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  Artur Alves  
  Phone: +351 234 370766 (ext. 22733)  
  e-mail: artur.alves@ua.pt  
  Category: Principal Researcher  
  Department: Department of Biology  
  Research group: Stress Biology
 
ISI Web of KnowledgeSM search factor: AU=(Alves A) AND AD=(Aveiro NOT Dept Anim Prod) / ResearcherID=C-3645-2008  
  Direct URL for this page: http://www.cesam.ua.pt/aalves  
     
Academic degrees

Degree in Biology, University of Aveiro, 1998


MSc in Molecular Microbiology, University of Aveiro, 2001


PhD in Biology, University of Aveiro, 2006

Professional activity

since 01/01/2014 - Principal Researcher, Departamento de Biologia, CESAM (Investigador FCT)


01/07/2009 - 31/12/2013 - Assistant Researcher, Departamento de Biologia, CESAM (Ciência 2008)


2007 to 30/06/2009 - Invited Assistant Professor partial time (50%), Departamento de Biologia da Universidade de Aveiro


01/11/2006 to 30/06/2009 - Post-doctoral fellowship from FCT (SFRH/BPD/24509/2005)


2003-2006 - PhD fellowship from FCT (SFRH/BD/10389/2002 )


2001-2002 - PhD fellowship from UA


2000-2001 - MSc fellowship from FCT (SFRH/BM/419/2000 )


1998-1999 - MSc fellowship from UA

Research interests

Microbial diversity and evolution


Global changes and plant diseases


Microorganisms as biocontrol agents


Biotechnological potential of microorganisms        


Plant microbiology                             


Microbial interactions


 


 

COST Actions

Member of the management committee:


FA1303 - Sustainable control of grapevine trunk diseases http://managtd.eu/en/


FP1401 - A global network of nurseries as early warning system against alien tree pests (Global Warning) http://www.cost.eu/COST_Action.....


FP1406 - Pine pitch canker - strategies for management of Gibberella circinata in greenhouses and forests (PINESTRENGTH) http://www.cost.eu/COST_Action.....

Editor and reviewer activities

Editor:



  • SpringerPlus (june 2015 to december 2016)

  • European Journal of Plant Pathology (since august 2016)


Reviewer:



  • African Journal of Biotechnology

  • African Journal of Microbiology Research

  • Annals of Applied Biology

  • Antonie van Leeuwenhoek

  • Applied and Environmental Microbiology

  • Australasian Plant Disease Notes

  • Australasian Plant Pathology

  • BioResources

  • BMC Microbiology

  • Chiang Mai Journal of Science

  • Estuarine Coastal and Shelf Science

  • European Journal of Forest Research

  • European Journal of Plant Pathology

  • FEMS Microbiology Letters

  • Folia Microbiologica

  • Forests

  • Forest Pathology

  • Fungal Biology

  • Fungal Diversity

  • Fungal Ecology

  • iForest

  • International Journal of Molecular Sciences

  • International Journal of Plant & Soil Science

  • Journal of Microbiology

  • Journal of Phytopathology

  • Journal of Plant Pathology

  • Limnetica

  • Microbiological Research

  • MicrobiologyOpen

  • Molecular Plant-Microbe Interactions

  • Mycotaxon

  • Mycosphere

  • Persoonia

  • Phytopathologia Mediterranea

  • Phytoparasitica

  • Plant Disease

  • Plant Pathology

  • PLOS ONE

  • Research in Microbiology

  • SpringerPlus

  • Turkish Journal of Botany

Scientific Supervision
Post-doc (Main Supervisor): Ana Cristina Esteves
Post-doc (Co-supervisor): Jörg Christian Frommlet
Post-doc (Co-supervisor): Ana Teresa Luís
Post-doc (Co-supervisor): Glória Catarina Pinto

PhD (Co-supervisor): Paulo Jorge da Rocha Cardoso
PhD (Co-supervisor): Susana Manso Araújo

Bolseira de investigação em projeto (Main Supervisor): Andreia Cerqueira
Bolseiro de investigação em projeto (Main Supervisor): Micael Gonçalves

Post-doc (Main Supervisor): Liliana Tavares dos Santos

PhD (Main Supervisor): Cátia Fidalgo
PhD (Main Supervisor): Anabela Rodrigues Lopes
PhD (Main Supervisor): Sofia Laura Ferreira Leite
PhD (Main Supervisor): Forough Nazar Pour
PhD (Main Supervisor): Carla Bernardete Rodrigues Barradas
(ex-CESAM member)
PhD (Co-supervisor): Isabel Oliveira Fernandes
(ex-CESAM member)
PhD (Co-supervisor): Nelita Gonçalves Faria de Bessa
(not a CESAM member)

Master (Main Supervisor): Catarina da Silva Oliveira
(not a CESAM member)
Master (Main Supervisor): Vânia Catarina Mendes Martins
(not a CESAM member)
Master (Main Supervisor): Sofia Laura Ferreira Leite
(not a CESAM member)
Master (Main Supervisor): Ana Margarida Freire Aleixo
(not a CESAM member)
Master (Co-supervisor): Márcia Raquel Maia Saraiva
(not a CESAM member)
Master (Co-supervisor): Maria Teresa Calixto Ribeiro Claro
(not a CESAM member)
Master (Co-supervisor): Alexandra Montenegro Areal
(not a CESAM member)
Master (Co-supervisor): Isabel Cristina Matias Soares
(not a CESAM member)
Master (Co-supervisor): Diana Marina Gomes de Campos
(not a CESAM member)
Master (Co-supervisor): Carina Rafaela Faria da Costa Félix
(not a CESAM member)

Bolseira Investigação (Main Supervisor): Susana Manso Araújo



Projects
AgroForWealth: Biorefining of agricultural and forest products, by-products and wastes: integrated strategic valorisation of resources towards society wealth and sustainability [see details]

Symbiolite - Um novo processo de calcificação mediado por algas simbióticas de corais: estrutura, função, papel ecológico e significado evolutivo [see details]

ALIEN - An integrated approach to unravel Lasiodiplodia-grapevine Interactions [see details]

URGENTpine ­ UnRaveling host­pathoGEn iNteracTions in pine pitch canker disease [see details]

EXPLOCHAR: Exploring mechanisms of reducing drought and disease stress in eucalypt seedlings by applying biochar to soils [see details]

LUNA -Low-flying Unmanned Aereal forest monitoring system [see details]

MICRONEMA - Spatial and temporal analysis of microbial community in Pine Wilt Disease [see details]

PANDORA - Potential impact of climate changes on Botryosphaeriaceae-related diseases of Eucalyptus spp. in Portugal [see details]

Advanced Course on Protein Profiling of Microorganisms [see details]

PhytoMarsh - The phytosphere of salt-marsh plants: an underexplored microbial hot-spot [see details]

The microbiota of two bivalve species of economical relevance, Cerastoderma edule (common cockle) and Ruditapes philippinarum (manila clam): mode of association and transmission in sympatry situations [see details]

Inventory, dynamics and impact of the parasites trematodes and bacteria in bivalves of high economic importance in Portugal [see details]

Prometheus - PROteoME of Diplodia corticola, the cork oak paTHogEn fungUS [see details]

SEAGULL- Identification of nonpoint sources of faecal pollution in a natural environment: contributing data for risk assessment [see details]

Listeria monocytogenes in foods: contributing data for risk assessment [see details]

The plant pathogenic genus Phomopsis and its Diaporthe teleomorphs: development of morphological, biological and phylogenetic species concepts [see details]

