I. (2022) Report and Comparative Genomics of an NDM-5-Producing Escherichia coli in a Portuguese Hospital: Complex Class 1 Integrons as Important Players in blaNDM Spread.
Micrrorganisms, 10
, (11), 2243.
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Peixoto, P, Loureiro, S, Henriques I (2022) The impact of silver sulfide nanoparticles and silver ions in soil microbiome.
JOURNAL OF HAZARDOUS MATERIALS, 422, 126793
.
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Peixoto S., Henriques I., Loureiro S. (2021) Long-term effects of Cu(OH)2 nanopesticide exposure on soil microbial communities.
ENVIRONMENTAL POLLUTION, 269
116113.
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Silva, I., Tacão, M., Henriques, I. (2021) Selection of antibiotic resistance by metals in a riverine bacterial community.
CHEMOSPHERE, 263, 127936
.
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Dias M. F., de Castro G. M., de Paiva M. C., Reis M. P., Facchin S., do Carmo A. O., Alves M. S., Suhadolnik M. L., Motta A., Henriques I., Kalapothakis E., Lobo F. P., Nascimento A. M. A. (2021) Exploring antibiotic resistance in environmental integron-cassettes through intI-attC amplicons deep sequencing.
Brazilian Journal Of Microbiology, 52
, (1), 363-372.
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Almeida A.R.,Tacão, M., Soares J., Domingues I., Henriques, I. (2021) Tetracycline-resistant bacteria selected from water and zebrafish after antibiotic exposure.
International Journal Of Environmental Research And Public Health, 18
, (6), 3218.
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Araújo S. , Tacão M., Baraúna R., Ramos R., Silva A., Henriques I. (2021) Genome analysis of two multidrug-resistant Escherichia coli O8:H9-ST48 strains isolated from lettuce.
GENE, 785
145603.
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Gabriel A, Costa S, Henriques I, Lopes I. (2021) Effects of long-term exposure to increased salinity on the amphibian skin bacterium Erwinia toletana. .
Archives Of Environmental Contamination And Toxicology , 80
779-788.
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Almeida A.R., Domingues I., Henriques I. (2021) Zebrafish and water microbiome recovery after oxytetracycline exposure.
ENVIRONMENTAL POLLUTION, 272
.
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Lopes R. Fuentes-Castillo D., Fontana H., Rodrigues L., Dantas K., Cerdeira L., Henriques I., Lincopan N. (2021) Endophytic Lifestyle of Global Clones of Extended-Spectrum b-Lactamase-Producing Priority Pathogens in Fresh Vegetables: a Trojan Horse Strategy Favoring Human Colonization? .
MSystems, 9
e01125-20.
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Araújo S., Sousa M., Tacão M., Baraúna R.A., Silva A., Ramos R., Alves A., Manaia C. M., Henriques I. (2021) Carbapenem-resistant bacteria over a wastewater treatment process: Carbapenem-resistant Enterobacteriaceae in untreated wastewater and intrinsically-resistant bacteria in final effluent.
Science Of The Total Environment, 782
146892.
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Oliveira, J.M.M., Henriques, I., Read, D.S., Gweon, H.S., Morgado, R.G., Peixoto, S., Correia, A., Soares A.M.V.M., Loureiro, S. (2021) Gut and faecal bacterial community of the terrestrial isopod Porcellionides pruinosus: potential use for monitoring exposure scenarios. .
ECOTOXICOLOGY, 30
.
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Araújo S. , Azenha S.R., Henriques I. , Tacão M. (2021) qnrA gene diversity in Shewanella spp.
Microbiology, 167
, (12), .
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Teixeira P., Tacão M., Pureza L., Gonçalves J., Silva A., Cruz-Schneider M. P., Henriques I. (2020) Occurrence of carbapenemase-producing Enterobacteriaceae in a Portuguese river: blaNDM, blaKPC and blaGES among the detected genes.
Environmental Pollution, 260
113913.
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Alves J., Dias L., Mateus J., Marques J., Gracas D., Ramos R., Seldin L., Henriques I., Silva A., Folador A. (2020) Resistome in Lake Bolonha, Brazilian Amazon: Identification of Genes Related to Resistance to Broad-Spectrum Antibiotics.
FRONTIERS IN MICROBIOLOGY, 11
.
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Teixeira P., Tacao M., Barauna R.A., Silva A., Henriques I. (2020) Genomic analysis of Chromobacterium haemolyticum: insights into the species resistome, virulence determinants and genome plasticity.
MOLECULAR GENETICS AND GENOMICS, 295
, (4), 1001-1012.
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Tavares R.D.S., Tacão M., Figueiredo A.S., Duarte A.S., Esposito F., Lincopan N., Manaia C.M., Henriques I. (2020) Genotypic and phenotypic traits of blaCTX-M-carrying Escherichia coli strains from an UV-C-treated wastewater effluent.
Water Research,
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Rodriguez-Mozaz S., Vaz-Moreira I., Giustina S. V. D., Llorca M., Barceló D., Schubert S., Berendonk T., Michael-Kordatou I., Fatta-Kassinos D., Martinez J. L., Elpers C., Henriques I., Jaeger T., Schwartz T., Paulshus E., O'Sullivan K., Pärnänenm K. M. M:, Virta M., Do T. T., Walsh F., Manaia C. M. (2020) Antibiotic residues in final effluents of European wastewater treatment plants and their impact on the aquatic environment.
Environment International, 140
.
