Almeida J.F., Marques M., Oliveira V., Egas C., Mil-Homens D., Viana R., Cleary D.F.R., Huang Y.M., Fialho A.M., Teixeira M.C., Gomes N.C.M., Costa R., Keller-Costa T. (2023) Marine Sponge and Octocoral-Associated Bacteria Show Versatile Secondary Metabolite Biosynthesis Potential and Antimicrobial Activities Against Human Pathogens.
Marine Drugs, 21
, (1), 34.
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Boaventura J., Caetano T., Mendo S., Cleary DFR., Gomes NCM., Oliveira V (2022) Draft Genome Sequence of Vibrio mediterranei Strain CyArs1.
Microbiology Resource Announcements,
e00155-22.
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Sena C, Parkhurst DL, Tepley ||| FJ, Jiang F, van der Land C, Coelho FJ, Oliveira V, Lever MA, Ishizuka O and Arculus R (2022) Formation of calcium chloride brines in volcaniclastic-rich sediments.
Frontiers In Earth Science, 10
.
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Oliveira V., Polónia A.R.M., Cleary D.F.R., Huang Y.u.s.h.e.n.g. .M., de Voogd N.J., Keller-Costa T., Costa R., Gomes N.C.M. (2022) Assessing the genomic composition, putative ecological relevance and biotechnological potential of plasmids from sponge bacterial symbionts.
Microbiological Research, 265
.
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Sousa, J. M. G., Louvado, A., Coelho, F. J. R. C., Oliveira, V., Oliveira, H., Cleary, D. F. R., Gomes, N. C. M. (2022) In vitro study of the modulatory effects of heat-killed bacterial biomass on aquaculture bacterioplankton communities.
Scientific Reports,
1-13.
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Barcelos e Ramos J., Ribeiro S.C., Schulz K.G., Coelho F.J.R.C., Oliveira V., Cunha A., Gomes N.C.M., Brownlee C., Passow U., de Azevedo E.B. (2022) Emiliania huxleyi—Bacteria Interactions under Increasing CO2 Concentrations.
Microorganisms, 10
, (12), 2461.
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Oliveira V., Polonia A.R.M., Cleary D.F.R., Huang Y.S.M., de Voogd N.J., da Rocha U.N., Gomes N.C.M. (2021) Characterization of putative circular plasmids in sponge-associated bacterial communities using a selective multiply-primed rolling circle amplification.
MOLECULAR ECOLOGY RESOURCES, 21
, (1), 110-121.
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Domingues P.M., Oliveira V., Serafim L.S., Gomes N.C.M., Cunha A. (2020) Biosurfactant Production in Sub-Oxic Conditions Detected in Hydrocarbon-Degrading Isolates from Marine and Estuarine Sediments.
INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 17
, (5), .
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Oliveira, V., Martins, P., Marques, B., Cleary, D.F.R., Lillebø, A.I., Calado, R. (2020) Aquaponics using a fish farm effluent shifts bacterial communities profile in halophytes rhizosphere and endosphere.
Scientific Reports, 10
.
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Pires, ACC, Oliveira, V, Cleary, DFR, Polónia AR, Coelho, FJRC, Waheed, Z, de Voogd, NJ, Gomes, NCM (2020) Bacterial composition and putative functions associated with sponges, sediment and seawater from the Tioman coral reef system, Peninsular Malaysia.
Marine Biology Research, 16
729-743.
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Pires A.C.C., Cleary D.F.R., Polonia A.R.M., Lim S.C., De Voogd N.J., Oliveira V., Gomes N.C.M. (2019) Comparison of bacterial communities associated with Xestospongia testudinaria, sediment and seawater in a Singaporean coral reef ecosystem.
JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM, 99
, (2), 331-342.
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Duarte L.N., Coelho F.J.R.C., Oliveira V., Cleary D.F.R., Martins P., Gomes N.C.M. (2019) Characterization of bacterioplankton communities from a hatchery recirculating aquaculture system (RAS) for juvenile sole (Solea senegalensis) production.
PLOS ONE, 14
, (1), .
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Louvado A., Coelho F.J.R.C., Oliveira V., Gomes H., Cleary D.F.R., Simoes M.M.Q., Cunha A., Gomes N.C.M. (2019) Microcosm evaluation of the impact of oil contamination and chemical dispersant addition on bacterial communities and sediment remediation of an estuarine port environment.