Publications
  1. Barradas C., Pinto G., Correia B., Castro B.B., Phillips A.J.L., Alves A. (in press) Drought x Disease interaction in Eucalyptus globulus under Neofusicoccum eucalyptorum infection. Plant Pathology. (see details) ISI paper
    Link: http://dx.doi.org/10.1111/ppa.12703
  2. Tacão M, Araújo S, Vendas M, Alves A, Henriques I (in press) Shewanella species as the origin of blaOXA-48 genes: insights into gene diversity, associated phenotypes and possible transfer mechanisms. International Journal Of Antimicrobial Agents. (see details) ISI paper
  3. Félix C., Pinto G., Amaral J., Fernandes I., Alves A., Esteves A.C. (in press) Strain-related pathogenicity in Diplodia corticola. Forest Pathology. (see details) ISI paper
    Link: http://dx.doi.org/10.1111/efp.12366
  4. Gonzalez-Dominguez E., Alves A., Leon M., Armengol J. (2017) Characterization of Botryosphaeriaceae species associated with diseased loquat (Eriobotrya japonica) in Spain. Plant Pathology. 66, 1, 77-89. (see details) ISI paper
    Link: http://dx.doi.org/10.1111/ppa.12556
  5. Rodriguez-Galvez E., Guerrero P., Barradas C., Crous P.W., Alves A. (2017) Phylogeny and pathogenicity of Lasiodiplodia species associated with dieback of mango in Peru. Fungal Biology. 121, 4, 452-465. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.funbio.2016.06.004
  6. Lopes A., Phillips A.J.L., Alves A. (2017) Mating type genes in the genus Neofusicoccum: Mating strategies and usefulness in species delimitation. Fungal Biology. 121, 4, 394-404. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.funbio.2016.08.011
  7. da Silva M.F., Ferreira V., Magalhaes R., Almeida G., Alves A., Teixeira P. (2017) Detection of premature stop codons leading to truncated internalin A among food and clinical strains of Listeria monocytogenes. Food Microbiology. 63, 6-11. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.fm.2016.10.033
  8. de Lima F.B., Félix C., Osório N., Alves A., Vitorino R., Domingues P., Ribeiro R.T.D., Esteves A.C. (2017) Trichoderma harzianum T1A constitutively secretes proteins involved in the biological control of Guignardia citricarpa. Biological Control. 106, 99-109. (see details) ISI paper
    Link: https://authors.elsevier.com/a/1UPHK3kk-a7hP6
  9. Santos L., Alves A., Alves R. (2017) Evaluating multi-locus phylogenies for species boundaries determination in the genus Diaporthe. Peerj. 5, (see details) ISI paper
    Link: http://dx.doi.org/10.7717/peerj.3120
  10. Cerqueira A., Alves A., Berenguer H., Correia B., Gomez-Cadenas A., Diez J.J., Monteiro P., Pinto G. (2017) Phosphite shifts physiological and hormonal profile of Monterey pine and delays Fusarium circinatum progression. Plant Physiology And Biochemistry. 114, 88-99. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.plaphy.2017.02.020
  11. Fidalgo C., Rocha J., Proenca D.N., Morais P.V., Alves A., Henriques I. (2017) Saccharospirillum correiae sp nov., an endophytic bacterium isolated from the halophyte Halimione portulacoides. International Journal Of Systematic And Evolutionary Microbiology. 67, 6, 2026-2030. (see details) ISI paper
    Link: http://dx.doi.org/10.1099/ijsem.0.001914
  12. Santos L., Phillips A.J.L., Crous P.W., Alves A. (2017) Diaporthe species on Rosaceae with descriptions of D. pyracanthae sp. nov. and D. malorum sp. nov. Mycosphere. 8, 5, 485-511. (see details) ISI paper
    Link: http://dx.doi.org/10.5943/mycosphere/8/5/2
  13. Fidalgo C., Martins R., Proença D.N., Morais P.V., Alves A., Henriques I. (2017) Zunongwangia endophytica sp. nov., an endophyte isolated from the salt marsh plant Halimione portulacoides, and emended description of the genus Zunongwangia. International Journal Of Systematic And Evolutionary Microbiology . 67, 8, 3004-3009. (see details) ISI paper
    Link: http://dx.doi.org/10.1099/ijsem.0.002069
  14. Fidalgo C., Rocha J., Martins R., Proença D.N., Morais P.V., Henriques I., Alves A. (2017) Altererythrobacter halimionae sp. nov. and Altererythrobacter endophyticus sp. nov., two endophytes from the salt marsh plant Halimione portulacoides. International Journal Of Systematic And Evolutionary Microbiology . 67, 8, 3057-3062. (see details) ISI paper
    Link: http://dx.doi.org/10.1099/ijsem.0.002079
  15. Araújo S., Silva I.A.T., Tacão M., Patinha C., Alves A., Henriques I. (2017) Characterization of antibiotic resistant and pathogenic Escherichia coli in irrigation water and vegetables in household farms. International Journal Of Food Microbiology. 257, 192-200. (see details) ISI paper
    Link: https://doi.org/10.1016/j.ijfoodmicro.2017.06.020
  16. Leite L., Jude-Lemeilleur F., Raymond N., Henriques I., Garabétian F., Alves A. (2017) Phylogenetic diversity and functional characterization of the Manila clam microbiota: a culture-based approach. Environmental Science And Pollution Research. 24, 27, 21721-21732. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s11356-017-9838-z
  17. Alves C., Duarte M., Ferreira M., Alves A., Almeida A., Cunha A. (2016) Air quality in a school with dampness and mould problems. Air Quality Atmosphere And Health. 9, 2, 107-115. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s11869-015-0319-6
  18. Cinelli T., Mondello V., Marchi G., Burruano S., Alves A., Mugnai L. (2016) First Report of Diaporthe eres Associated with Cane Blight of Grapevine (Vitis vinifera) in Italy. Plant Disease. 100, 2, 532-532. (see details) ISI paper
    Link: http://dx.doi.org/10.1094/PDIS-08-15-0872-PDN
  19. Andolfi A., Basso S., Giambra S., Conigliaro G., Lo Piccolo S., Alves A., Burruano S. (2016) Lasiolactols A and B Produced by the Grapevine Fungal Pathogen Lasiodiplodia mediterranea. Chemistry & Biodiversity. 13, 4, 395-402. (see details) ISI paper
    Link: http://dx.doi.org/10.1002/cbdv.201500104
  20. Fidalgo C., Henriques I., Rocha J., Tacao M., Alves A. (2016) Culturable endophytic bacteria from the salt marsh plant Halimione portulacoides: phylogenetic diversity, functional characterization, and influence of metal(loid) contamination. Environmental Science And Pollution Research. 23, 10, 10200-10214. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s11356-016-6208-1
  21. Barradas C., Phillips A.J.L., Correia A., Diogo E., Braganca H., Alves A. (2016) Diversity and potential impact of Botryosphaeriaceae species associated with Eucalyptus globulus plantations in Portugal. European Journal Of Plant Pathology. 146, 2, 245-257. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s10658-016-0910-1
  22. Linaldeddu B.T., Deidda A., Scanu B., Franceschini A., Alves A., Abdollahzadeh J., Phillips A.J.L. (2016) Phylogeny, morphology and pathogenicity of Botryosphaeriaceae, Diatrypaceae and Gnomoniaceae associated with branch diseases of hazelnut in Sardinia (Italy). European Journal Of Plant Pathology. 146, 2, 259-279. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s10658-016-0912-z
  23. Rocha J., Tacao M., Fidalgo C., Alves A., Henriques I. (2016) Diversity of endophytic Pseudomonas in Halimione portulacoides from metal(loid)-polluted salt marshes. Environmental Science And Pollution Research. 23, 13, 13255-13267. (see details) ISI paper
    Link: doi:10.1007/s11356-016-6483-x.
  24. de Lima F.B., Felix C., Osorio N., Alves A., Vitorino R., Domingues P., Correia A., Ribeiro R.T.D., Esteves A.C. (2016) Secretome analysis of Trichoderma atroviride T17 biocontrol of Guignardia citricarpa. Biological Control. 99, 38-46. (see details) ISI paper
    Link: http://authors.elsevier.com/sd/article/S1049964416300597
  25. Henriques I., Tacao M., Leite L., Fidalgo C., Araujo S., Oliveira C., Alves A. (2016) Co-selection of antibiotic and metal(loid) resistance in gram-negative epiphytic bacteria from contaminated salt marshes. Marine Pollution Bulletin. 109, 1, 427-434. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.marpolbul.2016.05.031