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Peixoto, S., Khodaparast, Z., Cornelis, G., Lahive, E., Green Etxabe, A., Baccaro, M., Papadiamantis, A.G., Gonçalves, S.F., Lynch, I., Busquets-Fite, M., Punt, V., Loureiro, S., Henriques, I. (2020) Impact of Ag2S NPs on soil bacterial community–A terrestrial mesocosm approach.
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 206
, (111405), .
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Oliveira A.M.S., Barauna R.A., Marcon D.J., Lago L.A.B., Silva A., Lusio J., Tavares R.D.S., Tacao M., Henriques I., Schneider M.P.C. (2020) Occurrence, antibiotic-resistance and virulence of E. coli strains isolated from mangrove oysters (Crassostrea gasar) farmed in estuaries of Amazonia.
MARINE POLLUTION BULLETIN, 157
.
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Marano R.B.M., Fernandes T., Manaia C.M., Nunes O., Morrison D., Berendonk T.U., Kreuzinger N., Telson T., Corno G., Fatta-Kassinos D., Merlin C., Topp E., Jurkevitch E., Henn L., Scott A., Hess S., Slipko K., Laht M., Kisand V., Di Cesare A., Karaolia P., Michael S.G., Petre A.L., Rosal R., Pruden A., Riquelme V., Aguera A., Esteban B., Luczkiewicz A., Kalinowska A., Leonard A., Gaze W.H., Adegoke A.A., Stenstrom T.A., Pollice A., Salerno C., Schwermer C.U., Krzeminski P., Guilloteau H., Donner E., Drigo B., Libralato G., Guida M., Burgmann H., Beck K., Garelick H., Tacao M., Henriques I., Martinez-Alcala I., Guillen-Navarro J.M., Popowska M., Piotrowska M., Quintela-Baluja M., Bunce J.T., Polo-Lopez M.I., Nahim-Granados S., Pons M.N., Milakovic M., Udikovic-Kolic N., Ory J., Ousmane T., Caballero P., Oliver A., Rodriguez-Mozaz S., Balcazar J.L., Jager T., Schwartz T., Yang Y., Zou S.C., Lee Y.H., Yoon Y., Herzog B., Mayrhofer H., Prakash O., Nimonkar Y., Heath E., Baraniak A., Abreu-Silva J., Choudhury M., Munoz L.P., Krizanovic S., Brunetti G., Maile-Moskowitz A., Brown C., Cytryn E. (2020) A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants.
ENVIRONMENT INTERNATIONAL, 144
.
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Azevedo L., Tacão M., Silva A.R., Matos P., Henriques I., Ramalheira E., Ferreira S. (2020) Surveillance of plasmid-mediated mcr-1, mcr-3, mcr-4 and mcr-5 genes in human isolates, in Aveiro, Portugal.
International Journal Of Infectious Diseases , 101
343.
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Silva A.R., Tacão M., Azevedo L., Matos P., Ramalheira E., Henriques I., Ferreira S. (2020) Epidemiology of carbapenemases-producing bacteria in Centro Hospitalar Baixo Vouga.
International Journal Of Infectious Diseases , 101
18.
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Fidalgo C., Proenca D.N., Morais P.V., Henriques I., Alves A. (2019) The endosphere of the salt marsh plant Halimione portulacoides is a diversity hotspot for the genus Salinicola: description of five novel species Salinicola halimionae sp. nov., Salinicola aestuarinus sp. nov., Salinicola endophyticus sp. nov., Salinicola halophyticus sp. nov. and Salinicola lusitanus sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 69
, (1), 46-62.
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Almeida A.R., Tacao M., Machado A.L., Golovko O., Zlabek V., Domingues I., Henriques I. (2019) Long-term effects of oxytetracycline exposure in zebrafish: A multi-level perspective.
CHEMOSPHERE, 222
333-344.
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Freitas D.Y., Araujo S., Folador A.R.C., Ramos R.T.J., Azevedo J.S.N., Tacao M., Silva A., Henriques I., Barauna R.A. (2019) Extended Spectrum Beta-Lactamase-Producing Gram-Negative Bacteria Recovered From an Amazonian Lake Near the City of Belem, Brazil.
FRONTIERS IN MICROBIOLOGY, 10
.
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Parnanen K.M.M., Narciso-da-Rocha C., Kneis D., Berendonk T.U., Cacace D., Do T.T., Elpers C., Fatta-Kassinos D., Henriques I., Jaeger T., Karkman A., Martinez J.L., Michael S.G., Michael-Kordatou I., O'Sullivan K., Rodriguez-Mozaz S., Schwartz T., Sheng H.J., Sorum H., Stedtfeld R.D., Tiedje J.M., Della Giustina S.V., Walsh F., Vaz-Moreira I., Virta M., Manaia C.M. (2019) Antibiotic resistance in European wastewater treatment plants mirrors the pattern of clinical antibiotic resistance prevalence.
SCIENCE ADVANCES, 5
, (3), .
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Rocha B.S., Correia M.G., Pereira A., Henriques I., Da Silva G.J., Laranjinha J. (2019) Inorganic nitrate prevents the loss of tight junction proteins and modulates inflammatory events induced by broad-spectrum antibiotics: A role for intestinal microbiota?.
NITRIC OXIDE-BIOLOGY AND CHEMISTRY, 88
27-34.
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Santos J.D.C., Coelho E., Silva R., Passos C.P., Teixeira P., Henriques I., Coimbra M.A. (2019) Chemical composition and antimicrobial activity of Satureja montana byproducts essential oils.
INDUSTRIAL CROPS AND PRODUCTS, 137
541-548.
