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  Adelaide Almeida  
  Phone: 351 234 370784  
  e-mail: aalmeida@ua.pt  
  Category: Auxiliar Professor  
  Department: Biology  
  Research group: Marine and Estuarine Ecology
 
ISI Web of KnowledgeSM search factor: AU=(Almeida A OR Almeida MA OR Almeida MAP) and AD=(Aveiro and (Dep* Biol OR Biol Dept) not (Dept Biol and CCmar)) / Researcher ID=D-9899-2011  
  Direct URL for this page: http://www.cesam.ua.pt/adelaidealmeida  
     
Citation metrics

ResearcherID: http://www.researcherid.com/rid/D-9899-2011


Orcid ID: http://orcid.org/0000-0002-8422-8664


Scopus ID: http://www.scopus.com/authid/detail.url?authorId=7202913857


Google Académico: http://scholar.google.pt/citat.....twFRgAAAAJ


ResearchGate: www.researchgate.net/profile/Adelaide_Almeida/‎


Public key FCT: J0096517666

Professional career

Grant - Department of Biology, University of Aveiro (1988-1990) Trainee Assistant - Department of Biology, University of Aveiro (1990-1994) Assistant - Department of Biology, University of Aveiro (1994-2001) Auxiliary Teacher - Department of Biology, University of Aveiro (2001 -) Member of the CESAM (Center of Studies of the Environment and the Sea), Institute of Investigation of the University of Aveiro (since 2002) Auxiliary Teacher with definitive nomination - Department of Biology, University of Aveiro (since 11 of November of 2006)

Academic degrees

Degre in Biology for the University of Aveiro in 1988.


Tests of Pedagogical Aptitude and Scientific Capacity in 1994.


PhD in Biology by University of Aveiro in 2001

Area of scientific activity

Microbiology

Present research interests

New approaches to inactivate pathogenic microrganisms:



  • Photodynamic inactivation of bacteria, viruses and fungi

  • Phage teraphy to control pathogenic bacteria.


Importance of photochemical transformation of organic matter on bacterial abundance, activity and diversity.


Bacterial processes involved in the transference of organic carbon and nutrients in the aquatic environment.


Importance of bacteriophage infection on the bacterial community.


Phylogenetic composition of bacterial and viral communities. 


 

Name of the prize or award

  • Prize IMAR Luiz Saldanha 2002 with the paper “Short-time responses of the natural planktonic bacterial community to the changing water properties in an estuarine environment: ectoenzymatic activity, glucose incorporation and biomass production” de Cunha MA, Almeida MA, Alcântara F, published in Microbial Ecology 42:69-79.

  • Prize Clube Usuários SPME 2011, 2ª edition of the best work in SPME in 2011 with the study “Can volatile organic metabolites be used to simultaneously assess microbial and mite contamination level of cereal grains and coffee beans” of Salvador A, Baptista I, Barros A, Gomes N, Cunha A, Almeida A, Rocha S. Prize attributed in the Congresso Nacional de Cromatografia da Sociedade Portuguesa de Química, Porto de 9 a 11 de Janeiro 2011.

  • Responsible of a finalist project (30 projets selected from 600 applications) of the 5ª Edition Green Project Awards Portugal 2012 na category Investigation & Development, with the project“Terapia fágica como alternativa de baixo impacto ambiental para inativar bactérias patogénicas em pisciculturas”. Sponsoring entity Agência Portuguesa do Ambiente and Quercus - Associação Nacional de Conservação da Natureza.

  • Investigator of a finalist project of Salão Internacional de Agro-Negócios - SIAG 2012 selected for AGRO FOOD iTECH (20 projets selected of 600  applications). Sponsoring entity Rede INOVAR em colaboração com a Agência de Inovação (ADI).

  • Honorable mention of the 6ª Edição Green Project Awards Portugal 2013 in the category Investigation & Development, with the project “Terapia fotodinâmica na inactivação de microrganismos em águas residuais: uma tecnologia eficaz, de baixo custo e de reduzido impacto ambiental”. Sponsoring entity Agência Portuguesa do Ambiente and Quercus - Associação Nacional de Conservação da Natureza.                                                                                                          

    UroToday. http://www.urotoday.com/Infect.....tract.html. (Mai/2013)


    World Biomedical Frontiers. http://biomedfrontiers.org/infection-2013-10-37/ (Out/2013).


    Green Project Awards Portugal 2013, 6ª Edição. http://greensavers.sapo.pt/201.....com-lista/ (Nov/2013)


    ua_online journal. http://uaonline.ua.pt/pub/detail.asp?lg=pt&c=36096 (Nov/2013).


    Antena 1 radio, Click program. http://www.rtp.pt/play/podcast/384 (Jan/2014).