  26. Braganca H., Neno J., Henriques J., Diogo E., Alves A. (2016) First Report of Diplodia quercivora Causing Dieback on Quercus suber and in Europe. Plant Disease. 100, 10, 2166-2166. (see details) ISI paper
    Link: http://dx.doi.org/10.1094/PDIS-03-16-0380-PDN
  27. Daranagama D.A., Thambugala K.M., Campino B., Alves A., Bulgakov T.S., Phillips A.J.L., Liu X.Z., Hyde K.D. (2016) Phaeobotryon negundinis sp nov (Botryosphaeriales) from Russia. Mycosphere. 7, 7, 933-941. (see details) ISI paper
    Link: http://dx.doi.org/10.5943/mycosphere/si/1b/2
  28. Teixeira P., Tacao M., Alves A., Henriques I. (2016) Antibiotic and metal resistance in a ST395 Pseudomonas aeruginosa environmental isolate: A genomics approach. Marine Pollution Bulletin. 110, 1, 75-81. (see details) ISI paper
  29. Felix C., Duarte A.S., Vitorino R., Guerreiro A.C.L., Domingues P., Correia A.C.M., Alves A., Esteves A.C. (2016) Temperature Modulates the Secretome of the Phytopathogenic Fungus Lasiodiplodia theobromae. Frontiers In Plant Science. 7, (see details) ISI paper
    Link: http://dx.doi.org/10.3389/fpls.2016.01096
  30. Linaldeddu B.T., Alves A., Phillips A.J.L. (2016) Sardiniella urbana gen. et sp nov., a new member of the Botryosphaeriaceae isolated from declining Celtis australis trees in Sardinian streetscapes. Mycosphere. 7, 7, 893-905. (see details) ISI paper
    Link: http://dx.doi.org/10.5943/mycosphere/si/1b/5
  31. Fidalgo C., Riesco R., Henriques I., Trujillo M.E., Alves A. (2016) Microbacterium diaminobutyricum sp nov., isolated from Halimione portulacoides, which contains diaminobutyric acid in its cell wall, and emended description of the genus Microbacterium. International Journal Of Systematic And Evolutionary Microbiology. 66, 4492-4500. (see details) ISI paper
    Link: http://dx.doi.org/10.1099/ijsem.0.001379
  32. Linaldeddu B.T., Maddau L., Franceschini A., Alves A., Phillips A.J.L. (2016) Botryosphaeriaceae species associated with lentisk dieback in Italy and description of Diplodia insularis sp nov. Mycosphere. 7, 7, 962-977. (see details) ISI paper
    Link: http://dx.doi.org/10.5943/mycosphere/si/1b/8
  33. Giambra S., Piazza G., Alves A., Mondello V., Berbegal M., Armengol J., Burruano S. (2016) Botryosphaeriaceae species associated with diseased loquat trees in Italy and description of Diplodia rosacearum sp nov. Mycosphere. 7, 7, 978-989. (see details) ISI paper
    Link: http://dx.doi.org/10.5943/mycosphere/si/1b/9
  34. Lopes A., Barradas C., Phillips A.J.L., Alves A. (2016) Diversity and phylogeny of Neofusicoccum species occurring in forest and urban environments in Portugal. Mycosphere. 7, 7, 906-920. (see details) ISI paper
    Link: http://dx.doi.org/10.5943/mycosphere/si/1b/10
  35. Rodriguez-Galvez E., Maldonado E., Alves A. (2015) Identification and pathogenicity of Lasiodiplodia theobromae causing dieback of table grapes in Peru. European Journal Of Plant Pathology. 141, 3, 477-489. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s10658-014-0557-8
  36. Frommlet J., Guimaraes B., Sousa L., Serodio J., Alves A. (2015) Neptunomonas phycophila sp nov isolated from a culture of Symbiodinium sp., a dinoflagellate symbiont of the sea anemone Aiptasia tagetes. International Journal Of Systematic And Evolutionary Microbiology. 65, 3, 915-919. (see details) ISI paper
    Link: http://dx.doi.org/10.1099/ijs.0.000039
  37. Alves A., Riesco R., Correia A., Trujillo M.E. (2015) Microbacterium proteolyticum sp nov isolated from roots of Halimione portulacoides. International Journal Of Systematic And Evolutionary Microbiology. 65, 1794-1798. (see details) ISI paper
    Link: http://dx.doi.org/10.1099/ijs.0.000177
  38. Frommlet J.C., Sousa M.L., Alves A., Vieira S.I., Suggett D.J., Serodio J. (2015) Coral symbiotic algae calcify ex hospite in partnership with bacteria. Proceedings Of The National Academy Of Sciences Of The United States Of America. 112, 19, 6158-6163. (see details) ISI paper
    Link: http://www.pnas.org/content/early/2015/04/22/1420991112.abstract
  39. Frommlet J.C., Sousa L., Alves A., Vieira S.I., Suggett D.J., Serodio J. (2015) SYMBIODINIUM - THE FIRST DINOFLAGELLATE KNOWN TO DRIVE MICROBIAL-ALGAL CALCIFICATION. European Journal Of Phycology. 50, 56-57. (see details) ISI paper
  40. Araújo S., Henriques I.S., Leandro S.M., Alves A., Pereira A., Correia A. (2014) Gulls identified as major source of fecal pollution in coastal waters: a microbial source tracking study. Science Of The Total Environment. 470-471, 84-91. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.scitotenv.2013.09.075
  41. Seabra M.P., Grave L., Oliveira C., Alves A., Correia A., Labrincha J.A. (2014) Porcelain stoneware tiles with antimicrobial action. Ceramics International. 40, 4, 6063-6070. 1873-3956. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.ceramint.2013.11.056
  42. Nilsson R.H., Hyde K.D., Pawlowska J., Ryberg M., Tedersoo L., Aas A.B., Alias S.A., Alves A., Anderson C.L., Antonelli A., Arnold A.E., Bahnmann B., Bahram M., Bengtsson-Palme J., Berlin A., Branco S., Chomnunti P., Dissanayake A., Drenkhan R., Friberg H., Froslev T.G., Halwachs B., Hartmann M., Henricot B., Jayawardena R., Jumpponen A., Kauserud H., Koskela S., Kulik T., Liimatainen K., Lindahl B.D., Lindner D., Liu J.K., Maharachchikumbura S., Manamgoda D., Martinsson S., Neves M.A., Niskanen T., Nylinder S., Pereira O.L., Pinho D.B., Porter T.M., Queloz V., Riit T., Sanchez-Garcia M., de Sousa F., Stefanczyk E., Tadych M., Takamatsu S., Tian Q., Udayanga D., Unterseher M., Wang Z., Wikee S., Yan J.Y., Larsson E., Larsson K.H., Koljalg U., Abarenkov K. (2014) Improving ITS sequence data for identification of plant pathogenic fungi. Fungal Diversity. 67, 1, 11-19. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s13225-014-0291-8
  43. Alves A., Linaldeddu B.T., Deidda A., Scanu B., Phillips A.J.L. (2014) The complex of Diplodia species associated with Fraxinus and some other woody hosts in Italy and Portugal. Fungal Diversity. 67, 1, 143-156. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s13225-014-0282-9
  44. Fernandes I., Alves A., Correia A., Devreese B., Esteves A.C. (2014) Secretome analysis identifies potential virulence factors of Diplodia corticola, a fungal pathogen involved in cork oak (Quercus suber) decline. Fungal Biology. 118, 5-6, 516-523. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.funbio.2014.04.006
  45. Esteves A.C., Saraiva M., Correia A., Alves A. (2014) Botryosphaeriales fungi produce extracellular enzymes with biotechnological potential. Canadian Journal Of Microbiology. 60, 5, 332-342. (see details) ISI paper
    Link: http://dx.doi.org/10.1139/cjm-2014-0134
  46. Sousa A.C.A., Almeida J.R.S.L., Pereira C.C., Pastorinho M.R., Pereira A.M.C., Nogueira A.J.A., Taborda-Barata L., Teixeira J.P., Correia A.C.M., Alves A. (2014) Characterization of fungal diversity in house dust samples collected from central Portugal - a preliminary survey. Journal Of Toxicology And Environmental Health – Part A Current Issues . 77, 14-16, 972-982. (see details) ISI paper
    Link: http://dx.doi.org/10.1080/15287394.2014.911137
  47. Campos D., Alves A., Lemos M.F.L., Correia A., Soares A.M.V.M., Pestana J.L.T. (2014) Effects of cadmium and resource quality on freshwater detritus processing chains: a microcosm approach with two insect species. Ecotoxicology. 23, 5, 830-839. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s10646-014-1223-9
  48. Alves A., Correia A., Igual J.M., Trujillo M.E. (2014) Microbacterium endophyticum sp nov and Microbacterium halimionae sp nov., endophytes isolated from the salt-marsh plant Halimione portulacoides and emended description of the genus Microbacterium. Systematic And Applied Microbiology. 37, 7, 474-479. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.syapm.2014.08.004