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Santos M., Peixoto S., Pereira J.L., Luis A.T., Henriques I., Goncalves F.J.M., Pereira M.J., Oliveira H., Vidal T. (2019) Using flow cytometry for bacterioplankton community analysis as a complementary tool to Water Framework Directive to signal putatively impacted sites.
SCIENCE OF THE TOTAL ENVIRONMENT, 695
.
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Alves M. S., Pereira A., Vicente C., Mota M., Henriques I. (2019) Pseudomonas associated with Bursaphelenchus xylophilus, its insect vector and the host tree: A role in pine wilt disease?.
Forest Pathology, 49
e12564.
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Almeida A.R., Alves M., Domingues I., Henriques I. (2019) The impact of antibiotic exposure in water and zebrafish gut microbiomes: A 16S rRNA gene-based metagenomic analysis.
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 186
.
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Amorim C.L., Alves M., Castro P.M.L., Henriques I. (2018) Bacterial community dynamics within an aerobic granular sludge reactor treating wastewater loaded with pharmaceuticals.
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 147
905-912.
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Tacao M., Araujo S., Vendas M., Alves A., Henriques I. (2018) Shewanella species as the origin of bla(OXA-48) genes: insights into gene diversity, associated phenotypes and possible transfer mechanisms.
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 51
, (3), 340-348.
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Alves M., Pereira A., Vicente C., Matos P., Henriques J., Lopes H., Nascimento F., Mota M., Correia A., Henriques I. (2018) The role of bacteria in pine wilt disease: insights from microbiome analysis.
FEMS MICROBIOLOGY ECOLOGY, 94
, (7), .
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Narciso-da-Rocha C., Rocha J., Vaz-Moreira I., Lira F., Tamames J., Henriques I., Martinez J.L., Manaia C.M. (2018) Bacterial lineages putatively associated with the dissemination of antibiotic resistance genes in a full-scale urban wastewater treatment plant.
ENVIRONMENT INTERNATIONAL, 118
179-188.
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da Costa W.L.O., Araujo C.L.D., Dias L.M., Pereira L.C.D., Alves J.T.C., Araujo F.A., Folador E.L., Henriques I., Silva A., Folador A.R.C. (2018) Functional annotation of hypothetical proteins from the Exiguobacterium antarcticum strain B7 reveals proteins involved in adaptation to extreme environments, including high arsenic resistance.
PLOS ONE, 13
, (6), .
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Silva I., Tacao M., Tavares R.D.S., Miranda R., Araujo S., Manaia C.M., Henriques I. (2018) Fate of cefotaxime-resistant Enterobacteriaceae and ESBL-producers over a full-scale wastewater treatment process with UV disinfection.
SCIENCE OF THE TOTAL ENVIRONMENT, 639
1028-1037.
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Leal J.F., Henriques I.S., Correia A., Santos E.B.H., Esteves V.I. (2017) Antibacterial activity of oxytetracycline photoproducts in marine aquaculture's water.
ENVIRONMENTAL POLLUTION, 220
644-649.
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Oliveira J.M.M., Galhano V., Henriques I., Soares A.M.V.M., Loureiro S. (2017) Basagran (R) induces developmental malformations and changes the bacterial community of zebrafish embryos.
ENVIRONMENTAL POLLUTION, 221
52-63.
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Pires C., Franco A.R., Pereira S.I.A., Henriques I., Correia A., Magan N., Castro P.M.L. (2017) Metal(loid)-Contaminated Soils as a Source of Culturable Heterotrophic Aerobic Bacteria for Remediation Applications.
GEOMICROBIOLOGY JOURNAL, 34
, (9), 760-768.
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Fidalgo C., Rocha J., Proenca D.N., Morais P.V., Alves A., Henriques I. (2017) Saccharospirillum correiae sp nov., an endophytic bacterium isolated from the halophyte Halimione portulacoides.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 67
, (6), 2026-2030.
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Fidalgo C., Martins R., Proenca D.N., Morais P.V., Alves A., Henriques I. (2017) Zunongwangia endophytica sp nov., an endophyte isolated from the salt marsh plant, Halimione portulacoides, and emended description of the genus Zunongwangia.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 67
, (8), 3004-3009.
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Fidalgo C., Rocha J., Martins R., Proenca D.N., Morais P.V., Henriques I., Alves A. (2017) Altererythrobacter halimionae sp nov and Altererythrobacter endophyticus sp nov., two endophytes from the salt marsh plant Halimione portulacoides.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 67
, (8), 3057-3062.
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Leite L., Jude-Lemeilleur F., Raymond N., Henriques I., Garabetian F., Alves A. (2017) Phylogenetic diversity and functional characterization of the Manila clam microbiota: a culture-based approach.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 24
, (27), 21721-21732.
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Tacao M., Silva I., Henriques I. (2017) Culture-independent methods reveal high diversity of OXA-48-like genes in water environments.
JOURNAL OF WATER AND HEALTH, 15
, (4), 519-525.
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Araujo S., Silva I.A.T., Tacão M., Patinha C., Alves A., Henriques I. (2017) Characterization of antibiotic resistant and pathogenic Escherichia coli in irrigation water and vegetables in household farms.
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 257
192-200.
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Tacao M., Tavares R.D., Teixeira P., Roxo I., Ramalheira E., Ferreira S., Henriques I. (2017) mcr-1 and bla(KPC-3) in Escherichia coli Sequence Type 744 after Meropenem and Colistin Therapy, Portugal.
EMERGING INFECTIOUS DISEASES, 23
, (8), 1419-1421.