    Key scientific article on Global Medical Discovery. http://globalmedicaldiscovery.com/key-scientific-articles/nucleic-acid-changes-photodynamic-inactivation-bacteria-cationic-porphyrins/ (Mar/2014)


    ua_online journal. http://uaonline.ua.pt/pub/deta.....&lg=pt (Mar/2014)


    Jornal de notícias: http://www.diarioaveiro.pt/not.....esistentes (Mar/2014)


    ONLINE news: http://www.oln.pt/noticias.asp?id=27445&secc=1 (Mar/2014)


    Ciência de hoje: http://www.cienciahoje.pt/inde.....amp;op=all (Mar/2014


    Mentes que brilham in Porto Canal (May/2014)                                                                                                                       

Patents


    • Almeida MA, Cavaleiro JAS, Rocha J, Carvalho CMB, Costa LAS, Alves ESCF, Cunha MASDA, Tomé JPC, Faustino MAF, Neves MGPMS, Tomé AC, Lin Z, Rainho JPJ (2009) "Materiais híbridos nanomagnete-porfirina, processo para a sua síntese e respectiva aplicação em desinfecção de águas" Instituto de Propriedade Industrial, Lisboa, 2007, patente nº PT 103828 concedida em 21/09/09.

    • Rocha, SM, Costa V, Ferreira J, Almeida A, Cunha A, Gomes N, Stein P, Petronilho S, Baptista I. "Equipamento e processo de extracção por fluxo de contaminantes biológicos e químicos". Patente de invenção nacional n.º 105390, Data do pedido provisório: 22-11-2010.

    • Rocha, SM, Costa V, Ferreira J,Almeida A, Cunha A, Gomes N, Stein P, Petronilho S, Baptista I. "Equipment and flow extraction process of biological and chemical contaminants". International Patent: PCT (PT-PPI 42961-10), Data do pedido provisório: 10-12-2010.



 

Editorial Appointments

Academic Editor of Plos One (PLOS - Public Library of Science) (2014 - present)

Reviewer in International Journals

  • ACS Bioconjugate Chemistry

  • Acta Médica Portuguesa

  • African Journal of Microbiology Research

  • Annual Research & Review in Biology.

  • Antiviral Research

  • Aquaculture

  • Aquaculture Nutrition.

  • Aquatic Microorganisms Diseases

  • Archives of Virology

  • Asian Pacific Journal of Tropical Biomedicine.

  • Bioelectromagmetics

  • Biogeochemistry

  • Bioorganic & Medicinal Chemistry

  • BMC - Research Notes

  • BMC Veterinary Diseases

  • Chemistry and Ecology

  • Chemosphere

  • Diagnostic Microbiology and Infectious Disease.

  • Environmental Science: Processes & Impacts

  • Estuarine, Coastal and Shelf Science

  • European Journal of Medicinal Chemistry

  • Expert Review of Anti-infective Therapy

  • Gulf of Mexico Science

  • Hydrobiologia

  • Indian Journal of Marine Sciences  

  • International Journal of Infectious Diseases

  • International Journal of Photoenergy

  • Journal of Antivirals & Antiretrovirals

  • Journal of Biophotomics

  • Journal of Environmental Monitoring.

  • Journal of nanomedicine

  • Journal of Photochemistry and Photobiology A: Chemistry

  • Journal of Photochemistry and Photobiology B: Biology

  • Journal Plankton Research

  • Luminescence

  • Marine Drugs

  • Medicinal Research Reviews

  • Metabollomics

  • Microbial Biotechnology

  • Microbial Drug Resistance

  • Microbial Ecology

  • Microbiological Research

  • New Journal of Chemistry

  • Photochemistry and Photobiology

  • Photochemistry, Photobiology Science

  • Plos ONE

  • Purple Journal of Agricultural Research

  • Recent Patents on Anti-Infective Drug Discovery

  • Virology Journal

Scientific Supervision
Post-doc (Main Supervisor): Luísa Santos
Post-doc (Co-supervisor): Cláudia Oliveira

PhD (Main Supervisor): Carla Sofia Gomes Pereira
PhD (Main Supervisor): António Geraldes Martin Pinto
PhD (Main Supervisor): Yolanda José Silva
PhD (Main Supervisor): Ana Catarina Bispo Prata
PhD (Co-supervisor): Cátia Martins
(not a CESAM member)
PhD (Co-supervisor): Ana Filipa da Silva e Gomes

Master (Main Supervisor): Carina Coata
(not a CESAM member)
Master (Main Supervisor): Sónia Coimbra
(not a CESAM member)
Master (Main Supervisor): Beatriz Batista
(not a CESAM member)
Master (Main Supervisor): Tânia Costa
(not a CESAM member)
Master (Main Supervisor): Sara Pereira
(not a CESAM member)
Master (Main Supervisor): João Rocha
(ex-CESAM member)
Master (Co-supervisor): Helena Silva
(not a CESAM member)
Master (Co-supervisor): Mónica Oliveira
(not a CESAM member)

PhD (Main Supervisor): Eliana Alves
PhD (Main Supervisor): Liliana Costa
PhD (Main Supervisor): Luísa Santos