  49. Alves A., Barradas C., Phillips A.J.L., Correia A. (2013) Diversity of Botryosphaeriaceae species associated with conifers in Portugal. European Journal Of Plant Pathology. 135, 791-804. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s10658-012-0122-2
  50. Barradas C., Correia A., Alves A. (2013) First report of Neofusicoccum australe and N. luteum associated with canker and dieback of Quercus robur in Portugal. Plant Disease. 97, 4, 560 (see details) ISI paper
  51. Linaldeddu B.T., Franceschini A., Alves A., Phillips A.J.L. (2013) Diplodia quercivora sp. nov.: a new species of Diplodia on declining Quercus canariensis trees in Tunisia. Mycologia. 105, 5, 1266-1274. (see details) ISI paper
    Link: http://dx.doi.org/10.3852/12-370
  52. Pereira A., Santos A., Tacão M., Alves A., Henriques I., Correia A. (2013) Genetic diversity and antimicrobial resistance of Escherichia coli from Tagus estuary (Portugal). Science Of The Total Environment. 461, 65-71. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.scitotenv.2013.04.067
  53. Phillips A.J.L., Alves A., Abdollahzadeh J., Slippers B., Wingfield M.J., Groenewald J.Z., Crous P.W. (2013) The Botryosphaeriaceae: genera and species known from culture. Studies In Mycology. 76, 51–167 (see details) ISI paper
    Link: http://dx.doi.org/10.3114/sim0021
  54. Loureiro C., Castro B.B., Claro M.T., Alves A., Pedrosa M.A., Gonçalves F. (2012) Genetic variability in the tolerance of natural populations of Simocephalus vetulus (Müller, 1776) to lethal levels of sodium chloride. Annales De Limnologie - International Journal Of Limnology. 48, 95-103. (see details) ISI paper
    Link: http://dx.doi.org/10.1051/limn/2012002
  55. Oliveira H., Sousa A., Alves A., Nogueira A.J.A., Santos C. (2012) Inoculation with Ophiostoma novo-ulmi subsp. americana affects photosynthesis, nutrition and oxidative stress in in vitro Ulmus minor plants. Environmental And Experimental Botany. 77, 146-155. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.envexpbot.2011.11.008
  56. Phillips A.J.L., Lopes J., Abdollahzadeh J., Bobev S., Alves A. (2012) Resolving the complex of Diplodia species on apple and other Rosaceae hosts. Persoonia. 29, 29-38. (see details) ISI paper
  57. Galhano V., de Figueiredo D.R., Alves A., Correia A., Pereira M.J., Gomes-Laranjo J., Peixoto F. (2011) Morphological, biochemical and molecular characterization of Anabaena, Aphanizomenon and Nostoc strains (Cyanobacteria, Nostocales) isolated from Portuguese freshwater habitats. Hydrobiologia. 663, 1, 187-203. (see details) ISI paper
  58. Duarte S., Pascoal C., Alves A., Correia A., Cássio F. (2010) Assessing the dynamic of microbial communities during leaf decomposition in a low-order stream by microscopic and molecular techniques. Microbiological Research. 165, 5, 351-362. (see details) ISI paper
  59. de Figueiredo D.R., Alves A., Pereira M.J., Correia A. (2010) Molecular characterization of bloom-forming Aphanizomenon strains isolated from Vela Lake (Centralwestern Portugal). Journal Of Plankton Research . 32, 2, 239-252. (see details) ISI paper
  60. Sergeeva V., Alves A., Phillips A.J.L. (2009) Neofusicoccum luteum associated with leaf necrosis and fruit rot of olives in New South Wales, Australia. Phytopathologia Mediterranea . 48, 2, 294-298. (see details) ISI paper
  61. Phillips A.J.L., Alves A. (2009) Taxonomy, phylogeny, and epitypification of Melanops tulasnei, the type species of Melanops. Fungal Diversity. 38, 155-166. (see details) ISI paper
  62. Duarte S., Pascoal C., Alves A., Correia A., Cássio F. (2008) Copper and zinc mixtures induce shifts in microbial communities and reduce leaf litter decomposition in streams. Freshwater Biology. 53, 91-101. (see details) ISI paper
  63. Alves A., Crous P.W., Correia A., Phillips A.J.L. (2008) Morphological and molecular data reveal cryptic speciation in Lasiodiplodia theobromae. Fungal Diversity. 28, 1-13. (see details) ISI paper
  64. Lazzizera C., Frisullo S., Alves A., Phillips A.J.L. (2008) Morphology, phylogeny and pathogenicity of Botryosphaeria and Neofusicoccum species associated with drupe rot of olives in Southern Italy. Plant Pathology. 57, 5, 948–956 (see details) ISI paper
  65. Phillips A.J.L, Alves A., Pennycook S., Johnston P., Ramaley A., Akulov A., Crous P.W. (2008) Resolving the phylogenetic and taxonomic status of dark-spored teleomorph genera in the Botryosphaeriaceae. Persoonia. 21, 29-55. (see details) ISI paper
  66. Henriques I., Fonseca F., Alves A., Saavedra M. J., Correia A. (2008) Tetracycline-resistance genes in Gram-negative isolates from estuarine waters. Letters In Applied Microbiology. 47, 526-533. (see details) ISI paper
  67. Lazzizera C., Frisullo S., Alves A., Lopes J., Phillips A.J.L. (2008) Phylogeny and morphology of Diplodia species on olives in southern Italy and. Fungal Diversity. 31, 63-71. (see details) ISI paper
  68. Alves A., Phillips A.J.L., Henriques I., Correia A. (2007) Rapid differentiation of species of Botryosphaeriaceae by PCR fingerprinting. Res Microbiol. 158, 112-121. (see details) ISI paper
  69. Phillips A.J.L., Crous P.W., Alves A. (2007) Diplodia seriata, the anamorph of “Botryosphaeria” obtusa. Fungal Diversity. 25, 141-155. (see details) ISI paper
  70. Alves A., Phillips A.J.L., Correia A. (2006) Multi-gene genealogies and morphological data support Diplodia cupressi sp. nov., previously recognized as D. pinea f. sp. cupressi, as a distinct species. Fungal Diversity. 23, 1-15. (see details) ISI paper
  71. Crous P.W., Slippers B., Wingfield M.J., Reeder J., Marasas W.F.O., Phillips A.J.L., Alves A., Burgess T., Barber P., Groenewald J.Z. (2006) Phylogenetic lineages in the Botryosphaeriaceae. Studies In Mycology. 55, 235-253. (see details) ISI paper
  72. Phillips A.J.L., Oudemans P., Correia A., Alves A. (2006) Characterisation and epitypification of Botryosphaeria corticis, the cause of blueberry cane canker. Fungal Diversity. 21, 141-155. (see details) ISI paper
  73. Henriques I., Alves A., Tacão M., Almeida A., Cunha A., Correia A. (2006) Genetic diversity and dynamics of free-living bacterial community along an estuarine gradient (Ria de Aveiro, Portugal). Estuarine Coastal And Shelf Science . 68, 139-148. (see details) ISI paper
  74. Henriques I., Moura A., Alves A., Saavedra M.J., Correia A. (2006) Analysing diversity among beta-lactamase encoding genes in aquatic environments. Fems Microbiology Ecology. 56, 418-429. (see details) ISI paper
  75. Henriques I., Fonseca F., Alves A., Saavedra M.J., Correia A. (2006) Ocurrence and diversity of integrons and beta-lactamase genes among ampicillin-resistant isolates from estuarine waters. Research In Microbiology. 157, 938-947. (see details) ISI paper
  76. Phillips A.J.L., Alves A., Correia A., Luque J. (2005) Two new species of Botryosphaeria with brown, 1-septate ascospores and Dothiorella anamorphs. Mycologia. 2, 97, 513-529. (see details) ISI paper
  77. Phillips A.J.L., Rumbos I.C., Alves A., Correia A. (2005) Morphology and phylogeny of Botryosphaeria dothidea causing fruit rot of olives. Mycopathologia. 3, 159, 433-439. (see details) ISI paper
  78. Alves A., Phillips A.J.L., Henriques I., Correia A. (2005) Evaluation of Amplified Ribosomal DNA Restriction Analysis (ARDRA) as a method for the identification of Botryosphaeria species. Fems Microbiology Letters. 2, 245, 221-229. (see details) ISI paper
  79. Tacão M., Moura A., Alves A., Henriques I., Saavedra M.J., Correia A. (2005) Evaluation of 16S-rDNA- and gyrB-DGGE for typing members of the genus Aeromonas. Fems Microbiology Letters. 1, 246, 11-18. (see details) ISI paper
  80. Tacão M., Alves A., Saavedra M.J., Correia A. (2005) BOX-PCR is an adequate tool for typing Aeromonas spp. . Antonie Van Leeuwenhoek . 2, 88, 173-179. (see details) ISI paper