JOURNAL OF APPLIED MICROBIOLOGY, 127
, (1), 134-149.
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Cleary D.F.R., Coelho F.J.R.C., Oliveira V., Gomes N.C.M., Polonia A.R.M. (2017) Sediment depth and habitat as predictors of the diversity and composition of sediment bacterial communities in an inter-tidal estuarine environment.
Marine Ecology, 38
, (2), -e12411.
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Oliveira V., Gomes N.C.M., Santos M., Almeida A., Lillebo A.I., Ezequiel J., Serodio J., Silva A.M.S., Simoes M.M.Q., Rocha S.M., Cunha A. (2017) Effects of the Inoculant Strain Pseudomonas sp SPN31 nah (+) and of 2-Methylnaphthalene Contamination on the Rhizosphere and Endosphere Bacterial Communities of Halimione portulacoides.
CURRENT MICROBIOLOGY, 74
, (5), 575-583.
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Coelho F.J.R.C., Cleary D.F.R., Costa R., Ferreira M., Polonia A.R.M., Silva A.M.S., Simoes M.M.Q., Oliveira V., Gomes N.C.M. (2016) Multitaxon activity profiling reveals differential microbial response to reduced seawater pH and oil pollution.
MOLECULAR ECOLOGY, 25
, (18), 4645-4659.
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Hentati, O., Oliveira, V., Sena, C., Bouji, M.S.M., Wali, A., Ksibi, M. (2016) Soil contamination with olive mill wastes negatively affects microbial communities, invertebrates and plants.
Ecotoxicology, 25
, (8), 1500-1513.
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Oliveira V., Gomes N.C.M., Almeida A., Silva A.M.S., Silva H., Cunha A. (2015) Microbe-Assisted Phytoremediation of Hydrocarbons in Estuarine Environments.
MICROBIAL ECOLOGY, 69
, (1), 1-12.
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Coelho F.J.R.C., Cleary D.F.R., Rocha R.J.M., Calado R., Castanheira J.M., Rocha S.M., Silva A.M.S., Simoes M.M.Q., Oliveira V., Lillebo A.I., Almeida A., Cunha A., Lopes I., Ribeiro R., Moreira-Santos M., Marques C.R., Costa R., Pereira R., Gomes N.C.M. (2015) Unraveling the interactive effects of climate change and oil contamination on laboratory-simulated estuarine benthic communities.
GLOBAL CHANGE BIOLOGY, 21
, (5), 1871-1886.
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Oliveira V, Silva A, Marques B, Almeida A, Gomes NCM, Lillebø A, Cunha A (2015) Microcosm assessment of the effect of an acute mercury contamination event on the structure and activity of sediment bacterial communities.
Applied Microbiology - Open Access, 1:102
.
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Oliveira V., Gomes N.C.M., Almeida A., Silva A.M.S., Simoes M.M.Q., Smalla K., Cunha A. (2014) Hydrocarbon contamination and plant species determine the phylogenetic and functional diversity of endophytic degrading bacteria.
Molecular Ecology, 23
, (6), 1392-1404.
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Oliveira V., Gomes N.C.M., Cleary D.F.R., Almeida A., Silva A.M.S., Simoes M.M.Q., Silva H., Cunha A. (2014) Halophyte plant colonization as a driver of the composition of bacterial communities in salt marshes chronically exposed to oil hydrocarbons.
FEMS MICROBIOLOGY ECOLOGY, 90
, (3), 647-662.
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Domingues P.M., Louvado A., Oliveira V., Coelho F.J., Almeida A., Gomes N.C.M., Cunha A. (2013) Selective cultures for the isolation of biosurfactant producing bacteria: comparison of environmental inocula and hydrophobic carbon sources.
Preparative Biochemistry & Biotechnology, 43
, (3), 237-55.
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Santos A.L., Oliveira V., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2013) Wavelength Dependence of Biological Damage Induced by UV Radiation on Bacteria.
Archives Of Microbiology, 195
, (1), 63-74.