Master (Main Supervisor): Diana Lopes
(not a CESAM member)
Master (Main Supervisor): Lilia Mateus
(not a CESAM member)
Master (Main Supervisor): Cátia Susana Garrido Lobo Arrojado
(ex-CESAM member)
Master (Main Supervisor): Anabela Cristovão Tavares
(ex-CESAM member)
Master (Main Supervisor): Andreia Marques Ribeiro
(ex-CESAM member)
Master (Main Supervisor): Carla Sofia Gomes Pereira
Master (Main Supervisor): Daniela M. Silva Gonçalves
Master (Main Supervisor): Eliana Alves
Master (Main Supervisor): Liliana Costa
Master (Main Supervisor): Maria Inês Ramos Pilreira Baptista
Master (Main Supervisor): Carlos Miguel Mendes Cruz
(ex-CESAM member)
Master (Main Supervisor): Sofia Marlene Moreira Silva de Gouveia
(ex-CESAM member)
Master (Main Supervisor): Marlene António Pereira
(not a CESAM member)
Master (Main Supervisor): Ana Patrícia de Abreu Ribeiro Henriques
(not a CESAM member)
Master (Main Supervisor): José Machado
(not a CESAM member)
Master (Main Supervisor): Bruno Miguel Barbosa da Costa
(not a CESAM member)
Master (Main Supervisor): Sónia Sousa
(not a CESAM member)
Master (Main Supervisor): Joana Almeida
(not a CESAM member)
Master (Main Supervisor): Anabela Vieira
(not a CESAM member)
Master (Main Supervisor): Lara Rute Nunes Vilar Simões
(not a CESAM member)
Master (Main Supervisor): Sara Costa Figueiredo
(not a CESAM member)
Master (Main Supervisor): Inês Linhares
(not a CESAM member)
Master (Main Supervisor): Liliana Vieira
(not a CESAM member)
Master (Main Supervisor): Sónia Luísa Tomaz Meireles
(not a CESAM member)
Master (Main Supervisor): Luísa Alexandra Antunes Mariano
(not a CESAM member)
Master (Co-supervisor): Catarina Ferreira
(not a CESAM member)
Master (Co-supervisor): Ana Catarina Fernandes Moreirinha
Master (Co-supervisor): Ana Catarina Bispo Prata
Master (Co-supervisor): Ana Salomé Tavares Pereira
(ex-CESAM member)
Master (Co-supervisor): Olga Martins Saraiva
(ex-CESAM member)
Master (Co-supervisor): Paula Cristina Monteiro da Fonseca Vale
(ex-CESAM member)
Master (Co-supervisor): Nuno Filipe Cravo dos Santos
(not a CESAM member)
Master (Co-supervisor): Joana Trindade
(not a CESAM member)
Master (Co-supervisor): Carlos Jorge Figueiredo Simões
(not a CESAM member)
Master (Co-supervisor): António Nogueira
(not a CESAM member)
Master (Co-supervisor): Ana Flipa Quintela Vieira
(not a CESAM member)
Master (Co-supervisor): Cristina Santos
(not a CESAM member)
Master (Co-supervisor): Joana Brás Pereira
(not a CESAM member)
Master (Co-supervisor): Nuno Maia
(not a CESAM member)
Master (Co-supervisor): Nuno Ricardo Gonçalves da Silva
(not a CESAM member)
Master (Co-supervisor): Paula Costa
(not a CESAM member)
Master (Co-supervisor): Katherine Rodrigues
(not a CESAM member)
Master (Co-supervisor): Marta Valadas
(not a CESAM member)
Master (Co-supervisor): André Augusto Matos Saraiva
(not a CESAM member)
Master (Co-supervisor): Carolina Isabel Moura Pinheiro
(not a CESAM member)
Master (Co-supervisor): Ana Rita Manso Carvalho Tavares
(not a CESAM member)
Master (Co-supervisor): Carina Teixeira Moita
(not a CESAM member)
Master (Co-supervisor): Maria Adélia Machado Fernandes Reis
(not a CESAM member)
Master (Co-supervisor): Sandra Patrícia Mendes da Silva Mota
(not a CESAM member)

Investigador (Main Supervisor): Newton C. Marcial Gomes



Projects
Enviphage - Environmental impacts on bacterial ecology of bacteriophage use in aquaculture [see details]

Carne fresca com prazo de validade alargado e maior segurança microbiológica recorrendo à tecnologia de Altas Pressões (AP) – FRESHMEAT-AP [see details]

Impact of solar radiation on dissolved organic matter photochemical and microbial processes in the estuarine environment [see details]

LTER-RAVE - Long term monitoring in the Ria de Aveiro: towards a deeper understanding of ecological, environmental and economic processes [see details]

Phage therapy - a new technology to depurate shellfish - Depurofago [see details]

AQUASAFE - Development of new technologies to anticipate and diagnose disease outbreaks in aquaculture [see details]

RASTREMAR - Use of molecular tools in the traceability of marine food products [see details]

PTDC/CPE-CED/117516/2010 A study of academic development in universities through innovative approaches in teaching, assessment and feedback. [see details]

Rapid methods for the testing of tetrapyrrolic derivatives as photosensitizers for photodynamic antimicrobial therapy [see details]

Desenvolvimento de Novas Tecnologias de Suporte à Criação de Produtos Inovadores (NOVELTEC) [see details]

Phage therapy as a low environmental impact alternative to inactive phatogenic bacteria in fishfarming plants. [see details]

Global climate change and pollution: a synergy designed for disaster? [see details]

SWIMGLO - The Gloria-SWIM plate boundary Faults connection and its importance on the propagation of tectonic deformation and deep [see details]

Desenvolvimento de um equipamento de medição do nível/grau de higienização e fúngico de produtos alimentares e de embalagem – MicroMed. [see details]

MARMER: The role of salt marsh plants on mercury cycle. Identifying plant-bacteria-Hg interactions critical for ecosystem remediation [see details]