  81. Alves A., Henriques I., Fragoeiro S., Santos C., Phillips A.J.L., Correia A. (2004) Applicability of rep-PCR genomic fingerprinting to molecular discrimination of members of the genera Phaeoacremonium and Phaeomoniella. Plant Pathology. 5, 53, 629-634. (see details) ISI paper
  82. Alves A., Correia A., Luque J., Phillips A.J.L. (2004) Botryosphaeria corticola sp. nov. on Quercus species, with notes and description of Botryosphaeria stevensii and its anamorph Diplodia mutila. Mycologia. 3, 96, 598-613. (see details) ISI paper
  83. Henriques I., Moura A., Alves A., Saavedra M. J., Correia A. (2004) Molecular characterization of a novel class a beta-lactamase, SFC-1, from Serratia fonticola UTAD54. Antimicrobial Agents And Chemotherapy . 48, 2321-2324. (see details) ISI paper
  84. Saavedra M.J., Peixe L., Sousa J.C., Henriques I., Alves A., Correia A. (2003) Sfh-I, a subclass B2 metallo-beta-lactamase from a Serratia fonticola environmental isolate. Antimicrobial Agents And Chemotherapy . 7, 47, 2330-2333. (see details) ISI paper
  85. Alves A., Santos O., Henriques I., Correia A. (2002) Evaluation of methods for molecular typing and identification of members of the genus Brevibacterium and other related species. Fems Microbiology Letters. 2, 213, 205-211. (see details) ISI paper
  1. Bessa N.G.F. de, Pereira M.A.B. , Ferraz V., Poletto K.Q., Chagas Júnior A.F., Alves A. (2015) Antimicrobial activity and medicinal biomass of Siparuna guianensis in Brazilian Cerrado forest, a global hotspot. Journal Of Medicinal Plants Research . 9, 37, 968-980. (see details)
    Link: http://dx.doi.org/10.5897/JMPR2015.5884
  2. Henriques I., Ramos R.T.J., Baraúna R.A., de Sá P.H., Almeida D.M., Carneiro A.R., Barbosa S., Pereira A., Alves A., Saavedra M.J., Egas C., Silva A., Correia A. (2013) Draft genome sequence of Serratia fonticola UTAD54, a carbapenem- resistant strain isolated from drinking water. Genome Announcements. e00970-13. (see details)
  3. Carneiro A.R., Ramos R.T.J., Baraúna R.A., de Sá P.H., Almeida D.M., Barbosa S., Pereira A., Alves A., Egas C., Correia A., Henriques I., Silva A. (2013) Draft Genome sequence of Serratia fonticola LMG 7882T isolated from freshwater. Genome Announcements. 1, e00971-13. (see details)
  4. Bessa N.G.F. de, Borges ,J.C.M., Beserra F.P., Carvalho R.H.A., Pereira M.A.B., Fagundes R., Campos S.L., Ribeiro L.U., Quirino M.S., Chagas Junior A.F., Alves A. (2013) Prospecção fitoquímica preliminar de plantas nativas do cerrado de uso popular medicinal pela comunidade rural do assentamento vale verde – Tocantins. Revista Brasileira De Plantas Medicinais. 15, 4, 692-707. (see details)
  5. Claro M.T., Castro B. B., Alves A., Correia A., Loureiro C., Gonçalves F. (2010) “Impressões digitais moleculares” – um caso de estudo com populações naturais de zooplâncton. Captar. 2, 3, 6-20. (see details)
    Link: http://captar.web.ua.pt/index.aspx?op=verResumo&ID=351
  1. Esteves, A.C., Fernandes, I., Devreese, B., Alves, A., Correia, A. (2016) José Francisco Rangel, Carlos Manuel Faísca, Sónia Bombico y. (EDS.), El alcornocal y el negocio corchero: Una perspectiva histórica e interdisciplinar. Badajoz. Diputación de Badajoz. 978-84-608-7632-8. (see details)
  2. Henriques I., Alves A., Saavedra M. J., Montforts M., Correia A. (2012) The environmental antibiotic resistome: new insights from culture-independent approaches. In: Antibiotic Microbial Resistance in the Environment. New Jersey. Wiley-Blackwell. 978-0-470-90542-5. (see details)
    Link: http://books.google.com/books?id=wD39Dwt1yycC&pg=PR8&lpg=PR8&dq=The+envi...
  3. Alves A., Phillips A.J.L., Correia A. (2011) Chapter 13 Macrophomina. In: Molecular detection of human fungal pathogens. Boca Raton. CRC Press Taylor & Francis Group. 978-1-4398-1240-2. (see details)
  4. Alves A., Phillips A. J.L., Correia A. (2011) Chapter 15 Neodeightonia. In: Molecular detection of human fungal pathogens. Boca Raton . CRC Press Taylor & Francis Group. 978-1-4398-1240-2. (see details)
  1. Barradas C. (2016) Climate change and Botryosphaeriaceae diseases of Eucalyptus in Portugal. PhD Thesis. [supervisor] (see details)
  2. Berenguer H. (2016) Predisposição de Eucalyptus a Neofusicoccum kwambonambiense causada por stress hídrico. MSc Thesis. [supervisor] (see details)
  3. Campino B. (2016) Diversidade de espécies de Botryosphaeriaceae associadas a plantas na região de Rostov (Rússia). MSc Thesis. [supervisor] (see details)
  4. Cerqueira A. (2016) Efeito do fosfito de potássio na interação Fusarium circinatum – Pinus radiata. MSc Thesis. [co-supervisor] (see details)
  5. Fernandes I. (2015) Infection mechanism of Diplodia corticola. PhD Thesis. [co-supervisor] (see details)
  6. Pinheiro A.R. (2015) Extracellular enzymes of Botryosphaeriaceae family. MSc Thesis. [co-supervisor] (see details)
  7. Bessa N. (2014) Floresta de Savana Brasileira: reservatório medicinal e bioprospecção. PhD Thesis. [co-supervisor] (see details)
  8. Gaspar J. (2014) Características fenotípicas e genotípicas de doentes com Espondilite Anquilosante. MSc Thesis. [co-supervisor] (see details)
  9. Guimarães B. (2014) Evaluation of a new molecular typing strategy of Pseudomonas aeruginosa. MSc Thesis. [co-supervisor] (see details)
  10. Nobre I. (2014) Ação Reguladora das Células Mesenquimais do estroma nas Células NK em Artrite Reumatóide. MSc Thesis. [co-supervisor] (see details)
  11. Silva F. (2014) Prevalência de pneumonias no Centro Hospitalar de Leiria, E.P.E. MSc Thesis. [co-supervisor] (see details)
  12. Martins V. (2014) Comunidade bacteriana endofítica cultivável de Halimione portulacoides. MSc Thesis. [supervisor] (see details)
  13. Areal A. (2014) Impacto do rastreio de Streptococcus agalactiae na infecção neonatal. MSc Thesis. [co-supervisor] (see details)
  14. Aleixo A. (2013) Biodiversity of fungal endophytes of Halimione portulacoides. MSc Thesis. (see details)
  15. Félix C. (2012) Proteomic analysis of Lasiodiplodia theobromae: an opportunistic human fungal pathogen. MSc Thesis. [co-supervisor] (see details)
  16. Campos, D.M.G. (2012) Effects of cadmium on a model stream detritus processing chain. MSc Thesis. (see details)
    Link: http://ria.ua.pt/handle/10773/10276
  17. Leite S (2011) Caracterização de Enterococcus isolados de berbigão na Ria de Aveiro. MSc Thesis. [supervisor] (see details)
    Link: http://ria.ua.pt/bitstream/10773/7552/1/246438.pdf
  18. Claro M.T. (2009) Ferramentas de genotipagem para estudos populacionais em dafnídeos. MSc Thesis. (see details)
    Link: http://ria.ua.pt/handle/10773/830
  19. Soares I.C. (2009) Aeromicologia hospitalar. MSc Thesis. (see details)
    Link: http://ria.ua.pt/handle/10773/8775
  20. Saraiva M.R.M. (2009) Pesquisa de enzimas extracelulares em Botryosphaeria spp. MSc Thesis. (see details)
    Link: http://biblioteca.sinbad.ua.pt/Teses/2009001371
  21. Oliveira C. (2008) Clonagem e caracterização de genes de sintetase da quitina em Botryosphaeria spp. MSc Thesis. [supervisor] (see details)
  22. Alves A. (2006) Espécies de Botryosphaeria em Quercus spp. e outros hospedeiros lenhosos: taxonomia e filogenia / Botryosphaeria species on Quercus spp. and other woody hosts: taxonomy and phylogeny. PhD Thesis. (see details)
    Link: http://hdl.handle.net/10773/4731
  23. Alves A. (2001) Caracterização fenotípica e genotípica de estirpes de fungos fitopatogénicos do género Phaeoacremonium / Phenotypic and genotypic characterisation of strains of phytopathogenic fungi of the genus Phaeoacremonium. MSc Thesis. (see details)
    Link: https://ria.ua.pt/handle/10773/4358
  1. Giambra S., Piazza G., Alves A., Mondello V., Berbegal M., Armengol J., Burruano S. (2016) Loquat decline in Italy caused by botryosphaeriaceous fungi. (see details)
  2. Linaldeddu B.T., Alves A., Phillips A.J.L. (2016) Sardiniella urbana gen. et sp. nov. a new pathogen of Celtis australis. (see details)