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Fidalgo C., Henriques I., Rocha J., Tacao M., Alves A. (2016) Culturable endophytic bacteria from the salt marsh plant Halimione portulacoides: phylogenetic diversity, functional characterization, and influence of metal(loid) contamination.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 23
, (10), 10200-10214.
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Gomes J.C.M, Azevedo J.S.N., Veras A.A.O., Alves J.T.C., Henriques I., Correia A., da Silva A.L.C., Carneiro A.R. (2016) Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal).
Genomics Data, 8
21-24.
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Alves M., Pereira A., Matos P., Henriques J., Vicente C., Aikawa T., Hasegawa K., Nascimento F., Mota M., Correia A., Henriques I. (2016) Bacterial community associated to the pine wilt disease insect vectors Monochamus galloprovincialis and Monochamus alternatus.
SCIENTIFIC REPORTS, 6
.
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Rocha J., Tacao M., Fidalgo C., Alves A., Henriques I. (2016) Diversity of endophytic Pseudomonas in Halimione portulacoides from metal(loid)-polluted salt marshes.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 23
, (13), 13255-13267.
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Henriques I., Tacao M., Leite L., Fidalgo C., Araujo S., Oliveira C., Alves A. (2016) Co-selection of antibiotic and metal(loid) resistance in gram-negative epiphytic bacteria from contaminated salt marshes.
MARINE POLLUTION BULLETIN, 109
, (1), 427-434.
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Fidalgo C., Riesco R., Henriques I., Trujillo M.E., Alves A. (2016) Microbacterium diaminobutyricum sp nov., isolated from Halimione portulacoides, which contains diaminobutyric acid in its cell wall, and emended description of the genus Microbacterium.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 66
4492-4500.
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Teixeira P., Tacao M., Alves A., Henriques I. (2016) Antibiotic and metal resistance in a ST395 Pseudomonas aeruginosa environmental isolate: A genomics approach.
MARINE POLLUTION BULLETIN, 110
, (1), 75-81.
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Henriques I., Araujo S., Pereira A., Menezes-Oliveira V.B., Correia A., Soares A.M.V.M., Scott-Fordsmand J.J., Amorim M.J.B. (2015) Combined effect of temperature and copper pollution on soil bacterial community: Climate change and regional variation aspects.
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 111
153-159.
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Trindade F., Amado F., da Costa J.P., Ferreira R., Maia C., Henriques I., Colaco B., Vitorino R. (2015) Salivary peptidomic as a tool to disclose new potential antimicrobial peptides.
JOURNAL OF PROTEOMICS, 115
49-57.
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Tacao M., Correia A., Henriques I.S. (2015) Low Prevalence of Carbapenem-Resistant Bacteria in River Water: Resistance Is Mostly Related to Intrinsic Mechanisms.
MICROBIAL DRUG RESISTANCE, 21
, (5), 497-506.
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Pereira S.I.A., Pires C., Henriques I., Correia A., Magan N., Castro P.M.L. (2015) Assessment of rhizospheric culturable bacteria of Phragmites australis and Juncus effusus from polluted sites.
JOURNAL OF BASIC MICROBIOLOGY, 55
, (10), 1179-1190.
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Tacão M., Moura A., Correia A., Henriques I. (2014) Co-resistance to different classes of antibiotics among ESBL-producers from aquatic systems.
Water Research, 48
100-107.
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Araújo S., Henriques I.S., Leandro S.M., Alves A., Pereira A., Correia A. (2014) Gulls identified as major source of fecal pollution in coastal waters: a microbial source tracking study.
Science Of The Total Environment, 470-471
84-91.
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Santos A.L., Baptista I., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha Â. (2014) Contribution of chemical water properties to the differential responses of bacterioneuston and bacterioplankton to ultraviolet-B radiation.
FEMS Microbiology Ecology, 87
, (2), 517-535.
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Cruz A., Henriques I., Sousa A.C.A., Baptista I., Almeida A., Takahashi S., Tanabe S., Correia A., Suzuki S., Anselmo A.M., Mendo S. (2014) A microcosm approach to evaluate the degradation of tributyltin (TBT) by Aeromonas molluscorum Av27 in estuarine sediments.
ENVIRONMENTAL RESEARCH, 132
430-437.
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Moura A., Araujo S., Alves M.S., Henriques I., Pereira A., Correia A.C.M. (2014) The contribution of Escherichia coli from human and animal sources to the integron gene pool in coastal waters.
FRONTIERS IN MICROBIOLOGY, 5
.
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Alves M.S., Pereira A., Araujo S.M., Castro B.B., Correia A.C.M., Henriques I. (2014) Seawater is a reservoir of mult-resistant Escherichia coli, including strains hosting plasmid-mediated quinolones resistance and extended-spectrum beta-lactarnases genes.
FRONTIERS IN MICROBIOLOGY, 5
.
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Chouchani C., Marrakchi R., Henriques I., Correia A. (2013) Occurrence of IMP-8, IMP-10, and IMP-13 metallo- beta -lactamases located on class 1 integrons and other extended-spectrum beta-lactamases in bacterial isolates from Tunisian rivers.
Scandinavian Journal Of Infectious Diseases, 45
, (2), 95-103.
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Azevedo J.S.N., Araújo S., Oliveira C.S., Correia A., Henriques I. (2013) Analysis of antibiotic resistance in bacteria isolated from the surface microlayer and underlying water of an estuarine environment.
Microbial Drug Resistance, 19
64-71.
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Santos A.L., Oliveira V., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2013) Wavelength Dependence of Biological Damage Induced by UV Radiation on Bacteria.
Archives Of Microbiology, 195
, (1), 63-74.