Dynamics of cyanobacteria and cyanotoxins in the Guadiana estuary - DYNCYANO [see details]

Publications
  1. Silva Y.J., Manco S., Costa R., Rodrigues V., Dias J., Ferreira H., Pousão-Ferreira P., Almeida A., Cunha A., Calado R., Gomes N.C.M. (in press) Effect of different culture conditions on the structural diversity of prokaryote communities in the sediment of earth ponds stocked with gilthead seabream Sparus aurata (Linnaeus, 1758). Aquaculture Research. 1-10. (see details) ISI paper
  2. Lopes D., Melo T., Santos N., Alves E., Gomes M.C., Cunha A., Neves M.G.P.M.S., Faustino M.A.F., Domingues M.R.M., Almeida A . (in press) Evaluation of the interplay among the charge of porphyrinic photosensitizers, lipid oxidation and photoinactivation efficiency in Escherichia coli. Journal Of Photochemistry And Photobiology B: Biology . (see details) ISI paper
  3. Oliveira V., Gomes N.C.M., Almeida A., Silva A.M.S., Silva H., Cunha A. (2014) Microbe-assisted phytoremediation of hydrocarbons in estuarine environments. Microbial Ecology (in Press). (see details) ISI paper
  4. Mendes C., Santos L., Cunha A., Gomes N.C.M., Almeida A. (2014) Proportion of prokaryotes enumerated as viruses by epifluorescence microscopy. Annals Of Microbiology. 64, 2, 773-778. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s13213-013-0713-y
  5. Silva Y.J., Costa L., Pereira C., Cunha A., Calado R., Gomes N.C.M., Almeida A. (2014) Influence of environmental variables in the efficiency of phage therapy in aquaculture. Microbial Biotechnology. 7, 5, 401-413. (see details) ISI paper
    Link: http://dx.doi.org/10.1111/1751-7915.12090
  6. Santos A.L., Baptista I., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha Â. (2014) Contribution of chemical water properties to the differential responses of bacterioneuston and bacterioplankton to ultraviolet-B radiation. Fems Microbiology Ecology. 87, 2, 517-535. (see details) ISI paper
    Link: http://onlinelibrary.wiley.com/doi/10.1111/1574-6941.12239/abstract
  7. Alves E., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Cunha A., Almeida A. (2014) An insight on bacterial cellular targets of photodynamic inactivation. Future Medicinal Chemistry. 6, 2, 141-164. (see details) ISI paper
    Link: http://dx.doi.org/10.4155/FMC.13.211
  8. Gomes N.C.M., Cleary D.F.R., Pires A.C.C., Almeida A., Cunha A., Mendonca-Hagler L.C.S., Smalla K. (2014) Assessing variation in bacterial, composition between the rhizospheres of two mangrove tree species. Estuarine Coastal And Shelf Science. 139, 40-45. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.ecss.2013.12.022
  9. Santos L., Santos A.L., Coelho F.J.R.C., Gomes N.C.M., Dias J.M., Cunha A., Almeida A. (2014) Heterotrophic activities of neustonic and planktonic bacterial communities in an estuarine environment (Ria de Aveiro). Journal Of Plankton Research. 36, 1, 230-242. (see details) ISI paper
    Link: http://dx.doi.org/10.1093/plankt/fbt084
  10. Mateus C., Costa C., Silva Y., Cunha A., Almeida A. (2014) Efficiency of phage cocktails in the inactivation of Vibrio in aquaculture. Aquaculture. 424, 167-173. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.aquaculture.2014.01.001
  11. Mesquita M., Menezes J., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S. , Cunha Â., Almeida A., Hackbarth S., Röder B., Faustino M.A.F. (2014) Photodynamic inactivation of bioluminescent Escherichia coli by neutral and cationic pyrrolidine-fused chlorins and isobacteriochlorins. Bioorganic & Medicinal Chemistry Letters. 24, 3, 808-812. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.bmcl.2013.12.097
  12. Almeida J., Tome J.P.C., Neves M.G.P.M.S., Tome A.C., Cavaleiro J.A.S., Cunha A., Costa L., Faustino M.A.F., Almeida A. (2014) Photodynamic inactivation of multidrug-resistant bacteria in hospital wastewaters: influence of residual antibiotics. Photochemical & Photobiological Sciences. 13, 4, 626-633. (see details) ISI paper
    Link: http://dx.doi.org/10.1039/c3pp50195g
  13. Pereira M.A., Faustino M.A.F., Tome J.P.C., Neves M.G.P.M.S., Tome A.C., Cavaleiro J.A.S., Cunha A., Almeida A. (2014) Influence of external bacterial structures on the efficiency of photodynamic inactivation by a cationic porphyrin. Photochemical & Photobiological Sciences. 13, 4, 680-690. (see details) ISI paper
    Link: http://dx.doi.org/10.1039/c3pp50408e
  14. Baptista I., Santos A.L., Pereira C., Santos L., Cunha A., Gomes N.C.M., Almeida A. (2014) Influence of incubation conditions on bacterial production estimates in an estuarine system. Aquatic Ecology. 48, 3, 327-336. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s10452-014-9487-y