  3. Cerqueira A, Alves A, Berenguer H, Correia B, Monteiro P, Diez J, Amaral J, Pinto G (2016) Phosphite delays the progression of Fusarium circinatum on Pinus radiata: a physiological approach. (see details)
  4. Frank Verheijen, Flavio Silva, Antonio Amaro, Gloria Pinto, Raquel Mesquita, Claudia Jesus, Artur Alves, and Jacob Keizer (2015) Trade-offs between soil hydrology and plant disease effects after biochar amendment in sandy soil. (see details)
  5. Fidalgo C, Tacão M, Rocha J, Henriques I, Alves A (2015) Culturable endophytic bacteria from salt marsh plant Halimione portulacoides: functional characterization, phylogenetic diversity and influence of metal contamination. (see details)
  6. Leite L., Jude-Lemeilleur F., Raymond N., Garabetian F., Alves A. (2015) Potential effect of metal contamination on the microbiome of Manila clam (Venerupis phillipinarum): a culture-based approach. (see details)
  7. I Fernandes, A Alves, B Devreese, A Correia, AC Esteves (2015) Why are cork oak trees dying? . (see details)
  8. F.B. Lima, C. Félix, N. Osório, A. Alves, R. Vitorino, P. Domingues, R.T. Silva Ribeiro, A. Correia, A.C. Esteves (2015) Trichoderma as a biological control agent of Guignardia citricarpa: using proteomics to unravel molecular interactions. (see details)
  9. A.R. Pinheiro, A. Correia, A. Alves, A.C. Esteves (2015) Extracellular enzymes of Botryosphaeriaceae family. (see details)
  10. F. Nazar Pour, A. Alves, R. Vitorino, P. Domingues, A. Correia, A.C. Esteves (2015) Secretome analysis of the fungal plant pathogen Botryosphaeria dothidea. (see details)
  11. C Felix, A Andolfi, S Basso, MM Salvatore, A Correia, A Alves, AC Esteves (2015) Secondary metabolites by Lasiodiplodia theobromae strains and influence of growth conditions on their production. (see details)
  12. F Nazar Pour, A Alves, B Devreese, A Correia, AC Esteves (2015) Understanding pathogenicity of Botryosphaeriaceae on Eucalyptus using a comparative secretome analysis. (see details)
  13. Leite L., Jude-Lemeilleur F., Raymond N., Garabetian F., Alves A. (2015) Exploring the hologenome concept in Venerupis philippinarum (Manila clam) . (see details)
  14. Barradas, C., Pinto, G., Berenguer, H., Correia, B., Alves, A. (2015) Pathogenicity of Botryosphaeriaceae species to Eucalyptus spp. in Portugal. (see details)
  15. Anabela Lopes, Carla Barradas, António Correia, Alan J.L. Phillips, Artur Alves. (2015) Diversity and phylogeny of Neofusicoccum species from woody hosts in Portugal. (see details)
  16. Correia B, Jesus C, Amaral J, Berenguer H, Monteiro P, Alves A, Pinto G. (2015) Linking ‘omics and ecophysiology in eucalyptus: unravelling stress tolerance in a forest species. (see details)
  17. Rodríguez-Gálvez E., Saucedo-Bazalar M., Alves A. (2014) Pathogenic unspecificity of Lasiodiplodia theobromae. (see details)
  18. Rodríguez-Gálvez E., Alves A. (2014) Lasiodiplodia theobromae affecting the rachis of grapevine (Vitis vinifera L.). (see details)
  19. Tacao M., Araújo S., Correia A., Alves A., Henriques I. (2014) Environmental enterobacteria carrying blaOXA-48-like genes. (see details)
  20. Alves A., Correia A., Igual J.M., Riesco R., Trujillo M.E. (2014) Novel endophytic Microbacterium species from the salt-marsh plant Halimione portulacoides. . (see details)
  21. Nilsson R.H., Hyde K.D., Pawlowska J., Ryberg M., Tedersoo L., Aas A.B., Alias S.A., Alves A., Anderson C.L., Antonelli A., Arnold A.E., Bahnmann B., Bahram M., Bengtsson-Palme J., Berlin A., Branco S., Chomnunti P., Dissanayake A., Drenkhan R.,Friberg H., Frøslev T.G., Halwachs B., Hartmann M., Henricot B., Jayawardena R., Jumpponen A., Kauserud H., Koskela S., Kulik T., Liimatainen K., Lindahl B., Lindner D., Liu J-K., Maharachchikumbura S., Manamgoda D., Martinsson S., Neves M.A., Niskanen T., Nylinder S., Pereira O.L., Pinho D.B., Porter T.M., Queloz V., Riit T., Sanchez-García M., de Sousa F., Stefaczyk E., Tadych M., Takamatsu S., Tian Q., Udayanga D., Unterseher M., Wang Z., Wikee S., Yan J., Larsson E., Larsson K-H., Kõljalg U., Abarenkov K. (2014) Improving ITS sequence data for identification of plant-pathogenic fungi. (see details)
  22. Guerrero P., Alves A., Rodríguez-Gálvez E. (2014) Lasiodiplodia Spezies als Erreger des Triebsterbens an Mangopflanzen. (see details)
  23. Almeida J, Pereira AMC, Sousa ACA*, Pereira CC, Teixeira JP, Nogueira AJA, Correia ACM, Alves A (2014) Characterization of fungal diversity in house dust samples collected from two Portuguese cities - a preliminary survey. 116 (see details)
  24. Fidalgo C., Araújo S., Henriques I., Correia A., Alves A. (2013) Endophytic bacterial diversity in the salt marsh plant Halimione portulacoides. (see details)
  25. Araújo S., Henriques I., Leandro S.M., Alves A., Pereira A., Correia A. (2013) Seagulls identified as major source of fecal pollution in the Berlenga Island beach, Portugal. (see details)
  26. Tacão M., Leite S., Correia A., Alves A., Henriques I. (2013) Antibiotics and heavy metals co-resistance among phyllosphere bacteria in saltmarshes. (see details)
  27. Fernandes I., Alves A., Devreese B., Correia A., Esteves A.C. (2013) Secretome of a cork oak pathogen, Diplodia corticola. (see details)
  28. Barradas C., Moreirinha C., Delgadillo I., Correia A., Alves A. (2013) Potential of mid-infrared spectroscopy for the identification of plant pathogenic fungi. (see details)
  29. Santos L., Barradas C., Correia A., Phillips A.J.L., Alves A. (2013) Diversity and phylogeny of Diaporthe species from different plant hosts. (see details)
  30. Barradas C., Correia A., Phillips A.J.L., Alves A. (2013) Diversity of Botryosphaeriaceae species from Eucalyptus spp. in Portugal. (see details)
  31. Aleixo A., Barradas C., Félix C., Alves A. (2013) Endophytic mycobiota of the salt-marsh plant Halimione portulacoides: diversity and biotechnological potential. (see details)
  32. Fidalgo C., Henriques I., Alves A. (2013) Culturable endophytic bacteria from Halimione portulacoides: diversity and influence of Hg contamination. (see details)
  33. Bessa N.G.F., Borges J.C.M., Beserra F.P., Chagas Junior A.F., Alves A. (2013) Bioactive potential of medicinal plants from Cerrado, Brasil. (see details)
  34. Esteves A.C., Fernandes I., Alves A., Correia A. (2013) Estudo do mecanismo de infeção de Diplodia corticola em Quercus suber. (see details)
  35. Tacão M., Correia A., Alves A., Henriques I. (2013) Enterobacteria carrying OXA-48-like genes isolated from non-human sources. (see details)
  36. Félix C., Duarte A.C., Alves A., Vitorino R., Correia A., Esteves A.C. (2013) The effect of temperature on the secretome of Lasiodiplodia theobromae. (see details)
  37. Almeida R., Félix C., Duarte A.S., Alves A., Vitorino R., Correia A., Esteves A.C. (2013) Extracellular proteome of Diplodia corticola strains. (see details)
  38. Fernandes I., Alves A., Devreese B., Correia A., Esteves A.C. (2013) Comparison of Diplodia corticola secretome in an infection-induced environment. (see details)
  39. Fernandes I., Alves A., Devreese B., Correia A., Esteves A.C. (2013) When fungal proteomics meets cork oak decline. (see details)
  40. Rodrigues L., Alves A., Davies G.R., Foing B.H., Stoker C., Clarke J., Correia A. (2013) Molecular characterization of rock microbial communities from the Mars analogue MDRS. (see details)
  41. Guerrero P., Alves A., Rodríguez-Gálvez, E. (2013) Incidence, severity and prevalence of mango dieback in Piura-Peru. (see details)
  42. Rodríguez-Gálvez A., Maldonado A., Alves A. (2013) Lasiodiplodia theobromae causal agent of grape dieback in Piura, Perù. (see details)
  43. Campos, D., Lemos, M.F.L., Alves, A., Correia, A., Soares, A.M.V.M., Pestana, J.L.T. (2012) Effects of Cadmium and changes in resource quality (leaf species) on freshwater detritus based food webs. (see details)