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Azevedo J.N.S., Correia A., Henriques I. (2013) Molecular analysis of the diversity of genus Psychrobacter present within a temperate estuary.
FEMS Microbiology Ecology, 84
451-460.
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Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2013) Role of Transition Metals in UV-B Induced Damage to Bacteria.
Photochemistry And Photobiology, 89
, (3), 640-648.
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Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2013) Growth conditions influence UVB sensitivity and oxidative damage in an estuarine bacterial isolate.
Photochemical & Photobiological Sciences, 12
974-986.
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Pereira A., Santos A., Tacão M., Alves A., Henriques I., Correia A. (2013) Genetic diversity and antimicrobial resistance of Escherichia coli from Tagus estuary (Portugal).
Science Of The Total Environment, 461
65-71.
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Oliveira C.S, Moura A., Henriques I., Brown C.J., Rogers L.M., Top E.M., Correia A. (2013) Comparative genomics of IncP-1 epsilon plasmids from water environments reveals diverse and unique accessory genetic elements.
Plasmid, 70
, (3), 412–419.
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Tacão M, Correia A., Henriques I. (2013) Environmental Shewanella xiamenensis Strains That Carry bla(OXA-48) or bla(OXA-204) Genes: Additional Proof for bla(OXA-48-Like) Gene Origin.
Antimicrobial Agents And Chemotherapy, 57
6399-6400.
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Santos A.L., Moreirinha C., Lopes D., Esteves A.C., Henriques I., Almeida A., Domingues M.R.M., Delgadillo I., Correia A., Cunha A. (2013) Effects of UV Radiation on the Lipids and Proteins of Bacteria Studied by Mid-Infrared Spectroscopy.
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 47
, (12), 6306-6315.
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Martins G., Henriques I., Ribeiro D.C., Correia A., Bodelier P.L.E., Cruz J.V., Brito A.G., Nogueira R. (2012) Bacterial diversity and geochemical profiles in sediments from eutrophic Azorean lakes.
Geomicrobiology Journal, 29
704-715.
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Moura A., Pereira C., Henriques I., Correia A. (2012) Novel gene cassettes and integrons in bacteria isolated from an urban wastewater treatment plant.
Research In Microbiology, 163
, (2), 92–100.
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Oliveira C.S., Lázaro B., Azevedo J.N., Henriques I., Almeida A., Correia A. (2012) New Molecular Variants of Epsilon and Beta IncP-1 Plasmids are Present in Estuarine Waters.
Plasmid, 67
252-258.
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Azevedo J.S.N., Ramos I., Araújo S., Oliveira C.S., Correia A., Henriques I. (2012) Spatial and temporal analysis of estuarine bacterioneuston and bacterioplankton using culture-dependent and culture-independent methodologies.
Antonie Van Leeuwenhoek, 101
819-835.
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Santos A.L., Oliveira V., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2012) Effects of UV-B Radiation on the Structural and Physiological Diversity of Bacterioneuston and Bacterioplankton.
Applied And Environmental Microbiology, 78
, (6), 2066-2069.
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Santos A.L., Lopes S., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia, A., Cunha A.L. (2012) The UV Responses of Bacterioneuston and Bacterioplankton Isolates Depend on the Physiological Condition and Involve a Metabolic Shift.
FEMS Microbiology Ecology, 80
, (3), 646-658.
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Moura A., Oliveira C., Henriques I., Smalla K., Correia A. (2012) Broad diversity of conjugative plasmids in integron-carrying bacteria from wastewater environments.
FEMS Microbiology Letters, 330
, (2), 157-164.
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Cleary D.F.R., Oliveira V., Gomes N.C.M., Pereira A. , Henriques I., Marques B., Almeida A., Cunha A., Correia A., Lillebø A.I. (2012) Impact of sampling depth and plant species on local environmental conditions, microbiological parameters and bacterial composition in a mercury contaminated salt marsh.
Marine Pollution Bulletin, 64
, (2), 263-271.
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Tacão M., Correia A., Henriques I. (2012) Resistance to broad-spectrum antibiotics in aquatic systems: anthropogenic activities modulate the dissemination of blaCTX-M-like genes.
Applied And Environmental Microbiology, 78
4134-4140.
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Henriques I., Araújo S., Azevedo J.S.N., Alves M.S., Chouchani C., Pereira A., Correia A. (2012) Prevalence and diversity of carbapenem-resistant bacteria in untreated drinking water in Portugal.
Microbial Drug Resistance, 18
531-537.
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Moura A., Jové T., Ploy M.C., Henriques I., Correia A. (2012) Diversity of gene cassette promoters in class 1 integrons from wastewater environments.
Applied And Environmental Microbiology, 78
, (15), 5413-5416.
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Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2012) Contribution of reactive oxygen species to UV-B-induced damage in bacteria.
Journal Of Photochemistry And Photobiology B: Biology, 117
40-46.
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Correia A., Henriques I., Tacão M. (2012) Carbapenem-resistant bacteria in river water.
Salud I Ciencia, 19
452-454.
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Matos A., Borges M.T., Peixe C., Henriques I., Pereira C.M., Castro P.M.L. (2011) Molecular and multivariate approach to the microbial community of a commercial shallow-raceway-marine recirculation system operating with a Moving Bed Biofilter.
Aquaculture Research, 42
, (9), 1308-1322.
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Santos A.L., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2011) Effects of ultraviolet radiation on the abundance, diversity and activity of bacterioneuston and bacterioplankton: insights from microcosm studies.
Aquatic Sciences - Research Across Boundaries, 73
, (1), 63-77.