  15. Oliveira V., Gomes N.C.M., Almeida A., Silva A.M.S., Simoes M.M.Q., Smalla K., Cunha A. (2014) Hydrocarbon contamination and plant species determine the phylogenetic and functional diversity of endophytic degrading bacteria. Molecular Ecology. 23, 6, 1392-1404. (see details) ISI paper
    Link: http://dx.doi.org/10.1111/mec.12559
  16. Santos L., Vaz L., Gomes N.C.M., Vaz N., Dias J.M., Cunha A., Almeida A. (2014) Impact of freshwater inflow on bacterial abundance and activity in the estuarine system Ria de Aveiro. Estuarine Coastal And Shelf Science. 138, 107-120. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.ecss.2013.12.021
  17. Mesquita M.Q., Menezes J.C.J.M.D.S., Pires S.M.G., Neves M.G.P.M.S., Simoes M.M.Q., Tomee A.C., Cavaleiro J.A.S., Cunha A., Daniel-Da-Silva A.L., Almeida A., Faustino M.A.F. (2014) Pyrrolidine-fused chlorin photosensitizer immobilized on solid supports for the photoinactivation of Gram negative bacteria. Dyes And Pigments. 110, 123-133. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.dyepig.2014.04.025
  18. Cruz A., Henriques I., Sousa A.C.A., Baptista I., Almeida A., Takahashi S., Tanabe S., Correia A., Suzuki S., Anselmo A.M., Mendo S. (2014) A microcosm approach to evaluate the degradation of tributyltin (TBT) by Aeromonas molluscorum Av27 in estuarine sediments. Environmental Research. 132, 430-437. (see details) ISI paper
  19. Mateus L., Costa L., Silva Y.J., Pereira C., Almeida A. (2014) Effect of lysozyme addition on the activity of phages against Vibrio parahaemolyticus. Aquaculture. 432, 125-129. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.aquaculture.2014.04.037
  20. Pereira S., Neves A.F., Almeida A. (2014) Hepatitis A Immunity in the District of Aveiro ( Portugal): An Eleven-year Surveillance Study (2002-2012). Viruses-basel. 6, 3, 1336-1345. (see details) ISI paper
    Link: http://dx.doi.org/10.3390/v6031336
  21. Alves E., Rodrigues J.M.M., Faustino M.A.F., Neves M.G.P.M.S., Cavaleiro J.A.S., Lin Z., Cunha A., Nadais M.H., Tome J.P.C., Almeida A. (2014) A new insight on nanomagnet-porphyrin hybrids for photodynamic inactivation of microorganisms. Dyes And Pigments. 110, 80-88. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.dyepig.2014.05.016
  22. Santos L., Santos E.B.H., Dias J.M., Cunha A., Almeida A. (2014) Photochemical and microbial alterations of DOM spectroscopic properties in the estuarine system Ria de Aveiro. Photochemical & Photobiological Sciences. 13, 8, 1146-1159. (see details) ISI paper
    Link: http://dx.doi.org/10.1039/c4pp00005f
  23. Costa L, Esteves AC, Correia A, Moreirinha C, Delgadillo I, Cunha Â, Neves MGPS, Faustino MAF, Almeida A (2014) SDS-PAGE and IR spectroscopy to evaluate modifications in the viral protein profile induced by a cationic porphyrinic photosensitizer. Journal Of Virological Methods. (see details) ISI paper
  24. Oliveira V., Gomes N.C.M., Cleary D.F.R, Almeida A., Silva A.M.S., Simões M.M.Q., Silva H., Cunha A. (2014) Halophyte plant colonization as a driver of the composition of bacterial communities in salt marshes chronically exposed to oil hydrocarbons. Fems Microbiology Ecology. (see details) ISI paper
  25. Alves E, Faustino MAF, Neves MGPMS, Cunha A, Nadais H, Almeida A (2014) Potential applications of porphyrins in photodynamic inactivation beyond the medical scope. Journal Of Photochemistry And Photobiology, C: Photochemistry Reviews. (see details) ISI paper
  26. Beirão S, Fernandes S, Coelho J, Faustino MAF, Tomé JP, Neves MGPMS, Tomé AC, Almeida A, Cunha A (2014) Photodynamic inactivation of bacterial and yeast biofilms with a cationic porphyrin. Photochemistry And Photobiology. (see details) ISI paper
  27. Baptista I, Queirós RP, Cunha Â, Rocha SM, Saraiva JÁ, Almeida A (2014) Evaluation of resistance development and viability recovery by toxigenic and non-toxigenic Staphylococcus aureus strains after repeated cycles of high hydrostatic pressure. Food Microbiology. (see details) ISI paper
  28. Oliveira J.M., Cunha A.S., Almeida A.P., Castilho F.B., Pereira M.J. (2013) Comparison of Methodologies for the Extraction of Bacterial DNA from Mussels-Relevance for Food Safety. Food Analytical Methods. 2013, 6, -201. (see details) ISI paper
  29. Oliveira J.M., Cunha A.S., Almeida A.P., Castilho F.B., Pereira M.J. (2013) Comparison of Methodologies for the Extraction of Bacterial DNA from Mussels-Relevance for Food Safety. Food Analytical Methods. 6, 1, 201-209. (see details) ISI paper