  44. Monteiro H.R., da Fonseca K.L., Lima I.S.M., Campos D.M.G., Cruz A., Alves A., Correia A., Soares A.M.V.M., Pestana J.L.T., Esteves A.C., Lemos M.F.L. (2012) Bacterial diversity on Portuguese ports: TBT degrading bacteria. (see details)
  45. Rodrigues L., Valente T., Correia A., Alves A., Foing B., Davies G.R. (2012) Contribution of eukaryotic microbial communities to the formation of Fe-rich accretions in an extreme acidic environment. (see details)
  46. Fernandes I., Alves A., Devreese B., Correia A., Esteves A.C. (2012) The threat of Diplodia corticola to cork oak – how does infection occur?. (see details)
  47. Rodrigues L., Davies G.R., Foing B., Correia A., Alves A. (2012) Preventing microbial contamination at drilling activities – Strategies. (see details)
  48. Alves A. (2012) Economic and environmental aspects of phytopathogens of woody hosts. (see details)
  49. Alves A. (2012) Biodiversidade de fungos associados a plantas. (see details)
  50. Rodrigues L., Foing B.H., Davies G.R., Stoker C., Clarke J., Correia A., Alves A. (2012) Lithic microbial communities from a Mars analogue site in Utah desert. (see details)
  51. Pestana J.L.T., Campos D., Lemos M.F.L., Pedrosa J., Alves A., Correia A., Barata C., Soares A.M.V.M (2011) Indirect effects of Carbendazim in freshwaters. A laboratory study using a simple detritus based food web. (see details)
  52. Rodrigues L., Davies G.R., Foing B., Correia A., Alves A., Valdivia-Silva J., Zavaleta J., Stoker C., Willson D., Clarke J. (2011) Microbiological contamination assessment from drilling activities – recognition and design of prevention strategy. (see details)
  53. Esteves A.C., Santos J., Alves A., Correia A.C.M. (2011) Assessing D. corticola infection mechanism. (see details)
  54. Felix C., Duarte A.S., Alves, A., Esteves A.C., Correia A.C.M. (2011) Why phytopathogenic fungi infect humans? The case of Lasiodiplodia theobromae. (see details)
  55. Leite S., Correia A., Alves A. (2011) Enterococci in common cockles from Ria de Aveiro: diversity and antibiotic resistance. (see details)
  56. de Figueiredo D.R., Alves A., Gonçalves A.M.M., Castro B.B., Gonçalves F., Pereira M.J., Correia A. (2011) Inter- and intra-specific molecular and ecological variations among Aphanizomenon (Nostocales, Cyanobacteria) strains isolated from a eutrophic shallow lake. (see details)
  57. Claro M.T., Castro B.B., Alves A., Gonçalves F. (2010) Optimisation and use of a fingerprinting tool for genetic differentiation at the intraspecific levels in Simocephalus vetulus natural populations. (see details)
  58. Pestana J.LT., Tacão M., Lemos M.F.L., Campos B., Henriques I., Alves A., Correia A., Barata C., Soares A.M.V.M. (2010) Are Changes in microbial communities’ structure suitable indicators of Ecosystem Functioning in Lotic waters?. (see details)
  59. Santos, J., Campos, J.C., Alves, A., Correia, A., Esteves, A.C. (2010) Production of extracellular proteases by D. corticola is induced by its natural host. (see details)
  60. Saraiva M., Alves A., Correia A., Sarmento A.C. (2009) Cryopreservation of phytopathogenic fungi without cryoprotector agents. (see details)
  61. Saraiva M., Alves A., Correia A., Sarmento A.C. (2009) Production of extracellular proteases and cellulases by phytopathogenic fungi of the family Botryosphaeriaceae. (see details)
  62. Carvalho M.J., Henriques I., Alves A., Saavedra M.J., Correia A. (2009) Antimicrobial resistance and putative virulence of Aeromonas spp. from water and agricultural sources in Portugal. (see details)
  63. Alves A., Phillips A.J.L., Correia A. (2009) Biodiversity and systematics of plant pathogenic fungi. (see details)
  64. de Figueiredo D.R., Galhano V.M., Gomes-Laranjo J.C., Peixoto F.M., Alves A., Pereira M.J., Correia A. (2008) Molecular characterization of cyanobacterial diazotrophic strains from Portuguese shallow water bodies. (see details)
  65. Alves A., (2008) Using molecular methods to unravel hidden microbial diversity. (see details)
  66. Saraiva M., Alves A., Correia A., Sarmento A.C. (2008) Characterisation of extracellular enzymes from phytopathogenic fungi. (see details)
  67. Saraiva M., Alves A., Correia A., Sarmento A.C. (2008) A characterization of extracellular enzymes from Botryosphaeria spp. (see details)
  68. De Figueiredo, D.R., Galhano, V.M., Gomes-Laranjo, J.C., Peixoto, F.M., Alves, A., Pereira, M.J., Correia, A. (2008) Molecular characterization of cyanobacterial diazotrophic strains from Portuguese shallow water bodies. (see details)
  69. de Figueiredo D.R., Gonçalves A. M. M., Alves A., Gonçalves F., Pereira M.J., Correia A. (2007) Multilevel characterization of cyanobacterial strains for a further understanding on their ecology and bloom development. (see details)
  70. Moura A., Henriques I., Alves A., Correia A. (2007) Integron diversity in a wastewater environment. (see details)
  71. Henriques I., Fonseca F., Alves A., Correia A. (2007) Occurrence and diversity of tetracycline resistance genes in tetracycline-resistant gram-negative isolates from estuarine waters. (see details)
  72. Duarte S., Duarte S., Pascoal C., Pascoal C., Alves A., Alves A., Correia A., Correia A., Cássio F., Cássio F. (2006) Effects of copper and zinc mixtures on leaf decomposition by freshwater fungi and bacteria. (see details)
  73. Duarte S., Duarte S., Alves A., Alves A., Pascoal C., Pascoal C., Correia A., Correia A., Cássio F., Cássio F. (2006) Diversity and activity of fungi and bacteria on decomposing leaves in a low-order stream. (see details)
  74. Moura A, Henriques I., Alves A., Correia A. (2006) Prevalence, dissemination and characterization of integrons from a wastewater environment. (see details)
  75. Crous P.W., Slippers B., Wingfield M.J., Rheeder, J., Marasas, W.F.O., Phillips A.J.L., Alves A., Burgess T. (2006) Defining phylogenetic lineages in the Botryosphaeriaceae. (see details)
  76. Alves A., Phillips A.J.L., Henriques I., Correia A. (2006) Application of PCR fingerprinting techniques to distinguish botryosphaeriaceous fungi. (see details)
  77. Phillips A.J.L., Correia A., Alves A. (2006) What is Botryosphaeria? The current status of the genus. (see details)
  78. Carvalho M.J., Henriques I., Alves A., Saavedra M.J., Correia A. (2006) Aeromonas spp. in drinking water: diversity at the molecular level. (see details)
  79. Moura A., Henriques I., Alves A., Tacão M., Correia A. (2005) Methods for dissection of phylogenetic and molecular diversity in microbial assemblages and its applications. (see details)
  80. Henriques I., Alves A., Tacão M., Cunha A., Almeida A., Correia A. (2005) Genetic diversity and dynamics of free-living bacterial communities along an estuarine gradient (Ria de Aveiro, portugal). (see details)
  81. Henriques I., Moura A., Alves A., Saavedra M.J., Correia A. (2004) Environmental metagenomes as antibiotic resistance reservoirs: development and validation of molecular techniques to evaluate the diversity of beta-lactamase genes. (see details)
  82. Phillips A.J.L., Alves A., Correia A. (2004) Taxonomy and phylogeny of the plant pathogenic fungus genus Botryosphaeria. (see details)
  83. Alves A., Phillips A.J.L., Correia A. (2004) The Otthia spiraeae-Diplodia sarmentorum connection: combining morphological and molecular analyses to solve a fungal mystery. (see details)
  84. Alves A., Phillips A.J.L., Correia A. (2003) Phylogenetic analysis of chitin synthase genes from Phaeomoniella chlamydospora. (see details)
  85. Saavedra M.J., Rainho C., Novais S., Henriques I., Alves A., Correia A. (2003) Prevalence and antimicrobial multiresistance of Aeromonas strains isolated from drinking water in Portugal. (see details)
  86. Alves A., Queirós F., Phillips A.J.L., Correia A. (2003) Extracellular enzyme production by Botryosphaeria species isolated from Quercus spp. and other woody hosts. (see details)