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Santos A.L., Lopes S., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2011) Diversity in UV-Sensitivity and Recovery Potential among Bacterioneuston and Bacterioplankton Isolates.
Letters In Applied Microbiology, 52
, (4), 360-366.
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Calhau V., Tacão M., Morgado F., Correia A., Henriques I. (2010) PCR–DGGE-based methodologies to assess diversity and dynamics of Aeromonas communities.
Journal Of Applied Microbiology, 108
608-623.
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Moura A., Henriques I., Smalla K., Correia A. (2010) Wastewater bacterial communities bring together broad-host range plasmids, integrons and a wide diversity of uncharacterized gene cassettes.
Research In Microbiology, 161
58-66.
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Moura A., Tacão M., Henriques I., Dias J., Ferreira P., Correia A. (2009) Characterization of bacterial diversity in two aerated lagoons of a wastewater treatment plant using PCR-DGGE analysis.
Microbiological Research, 164
560-569.
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Calheiros C., Duque A., Moura A., Henriques I., Correia A., Rangel A., Castro P. (2009) Substrate effect on bacterial communities from constructed wetlands planted with Typha latifolia treating industrial wastewater.
Ecological Engineering, 35
744-753.
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Moura A., Soares M., Pereira C., Leitão N., Henriques I., Correia A. (2009) INTEGRALL: a database and search engine for integrons, integrases and gene cassettes.
Bioinformatics, 25
1096–1098.
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Calheiros C., Duque A., Moura A., Henriques I., Correia A., Rangel A., Castro P. (2009) Bacterial community dynamics in two-stage constructed wetlands with different plants for industrial wastewater treatment.
Bioresource Technology, 100
3228-3235.
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Santos A.L., Mendes C., Gomes N.C.M., Henriques I., Correia A., Almeida A., Cunha A. (2009) Short-term variability of abundance, diversity and activity of estuarine bacterioneuston and bacterioplankton.
Journal Of Plankton Research, 31
, (12), 1545-1555.
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Henriques I., Fonseca F., Alves A., Saavedra M. J., Correia A. (2008) Tetracycline-resistance genes in Gram-negative isolates from estuarine waters.
Letters In Applied Microbiology, 47
526-533.
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Albano H., Henriques I., Correia A., Hogg T., Teixeira P. (2008) Characterization of microbial population of “Alheira” (a traditional portuguese fermented sausage) by PCR-DGGE and traditional cultural microbiological methods.
Journal Of Applied Microbiology, 105
2187-2194.
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de Figueiredo D.R., Pereira M.J., Moura A., Silva L., Bárrios S., Fonseca F., Henriques I., Correia A. (2007) Bacterial community composition over a dry winter in meso- and eutrophic Portuguese water bodies.
FEMS Microbiol Ecol, 59
, (3), 638–650.
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Alves A., Phillips A.J.L., Henriques I., Correia A. (2007) Rapid differentiation of species of Botryosphaeriaceae by PCR fingerprinting.
Res Microbiol, 158
112-121.
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Moura A., Henriques I., Ribeiro R., Correia A. (2007) Prevalence and characterization of integrons from bacteria isolated from a slaughterhouse wastewater treatment plant.
Journal Of Antimicrobial Chemotherapy, 60
1243–1250.
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Fonseca F., Sarmento A. C., Henriques I,, Samyn B., van Beeumen J., Domingues P., Domingues M. R., Saavedra M. J., Correia A. (2007) Biochemical characterization of SFC-1, a class A carbapenem- hydrolyzing beta-lactamase.
Antimicrobial Agents And Chemotherapy, 51
4512-4514.
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Emanuelsson M.A.E., Henriques I., Jorge R.M.F., Castro P.M.L. (2006) Biodegradation of 2-fluorobenzoate in up-flow fixed bed bioreactors operated with different growth support materials.
Journal Of Chemical Technology And Biotechnology ,
, (81), 1577-1585.
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Carvalho M.F., Ferreira J.R., Pacheco C.C., De Marco P., Henriques I., Correia A., Castro P.M.L. (2006) Long term performance and microbial dynamics of an up-flow fixed bed reactor established for the biodegradation of fluorobenzene.
Applied Microbiology And Biotechnology ,
, (71), 555-562.
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Henriques I., Alves A., Tacão M., Almeida A., Cunha A., Correia A. (2006) Genetic diversity and dynamics of free-living bacterial community along an estuarine gradient (Ria de Aveiro, Portugal).
Estuarine Coastal And Shelf Science ,
, (68), 139-148.
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Henriques I., Moura A., Alves A., Saavedra M.J., Correia A. (2006) Analysing diversity among beta-lactamase encoding genes in aquatic environments.
FEMS Microbiology Ecology,
, (56), 418-429.
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Henriques I., Fonseca F., Alves A., Saavedra M.J., Correia A. (2006) Ocurrence and diversity of integrons and beta-lactamase genes among ampicillin-resistant isolates from estuarine waters.
Research In Microbiology,
, (157), 938-947.
See more
Alves A., Phillips A.J.L., Henriques I., Correia A. (2005) Evaluation of Amplified Ribosomal DNA Restriction Analysis (ARDRA) as a method for the identification of Botryosphaeria species.
FEMS Microbiology Letters, 2
, (245), 221-229.
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Tacão M., Moura A., Alves A., Henriques I., Saavedra M.J., Correia A. (2005) Evaluation of 16S-rDNA- and gyrB-DGGE for typing members of the genus Aeromonas.
FEMS Microbiology Letters, 1
, (246), 11-18.