  30. Domingues P.M., Louvado A., Oliveira V., Coelho F.J., Almeida A., Gomes N.C.M., Cunha A. (2013) Selective cultures for the isolation of biosurfactant producing bacteria: comparison of environmental inocula and hydrophobic carbon sources. Preparative Biochemistry & Biotechnology. 43, 3, 237-55. (see details) ISI paper
  31. Gomes M.C., Silva S., Faustino M.A.F., Neves M.G.P.M.S., Almeida A., Cavaleiro J.A.S., Tomé J.P.C., Cunha A. (2013) Cationic galactoporphyrin photosensitisers against UV-B resistant bacteria: oxidation of lipids and proteins by 1O2. Photochemical & Photobiological Sciences. 12, 262–271 (see details) ISI paper
  32. Pinto R., Almeida A., Fernandes S.C.M., Freire C.S.R. , Silvestre A.J.D., Neto C.P., Trindade T. (2013) Antifungal activity of transparent nanocomposite thin films of pullulan and silver against Aspergillus niger. Colloids and Surfaces B: Biointerfaces. Colloids And Surfaces B: Biointerfaces. 103, 143-148. (see details) ISI paper
  33. Santos A.L., Oliveira V., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2013) Wavelength Dependence of Biological Damage Induced by UV Radiation on Bacteria. Archives Of Microbiology. 195, 1, 63-74. (see details) ISI paper
    Link: http://link.springer.com/content/pdf/10.1007/s00203-012-0847-5
  34. Costa L., Faustino M.A.F. , Tomé J.P.C., Neves M.G.P.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Almeida A. (2013) Involvement of type I and type II mechanisms on the photoinactivation of non-enveloped DNA and RNA bacteriophages. Journal Of Photochemistry And Photobiology B: Biology. 120, (see details) ISI paper
  35. Linhares I., Raposo T., Rodrigues A., Almeida A. (2013) Frequency and antimicrobial resistance patterns of bacteria implicated in community urinary tract infections: a ten-year surveillance study (2000-2009). Bmc Infectious Diseases. 13, (see details) ISI paper
    Link: DOI: 10.1186/1471-2334-13-19
  36. Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2013) Role of Transition Metals in UV-B Induced Damage to Bacteria. Photochemistry And Photobiology. 89, 3, 640-648. (see details) ISI paper
  37. Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2013) Growth conditions influence UVB sensitivity and oxidative damage in an estuarine bacterial isolate. Photochemical & Photobiological Sciences. 12, 974-986. (see details) ISI paper
  38. Salvador A., Baptista I., Barros A., Gomes N.C.M., Cunha A., Almeida A., Rocha S.M. (2013) Can volatile organic metabolites be used to simultaneously assess microbial and mite contamination level in cereal grains and coffee beans?. Plosone. 8, 4, e59338 (see details) ISI paper
  39. Henriques A., Sereno R., Almeida A. (2013) Reducing Salmonella horizontal transmission during egg incubation by phage therapy. Foodborne Pathogens And Disease. 10, 8, 718-722. (see details) ISI paper
  40. Coelho F.J.R.C., Santos A.L., Coimbra J., Almeida A., Cunha A., Cleary D.F.R., Calado R., Gomes N.C.M. (2013) Interactive effects of global climate change and pollution on marine microbes: the way ahead. Ecology And Evolution. 3, 6, 1808–1818 (see details) ISI paper
  41. Coelho F.J.R.C., Rocha R. J.M., Pires A.C.C., Ladeiro B., Castanheira J.M., Costa R., Almeida A., Cunha Â., Lillebø A.I., Ribeiro R., Pereira R., Lopes I., Marques C., Moreira-Santos M., Calado R., Cleary D.F.R., Gomes N.C.M. (2013) Development and validation of an experimental life support system for assessing the effects of global climate change and environmental contamination on estuarine and coastal marine benthic communities. Global Change Biology. 19, 8, 2584–2595 (see details) ISI paper
  42. Alves E., Faustino M. A. F., Tomé J .P.C., Neves M. G. P. S., Tomé A. C., Cavaleiro J. A. S., Cunha A., Newton G., Almeida A. (2013) Nucleic acid changes during photodynamic inactivation of bacteria by cationic porphyrins. Bioorganic & Medicinal Chemistry. 21, 14, 4311-4318. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.bmc.2013.04.065
  43. Alves E., Melo T., Simões C., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Cavaleiro J.A.S. , Cunha Â., Gomes N.C.M., Domingues P., Domingues M.R.M., Almeida A. (2013) Photodynamic oxidation of Staphylococcus warneri membrane phospholipids: new insights based on lipidomics. Rapid Communications In Mass Spectrometry. 27, 14, 1607-1618. (see details) ISI paper
    Link: http://dx.doi.org/10.1002/rcm.6614
  44. Santos A.L., Moreirinha C., Lopes D., Esteves A.C., Henriques I., Almeida A., Domingues M.R.M., Delgadillo I., Correia A., Cunha A. (2013) Effects of UV Radiation on the Lipids and Proteins of Bacteria Studied by Mid-Infrared Spectroscopy. Environmental Science & Technology. 47, 12, 6306-6315. (see details) ISI paper
    Link: http://pubs.acs.org/doi/abs/10.1021/es400660g