  87. Phillips A.J.L., Alves A., Correia A. (2003) Exploring biodiversity in plant pathogenic fungi: the case of Botryosphaeria in Portugal. (see details)
  88. Alves A., Phillips A.J.L., Correia A. (2003) Botryosphaeria stevensii on Quercus species: a case of mistaken identity. (see details)
  89. Alves A., Phillips A.J.L., Correia A. (2002) Species of Botryosphaeria on Quercus suber L. and other Quercus species in Portugal: morphological and molecular characterisation. (see details)
  90. Alves A., Fragoeiro S., Phillips A.J.L., Correia A., Santos C. (2001) Extracellular enzyme production by Phaeoacremonium and Phaeomoniella strains isolated from grapevines. (see details)
  91. Henriques I., Alves A., Saavedra M.J., Correia A. (2001) Transposases from insertion sequences present in the genomes of Corynebacteria. (see details)
  92. Fragoeiro S., Alves A., Correia A., Phillips A.J.L., Santos C. (2001) Response of Vitis vinifera L. inoculated with Phaeoacremonium angustius and Phaeomoniella chlamydospora to thiabendazol, resveratrol and sodium arsenite. (see details)
  93. Alves A., Henriques I., Fragoeiro S., Phillips A.J.L., Santos C., Correia A. (2001) Utilização de sequências genómicas repetidas na tipagem de estirpes de fungos fitopatogénicos do género Phaeoacremonium. (see details)
  94. Henriques I., Alves A., Saavedra M. J., Correia A. (2001) Caracterização de uma carbapenemase de classe A numa estirpe não patogénica de Serratia fonticola. (see details)
  95. Novais S., Henriques I., Alves A., Rodrigues J., Correia A., Alves A., Saavedra M.J. (2001) Incidência de bacilos Gram negativo e alterações anatomopatológicas em truta arco-íris (Onchorhyncus mykiss). (see details)
  96. Henriques I., Alves A., Saavedra M.J., Correia A. (2001) SFC-A: uma nova carbapenemase de classe A em Serratia fonticola UTAD 54. (see details)
  97. Fragoeiro S., Alves A., Correia A., Costa A., Phillips A.J.L., Santos C. (2000) Biological activity of resveratrol against Phaeoacremonium, a fungus usually found in grapevines with esca syndrome. (see details)
  98. Alves A., Santos O., Henriques I., Pereira C., Correia A. (2000) PCR-based methods for fingerprinting of Brevibacterium and other related corynebacteria strains. (see details)
  99. Henriques I., Alves A., Gomes A. P., Saavedra M. J., Correia A. (2000) Characterization of a novel -lactamase from Serratia sp. (see details)
  100. Fragoeiro S., Manchego A., Alves A., Correia A., Phillips A.J.L., Santos C. (2000) Phaeoacremonium sp. filtrate reduces growth and membrane permeability in Vitis vinifera L. callus. (see details)
  101. Manchego A., Fragoeiro S., Alves A., Correia A., Phillips A.J.L., Santos C. (2000) Quantification of extracellular enzyme activity in Phaeoacremonium spp., the fungi involved in grapevine esca disease. (see details)
  102. Henriques I., Alves A., Gomes A.P., Saavedra M.J., Correia A. (2000) Characterization of a novel β-lactamase from Serratia sp. (see details)
  103. Alves A., Henriques I., Correia A., Coimbra M.A., Ferreira J.M. (1999) Caracterização de exopolissacarídeos microbianos produzidos por bactérias associadas a matérias primas argilosas. (see details)
  104. Henriques I., Alves A., Correia A. (1999) Metabolismo da metionina: produção de metanotiol em Brevibacterium linens. (see details)
  105. Fragoeiro S., Alves A., Correia A., Phillips A.J.L., Santos C. (1999) Caracterização bioquímica de Phaeoacremonium spp. isolado de videiras e estudo da sua virulência em videiras cultivadas in vitro. (see details)
  106. C Felix, M Nunes, A Andolfi, S Basso, MM Salvatore, MD Greca, A Correia, A Alves, AC Esteves Effect of temperature on the plant pathogen Lasiodiplodia theobromae: enzyme and secondary metabolites production. (see details)
  107. C Felix, A Andolfi, S Basso, MM Salvatore, MD Greca, A Correia, A Alves, AC Esteves Effect of temperature on production of secondary metabolites by Lasiodiplodia theobromae. (see details)
  108. M Nunes, C Félix, R Meneses, A Correia, A Alves, AC Esteves The effect of temperature on the expression of extracellular enzymes of Lasiodiplodia theobromae. (see details)
  109. Anabela Lopes, António Correia, Alan J.L. Phillips, Artur Alves. Mating type genes as phylogenetic markers to delimit Neofusicoccum species. (see details)
  110. Leite L., Artur A. Biological characterization of cultivable bacteria isolated from Manila clam. (see details)
  111. Santos L., Correia A., Phillips A.J.L., Alves A. Diaporthe species occurring on Rosaceae in Portugal. (see details)
  112. Mondello, V., Giambra, S., Conigliaro, G., Santos, L., Alves, A., Burruano, S. Taxonomy, pathogenicity and phylogeny of fungi associated with Botryosphaeria dieback in Sicily. (see details)
  113. Leite L., Jude-Lemeilleur F., Raymond N., Garabetian F., Alves A. Exploring the hologenome concept in Venerupis philippinarum (Manila clam). (see details)
  114. Araújo S., Silva I., Tacão M., Alves A., Henriques I. Antibiotic resistance in Escherichia coli from vegetables and irrigation water: a public health concern. . (see details)
  115. Araújo S., Silva I., Tacão M., Alves A., Henriques I. Antibiotic resistance in environmental Escherichia coli: a public health concern. (see details)
  116. Araújo S., Silva I., Tacão M., Alves A., Henriques I. Escherichia coli contamination in irrigation water and fresh produce: prevalence, molecular diversity and antibiotic resistance. . (see details)
  117. Araújo S., Tacão M., Leite L., Oliveira C., Alves A., Henriques I. Effect of metal contamination on antibiotic resistance traits in epiphytic bacteria. . (see details)
  1. Rodrigues L., Alves A., Davies G.R., Foing B.H., Stoker C., Clarke J., Correia A. (2013) Molecular characterization of rock microbial communities from the Mars analogue MDRS. EPSC Abstracts Vol. 8, EPSC2013-955, 2013. European Planetary Science Congress 2013; 8-13 September, London, UK. (see details)
    Link: http://meetingorganizer.copernicus.org/EPSC2013/EPSC2013-955.pdf
  2. Rodrigues L., Valente T.M., Foing B.H., Davies G.R., Correia A., Alves A. (2012) Geomicrobiology associated with formation of Fe-rich accretions in an extreme acidic environment. EPSC Abstracts Vol. 7 EPSC2012-797-3 2012. European Planetary Science Congress 2012; 23-28 September, Madrid, Spain. . (see details)
    Link: http://meetingorganizer.copernicus.org/EPSC2012/EPSC2012-797-3.pdf
  3. Rodrigues L., Foing B.H., Davies G.R., Stoker C., Clarke J., Correia A., Alves A. (2012) Lithic microbial communities from a Mars analogue site in Utah desert. EPSC Abstracts Vol. 7 EPSC2012-797-3 2012. European Planetary Science Congress 2012; 23-28 September, Madrid, Spain. (see details)
    Link: http://meetingorganizer.copernicus.org/EPSC2012/EPSC2012-801-3.pdf
  4. Rodrigues L., Valente T., Correia A., Alves A., Foing B.H., Davies G.R. (2012) Contribution of eukaryotic microbial communities to the formation of Fe-rich accretions in an extreme acidic environment. Geophysical Research Abstracts Vol. 14, EGU2012-14112, 2012. (see details)
    Link: http://meetingorganizer.copernicus.org/EGU2012/EGU2012-14112.pdf
  5. Rodrigues L., Davies G.R., Foing B.H., Correia A., Alves A., Valdivia-Silva J., Zavaleta J., Stoker C., Wilson D., Clarke J. (2011) Microbiological contamination assessment from drilling activities – recognition and design of prevention strategy. EPSC-DPS Joint Meeting 2011. La Cité Internationale des Congrès Nantes Métropole. 02 – 07 October 2011, Nantes, France. (see details)
    Link: http://adsabs.harvard.edu/abs/2011epsc.conf.1370R
  6. Alves, A., Henriques I., Santos A., Correia A. (2003) Tipagem genética de microrganismos – manual prático. Mestrado em Microbiologia Molecular, Aveiro. (see details)
    Link: http://sweet.ua.pt/~f426/Publicat.htm