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Henriques I ., Almeida A., Cunha A., Correia A. (2004) Molecular sequence analysis of prokariotic diversity in the micdle and outer sections of the Portuguese estuary Ria de Aveiro.
FEMS Microbiology Ecology,
, (49), 269-279.
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Alves A., Henriques I., Fragoeiro S., Santos C., Phillips A.J.L., Correia A. (2004) Applicability of rep-PCR genomic fingerprinting to molecular discrimination of members of the genera Phaeoacremonium and Phaeomoniella.
Plant Pathology, 5
, (53), 629-634.
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Henriques I., Moura A., Alves A., Saavedra M. J., Correia A. (2004) Molecular characterization of a novel class a beta-lactamase, SFC-1, from Serratia fonticola UTAD54.
Antimicrobial Agents And Chemotherapy ,
, (48), 2321-2324.
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Saavedra M.J., Peixe L., Sousa J.C., Henriques I., Alves A., Correia A. (2003) Sfh-I, a subclass B2 metallo-beta-lactamase from a Serratia fonticola environmental isolate.
Antimicrobial Agents And Chemotherapy , 7
, (47), 2330-2333.
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Alves A., Santos O., Henriques I., Correia A. (2002) Evaluation of methods for molecular typing and identification of members of the genus Brevibacterium and other related species.
FEMS Microbiology Letters, 2
, (213), 205-211.
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Mendo, S., Henriques I., Correia A., Duarte J.M. (2000) Genetic characterization of a new thermotolerant Bacillus licheniformis strain.
Current Microbiology ,
, (40), 137-139.
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Dias M.F., de Castro G.M., de Paiva M.C., Reis M.D., Facchin S., do Carmo A.O., Alves M.S., Suhadolnik M.L., Motta A.D., Henriques I., Kalapothakis E., Lobo F.P., Nascimento A.M.A. Exploring antibiotic resistance in environmental integron-cassettes through intI-attC amplicons deep sequencing.
BRAZILIAN JOURNAL OF MICROBIOLOGY,
.
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Isabel Henriques
Assistant Professor
- Author Name : Henriques I.
- Researcher ID: B-1667-2008
- ORCID: 0000-0001-7717-4939
- Ciencia ID: F516-BFA6-1588
- Department: Department of Life Sciences - University of Coimbra
- Research Group: Stress Biology (SB)
- ISI Web of KnowledgeSM search factor: AU=(Henriques I) and AD=(Aveiro)
Research interests
Antibiotic resistance in microbial strains and microbial communities;
Dissemination of antibiotic resistance genetic determinants in aquatic environments;
Mobile Genetic Elements;
Diversity of complex microbial communities;
Microbiome and its impact on organisms functions.
Dissemination of antibiotic resistance genetic determinants in aquatic environments;
Mobile Genetic Elements;
Diversity of complex microbial communities;
Microbiome and its impact on organisms functions.
Academic degrees
PhD in Biology, University of Aveiro, September 2006
Master in Molecular Microbioloy, University of Aveiro, July 2001
Degree in Biology, University of Aveiro, July 1997
Master in Molecular Microbioloy, University of Aveiro, July 2001
Degree in Biology, University of Aveiro, July 1997
Scientific activities
2019-present Director of the PhD program in Biosciences, Department of Life Sciences, University of Coimbra.
2016-present Coordinator of the Microbial & Cell Biology Lab at the Centre for Environmental and Marine Studies, University of Aveiro.
2018 Member of the Scientific Council of the University of Aveiro
2017-2018 Director of the MSc in Microbiology, Biology Department, University of Aveiro.
2016-2017 Member of the coordination board of the MSc in Microbiology, Biology Department, University of Aveiro.
2017-2018 Coordinator of the Environmental Biology & Health (EBH) thematic line, at the Centre for Environmental and Marine Studies, University of Aveiro.
2016-2018 Coordinator of the Microbial & Cell Biology Lab at the Centre for Environmental and Marine Studies, University of Aveiro.
Career:
CURRENT POSITION: Assistant Professor, Department of Life Sciences, Faculty of Science and Technology, University of Coimbra
2014-2018: Assistant Researcher (Investigator FCT), CESAM (and iBiMED from 2014-2016), University of Aveiro.
2013: Assistant Researcher (QREN), CESAM, UNiversity of Aveiro
2006 to 2013: PostDoc Grant, Fundação para a Ciência e a Tecnologia - SFRH/BPD/63487/2009.
2007 to 2013: Invited Auxiliar Professor at the Department of Biology, University of Aveiro
2002 to 2006: PhD Grant, Fundação para a Ciência e a Tecnologia - SFRH/BD/5275/2001– April.
2001 to 2002: PhD Grant, University of Aveiro. 1998 to 2000: Master Grant, University of Aveiro .
2016-present Coordinator of the Microbial & Cell Biology Lab at the Centre for Environmental and Marine Studies, University of Aveiro.
2018 Member of the Scientific Council of the University of Aveiro
2017-2018 Director of the MSc in Microbiology, Biology Department, University of Aveiro.
2016-2017 Member of the coordination board of the MSc in Microbiology, Biology Department, University of Aveiro.
2017-2018 Coordinator of the Environmental Biology & Health (EBH) thematic line, at the Centre for Environmental and Marine Studies, University of Aveiro.
2016-2018 Coordinator of the Microbial & Cell Biology Lab at the Centre for Environmental and Marine Studies, University of Aveiro.
Career:
CURRENT POSITION: Assistant Professor, Department of Life Sciences, Faculty of Science and Technology, University of Coimbra
2014-2018: Assistant Researcher (Investigator FCT), CESAM (and iBiMED from 2014-2016), University of Aveiro.