  45. Ribeiro A., Ramalheira E. , Cunha A., Gomes N.C.M., Almeida A. (2013) Incidence of Rotavirus and Adenovirus: Detection by Molecular and mmunological Methods in Human Faeces. Journal Of Pure And Applied Microbiology. 7, 3, (see details) ISI paper
  46. Alves E., Santos N., Melo T., Maciel E., Dória L., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A., Helguero L., Domingues P., Almeida A., Domingues M.R.M. (2013) Photodynamic oxidation of Escherichia coli membrane phospholipids: new insights based on lipidomics. Rapid Communications In Mass Spectrometry. 27, 23, 2717-2728. (see details) ISI paper
    Link: http://dx.doi.org/10.1002/rcm.6739
  47. Melo T., Santos N., Lopes D., Alves E., Maciel E., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Almeida A. , Domingues P. , Segundo M.A., Domingues M.R.M. (2013) Photosensitized oxidation of phosphatidylethanolamines monitored by electrospray tandem mass spectrometry. Journal Of Mass Spectrometry. 48, 12, 1357–1365 (see details) ISI paper
    Link: http://dx.doi.org/10.1002/jms.3301
  48. Cruz A., Oliveira V., Baptista I., Almeida A., Cunha A., Suzuki S., Mendo S. (2012) Effect of tributyltin (TBT) in the metabolic activity of TBT-resistant and sensitive estuarine bacteria. Environmental Toxicology. 27, 1, 11-17. (see details) ISI paper
    Link: http://www.ncbi.nlm.nih.gov/pubmed/20549634
  49. Oliveira C.S., Lázaro B., Azevedo J.N., Henriques I., Almeida A., Correia A. (2012) New Molecular Variants of Epsilon and Beta IncP-1 Plasmids are Present in Estuarine Waters. Plasmid. 67, 252-258. (see details) ISI paper
  50. Prata C., Ribeiro A., Cunha A., Gomes N.C.M., Almeida A. (2012) Ultracentrifugation as a direct method to concentrate viruses in environmental waters: virus-like particles enumeration as a new approach to determine the efficiency of recovery. Journal Of Environmental Monitoring. 14, 1, 64-70. (see details) ISI paper
  51. Cleary D.F.R., Oliveira V., Gomes N.C.M., Pereira A. , Henriques I., Marques B., Almeida A., Cunha A., Correia A., Lillebø A.I. (2012) Impact of sampling depth and plant species on local environmental conditions, microbiological parameters and bacterial composition in a mercury contaminated salt marsh. Marine Pollution Bulletin. 64, 2, 263-271. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.marpolbul.2011.11.020
  52. Louvado A., Coelho F.J.R.C., Domingues P., Gomes NCM, Santos A.L., Almeida A., Cunha A . (2012) Isolation of Surfactant-Resistant Pseudomonads from the Estuarine Surface Microlayer. Journal Of Microbiology And Biotechnology. 22, 3, 283–291 (see details) ISI paper
  53. Oliveira V., Santos A.L., Aguiar C., Santos L., Salvador A.C., Gomes N.C.M., Silva H., Rocha S.M., Almeida A., Cunha A. (2012) Prokaryotes in salt marsh sediments of Ria de Aveiro: effects of halophyte vegetation on abundance and diversity. Estuarine, Coastal And Shelf Science. 110, 61-68. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.ecss.2012.03.013
  54. Pereira J., Carvalho E., Faustino M., Fernandes R., Neves G., Cavaleiro J., Gomes N.C.M., Cunha A., Almeida A., Tomé J. (2012) Phthalocyanine thio-pyridinium derivatives as antibacterial photosensitizers. Photochemistry And Photobiology . 88, 3, 537-547. (see details) ISI paper
  55. Santos A.L., Oliveira V., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2012) Effects of UV-B Radiation on the Structural and Physiological Diversity of Bacterioneuston and Bacterioplankton. Applied And Environmental Microbiology. 78, 6, 2066-2069. (see details) ISI paper
    Link: http://aem.asm.org/content/early/2012/01/06/AEM.06344-11.abstract
  56. Santos A.L., Lopes S., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia, A., Cunha A.L. (2012) The UV Responses of Bacterioneuston and Bacterioplankton Isolates Depend on the Physiological Condition and Involve a Metabolic Shift. Fems Microbiology Ecology. 80, 3, 646-658. (see details) ISI paper
  57. Nogueira V., Lopes I., Rocha-Santos T., Santos A.L., Rasteiro G.M., Antunes F., Gonçalves F., Soares A.M.V.M., Cunha A., Almeida A., Gomes N.C.M., Pereira R. (2012) Impact of organic and inorganic nanomaterials in the soil microbial community structure. Science Of The Total Environment. 424, 344-350. (see details) ISI paper
    Link: http:dx.doi.org/10.1016/j.scitotenv.2012.02.041
  58. Pires A.C.C., Cleary D.F.R., Almeida A., Cunha Â., Dealtry S., Mendonça-Hagler L.C.S., Smalla K., Gomes N.C.M. (2012) Denaturing Gradient Gel Electrophoresis and Barcoded Pyrosequencing Reveal Unprecedented Archaeal Diversity in Mangrove Sediment and Rhizosphere Samples. Applied And Environmental Microbiology. 78, 16, 5520-5528. (see details) ISI paper