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Cruz A., Oliveira V., Baptista I., Almeida A., Cunha A., Suzuki S., Mendo S. (2012) Effect of tributyltin (TBT) in the metabolic activity of TBT-resistant and sensitive estuarine bacteria.
Environmental Toxicology, 27
, (1), 11-17.
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Cleary D.F.R., Oliveira V., Gomes N.C.M., Pereira A. , Henriques I., Marques B., Almeida A., Cunha A., Correia A., Lillebø A.I. (2012) Impact of sampling depth and plant species on local environmental conditions, microbiological parameters and bacterial composition in a mercury contaminated salt marsh.
Marine Pollution Bulletin, 64
, (2), 263-271.
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Oliveira V., Santos A.L., Aguiar C., Santos L., Salvador A.C., Gomes N.C.M., Silva H., Rocha S.M., Almeida A., Cunha A. (2012) Prokaryotes in salt marsh sediments of Ria de Aveiro: effects of halophyte vegetation on abundance and diversity.
Estuarine, Coastal And Shelf Science, 110
61-68.
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Santos A.L., Oliveira V., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2012) Effects of UV-B Radiation on the Structural and Physiological Diversity of Bacterioneuston and Bacterioplankton.
Applied And Environmental Microbiology, 78
, (6), 2066-2069.
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Oliveira V., Santos A.L., Coelho F., Gomes N.C.M., Silva H., Almeida A., Cunha A. (2010) Effects of monospecific banks of salt marsh vegetationon sediment bacterial communities.
Microbial Ecology, 60
, (1), 167–179.
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Vanessa Jesus Oliveira
Investigadora Doutorada (nível 1)
- Researcher ID: K-4593-2014
- ORCID: 0000-0003-4223-0851
- Ciencia ID: DC15-CF77-2324
- Departamento: Biologia
- Grupo de Investigação: Coastal and Deep-Ocean Ecology & Conservation (CDEC)
- ISI Web of KnowledgeSM search factor: Author: (Oliveira V) AND Author: (Oliveira, V) AND Author: (Oliveira, V.) AND Address: (CESAM)
Interesses de investigação
1) Environmental Microbiology; Microbial Ecology; Molecular Biology
2) Investigation of marine microbial symbionts to search for novel compounds including biocatalysts and antibiotics.
3) Bacterial biodegradation of pollutants and microbe enhanced phytorremediation.
4) Bioinformatics and metagenomic based analysis
2) Investigation of marine microbial symbionts to search for novel compounds including biocatalysts and antibiotics.
3) Bacterial biodegradation of pollutants and microbe enhanced phytorremediation.
4) Bioinformatics and metagenomic based analysis
Graus académicos
2014 – PhD in Biology, Specialization in Microbiology by the Aveiro University.
2008 – Master in Microbiology by the University of Aveiro (final classification of 16).
2007 – 4 years degree in Biology by the University of Aveiro (final classification of 15).
2008 – Master in Microbiology by the University of Aveiro (final classification of 16).
2007 – 4 years degree in Biology by the University of Aveiro (final classification of 15).
Atividades científicas
POSITIONS
- 2020 - (present): Invited Auxiliar Professor, University of Aveiro
- January 2019 - Present: Junior researcher, CESAM & Department of Biology, University of Aveiro, Portugal (Contract Researcher under Decree-Law 57/2016 Art.23rd - Transitional Rule).
- Postdoctoral researcher, February 2015 – December 2018: CESAM & Department of Biology, University of Aveiro, Portugal.
- Invited Auxiliar Professor (30%): Department of Biology, University of Aveiro, Portugal.
- Promoter in Biotechnology project, January 2013 - December 2014 (supported by government program “Passaporte para o Empreendedorismo”).
- PhD student, November 2009 - October 2014: CESAM & Department of Biology, University of Aveiro, Portugal.
- Scholarship research grant, November 2008 - October 200: Research project (PTDC/MAR/67752/2006), Department of Chemistry, University of Aveiro, Portugal.
- MSc student, September 2007- December 2008: Department of Biology, University of Aveiro, Portugal.
TRAINING ACTIVITY
- July 2018 – Participation in Metagenomics Bioinformatics 2018 course conducted by the European Bioinformatics Institute EMBL-EBI; Cambridge, UK.