2013: Assistant Researcher (QREN), CESAM, UNiversity of Aveiro
2006 to 2013: PostDoc Grant, Fundação para a Ciência e a Tecnologia - SFRH/BPD/63487/2009.
2007 to 2013: Invited Auxiliar Professor at the Department of Biology, University of Aveiro
2002 to 2006: PhD Grant, Fundação para a Ciência e a Tecnologia - SFRH/BD/5275/2001– April.
2001 to 2002: PhD Grant, University of Aveiro. 1998 to 2000: Master Grant, University of Aveiro .
Publications
WoS Papers
(128)
Other Papers
(4)
Books
(0)
Book Chapter
(2)
Thesis
(5)
Communications
(157)
Other Publications
(4)
Reports
(1)
Projects
In Progress (0)
Concluded (17)
REDEEM - Resilience of anthozoan corals to deep-sea mining, an holobiontic approach
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MICROCLIM - Effects of global warming on microbial populations from contaminated agricultural soils in the area of Estarreja
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GReAT - Granular microalgae-bacterial sludge for aquaculture wastewater treatment
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METOXCLIM - Metal contamination in a global warming perspective: effects on soil properties and relation with toxicity changes
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Impact of phytoremediation processes on bacterial communities from Pb and Cd contaminated soils
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GLOBALTOX: Toxicity of anthropogenic multi-stressed soils under a global warming perspective
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ARTEMan: Transferência de resistência a antibióticos entre o Ambiente e o Homem
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StARE - Stopping Antibiotic Resistance Evolution
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REFRESH – Minimizing microbial hazards in vegetables cultivated in the Estarreja municipality
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ARISKA - Antibiotic resistance in the Antuã River: assessing risks to public health
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MICRONEMA - Spatial and temporal analysis of microbial community in Pine Wilt Disease
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PhytoMarsh - The phytosphere of salt-marsh plants: an underexplored microbial hot-spot
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SEAGULL- Identification of nonpoint sources of faecal pollution in a natural environment: contributing data for risk assessment
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TBTRESENSE: Tributiyltin (TBT) bioremediation and development of a biosensor to detect TBT from contaminated sites.
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FUBIA: Soil Function-Biodiversity relationship And regional variation
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MARMER: The role of salt marsh plants on mercury cycle. Identifying plant-bacteria-Hg interactions critical for ecosystem remediation
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Isolation and Characterization of the genes involved in TBT resistance in marine bacteria
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Scientific Supervision
In progress
(2)
Concluded
(32)
PhD (Main Supervisor):
Rafael Tavares
(CESAM member)
PhD (Main Supervisor):
Isabel Alexandre Teixeira da Silva
(CESAM member)
Master (Main Supervisor):
Maria Vendas
(not a CESAM member)
Master (Main Supervisor):
Pedro Teixeira
(not a CESAM member)
Master (Main Supervisor):
Marta Salgueiro Alves
(ex-CESAM member)
Master (Main Supervisor):
Diana Salvador de Sá Dias
(not a CESAM member)
Master (Main Supervisor):
Tatiana Deolinda Santos Teixeira Silva
(not a CESAM member)
Master (Main Supervisor):
Susana Manso Araújo
(ex-CESAM member)
Master (Main Supervisor):
Carla Sá
(not a CESAM member)
Master (Main Supervisor):
Vera Calhau
(not a CESAM member)
Master (Main Supervisor):
Isabel Ramos
(not a CESAM member)
Master (Co-supervisor):
Helena Lopes
(not a CESAM member)
Master (Co-supervisor):
Ana Margarida Coito
(not a CESAM member)
Master (Co-supervisor):
Diogo Pinho
(ex-CESAM member)
Master (Co-supervisor):
Ana Rodrigues
(not a CESAM member)
Master (Co-supervisor):
Carlos Correia
(not a CESAM member)
Master (Co-supervisor):
Sandra Neto
(not a CESAM member)
Master (Co-supervisor):
Cristina Carvalho
(not a CESAM member)
Master (Co-supervisor):
Eliana Marisa dos Santos Cavaleiro
(ex-CESAM member)
PhD (Main Supervisor):
Pedro Filipe Teixeira
(ex-CESAM member)
PhD (Main Supervisor):
Marta Salgueiro Alves
(ex-CESAM member)
PhD (Main Supervisor):
Susana Manso Araújo
(ex-CESAM member)
PhD (Main Supervisor):
Patrícia Alexandra Nunes de Matos
(CESAM member)
PhD (Main Supervisor):
Patrícia Alexandra Nunes de Matos
(CESAM member)
PhD (Main Supervisor):
Ana Rita Almeida
(ex-CESAM member)
PhD (Main Supervisor):
Sara Peixoto
(CESAM member)
PhD (Co-supervisor):
Cátia Isabel Assis Fidalgo
(CESAM member)
PhD (Co-supervisor):
Marta Tacão
(CESAM member)
PhD (Co-supervisor):
Juliana Simão Nina de Azevedo
(ex-CESAM member)
PhD (Co-supervisor):
Nádia Osório
(ex-CESAM member)
PhD (Co-supervisor):
Jaqueline Rocha
(ex-CESAM member)
Post-doc (Main Supervisor):
Marta Tacão
(CESAM member)
Post-doc (Main Supervisor):
Catarina Raquel Leite Amorim
(ex-CESAM member)
Post-doc (Co-supervisor):
Jacinta M M Oliveira
(ex-CESAM member)
CESAM Funding: UIDP/50017/2020 + UIDB/50017/2020 + LA/P/0094/2020
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