- November/December 2015 – Short Term Scientific Mission (STSM), in the frame of e-COST Action FLOWS (ES1301), under the supervision of Dr. Mark Lever, ETH Zurich, to learn innovative techniques in molecular biology (sequencing) and to produce new datasets from the deep-sea sediment samples that were brought from Expedition 351 of the International Ocean Discovery Program (IODP).
- Setember/October 2010 – Short-term stay in Julius Kühn-Institut, Braunschweig, Germany, to learn techniques relating to the detection and characterization of plasmids from endophytic bacteria capable of hydrocarbon degradation, under the supervision of Dr Kornelia Smalla
- 2020 - (present): Invited Auxiliar Professor, University of Aveiro
- January 2019 - Present: Junior researcher, CESAM & Department of Biology, University of Aveiro, Portugal (Contract Researcher under Decree-Law 57/2016 Art.23rd - Transitional Rule).
- Postdoctoral researcher, February 2015 – December 2018: CESAM & Department of Biology, University of Aveiro, Portugal.
- Invited Auxiliar Professor (30%): Department of Biology, University of Aveiro, Portugal.
- Promoter in Biotechnology project, January 2013 - December 2014 (supported by government program “Passaporte para o Empreendedorismo”).
- PhD student, November 2009 - October 2014: CESAM & Department of Biology, University of Aveiro, Portugal.
- Scholarship research grant, November 2008 - October 200: Research project (PTDC/MAR/67752/2006), Department of Chemistry, University of Aveiro, Portugal.
- MSc student, September 2007- December 2008: Department of Biology, University of Aveiro, Portugal.
TRAINING ACTIVITY
- July 2018 – Participation in Metagenomics Bioinformatics 2018 course conducted by the European Bioinformatics Institute EMBL-EBI; Cambridge, UK.
- November/December 2015 – Short Term Scientific Mission (STSM), in the frame of e-COST Action FLOWS (ES1301), under the supervision of Dr. Mark Lever, ETH Zurich, to learn innovative techniques in molecular biology (sequencing) and to produce new datasets from the deep-sea sediment samples that were brought from Expedition 351 of the International Ocean Discovery Program (IODP).
- Setember/October 2010 – Short-term stay in Julius Kühn-Institut, Braunschweig, Germany, to learn techniques relating to the detection and characterization of plasmids from endophytic bacteria capable of hydrocarbon degradation, under the supervision of Dr Kornelia Smalla
Publicações
Artigos WoS
(29)
Outros artigos
(0)
Livros
(0)
Capítulo de Livro
(2)
Teses
(2)
Comunicações
(26)
Outras Publicações
(1)
Relatórios
(0)
Projetos
BlueComposite - Utilização de materiais compósitos de origem biológica para libertação controlada de moduladores microbianos químicos em sistemas de aquicultura de recirculação (RAS)
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ConTribuT - Conversão da tributirina em rações de truta arco-íris
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MAXIMUS.PT - Investigação e desenvolvimento para a produção de larvas e juvenis de pregado em maternidade
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4D-REEF-Past, present, and future of coral reefs in the Coral Triangle
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Symbioreactor - Sustainable Production of Bioactive Metabolites from Microbial Symbionts of Marine Sponges and Corals
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AquaHeal - Modulação microbiana em aquaculturas com sistema de recirculação: em direção de um sistema de produção supressor de doenças
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EcoTech-SPONGE- Estudo da ecologia, função e biotecnologia de plasmídeos originários de simbiontes microbianos em esponjas marinhas
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AQUASAFE - Desenvolvimento de novas tecnologias para antecipar e diagnosticar surtos de doenças na aquicultura
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MARMER: O papel das plantas de sapal no ciclo do mercúrio. Identificação das interacções planta-bactérias-Hg críticas para a remediação de ecossistemas (MARMER)
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Orientações científicas
Master (Co-orientador):
João Boaventura
(not a CESAM member)
final degree project (Co-orientador):
Gil Sousa
(not a CESAM member)
final degree project (Co-orientador):
Lúcia Roque
(not a CESAM member)
final degree project (Co-orientador):
Rosa Cirne
(not a CESAM member)
Financiamento do CESAM: UIDP/50017/2020 + UIDB/50017/2020 + LA/P/0094/2020
CESAM © 2023 | Todos os direitos reservados.
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