    Link: http://aem.asm.org/content/early/2012/05/30/AEM.00386-12.abstract
  59. Costa L., Faustino A., Faustino M.A.F., Cunha A., Neves M.G.P.M.S., Cunha A., Almeida A. (2012) Photodynamic Inactivation of Mammalian Viruses and Bacteriophages. Viruses. 4, 7, 1034-1074. (see details) ISI paper
  60. Vieira A., Yolanda S., Cunha A., Gomes N.C.M., Ackermann H., Almeida A. (2012) Phage therapy to control multidrug-resistant Pseudomonas aeruginosa skin infections: in vitro and ex vivo experiments. European Journal Of Clinical Microbiology & Infectious Diseases. 31, 11, 3241-3249. (see details) ISI paper
  61. Silva R., Tomé A., Tomé J., Neves M.G., Faustino M.A., Cavaleiro J.A., Oliveira A., Almeida A., Cunha A. (2012) Photo-inactivation of Bacillus endospores: inter-specific variability of inactivation efficiency. Microbiology And Immunology. 56, 10, 692-699. (see details) ISI paper
  62. Costa L., Tomé J.P.C., Neves M.G.P.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Faustino M.A.F., Almeida A. (2012) Susceptibility of non-enveloped DNA- and RNA-type viruses to photodynamic inactivation. Photochemical & Photobiological Sciences. 11, 10, 1520-1523. (see details) ISI paper
  63. Costa D.C.S., Gomes M.C., Faustino M.A.F., Neves M.G.P.M.S., Cunha A., Cavaleiro J.A.S., Almeida A., Tomé J.P.C. (2012) Comparative photodynamic inactivation of antibiotic resistant bacteria by first and second generation cationic photosensitizers. Photochemical & Photobiological Sciences . 11, 12, 1905-1913. (see details) ISI paper
  64. Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2012) Contribution of reactive oxygen species to UV-B-induced damage in bacteria. Journal Of Photochemistry And Photobiology B: Biology. 117, 40-46. (see details) ISI paper
  65. Gonçalves G., Gouveia G., Mesquita J.R., Almeida A., Ribeiro A., Pereira J., Nascimento M.S.J. (2011) Outbreak of acute gastroenteritis in a kindergarten in the north of Portugal by adenovirus type 41. Epidemiology And Infection . 139, , 1672-1675. (see details) ISI paper
    Link: http://dx.doi.org/10.1017/S0950268810002803
  66. Santos A.L., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2011) Effects of ultraviolet radiation on the abundance, diversity and activity of bacterioneuston and bacterioplankton: insights from microcosm studies. Aquatic Sciences - Research Across Boundaries. 73, 1, 63-77. (see details) ISI paper
  67. Santos A.L., Lopes S., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2011) Diversity in UV-Sensitivity and Recovery Potential among Bacterioneuston and Bacterioplankton Isolates. Letters In Applied Microbiology. 52, 4, 360-366. (see details) ISI paper
  68. Pereira C., Salvador S., Arrojado C., Silva Y.J., Santos A.L., Cunha A., Gomes N.C.M., Almeida A. (2011) Evaluating seasonal dynamics of bacterial communities in marine fish aquaculture: a preliminary study before applying phage therapy. Journal Of Environmental Monitoring. 13, 4, 1053-1058. (see details) ISI paper
    Link: http://pubs.rsc.org/en/Content/ArticleLanding/2011/EM/c0em00434k
  69. Baptista I., Santos A.L., Cunha A., Gomes N.C.M., Almeida A. (2011) Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation. Aquatic Microbial Ecology. 62, 3, 299-310. (see details) ISI paper
  70. Coelho F.J.R.C., Sousa S., Santos L., Santos A.L., Almeida A., Gomes N.C.M., Cunha A. (2011) Exploring hydrocarbonoclastic bacterial ­communities in the estuarine surface microlayer. Aquatic Microbial Ecology. 64, 185-195. (see details) ISI paper
    Link: http://www.int-res.com/abstracts/ame/v64/n2/p185-195/
  71. Alves E., Faustino M.A.F., Tome J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Almeida A. (2011) Photodynamic antimicrobial chemotherapy in aquaculture: photoinactivation studies of Vibrio fischeri. Plos One. 6, 6, e20970 (see details) ISI paper
    Link: http://dx.doi.org/10.1371/journal.pone.0020970
  72. Santos L.M.P., Santos A.L., Coelho F.J.R.C., Gomes N.C.M., Dias J.M., Cunha A., Almeida A. (2011) Relation between bacterial activity in the surface microlayer and estuarine hydrodynamics. Fems Microbiology Ecology. 77, 3, 636-646. (see details) ISI paper
    Link: http://onlinelibrary.wiley.com/doi/10.1111/j.1574-6941.2011.01147.x/abst...
  73. Costa L., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C, Cavaleiro J.A.S., Faustino M.A.F., Cunha A., Gomes N.C.M., Almeida A. (2011) Evaluation of resistance development and viability recovery by a non-enveloped virus after repeated cycles of aPDT. Antiviral Research. 91, 3, 278-282. (see details) ISI paper
  74. Tavares A., Carvalho C.M.B., Faustino M.A., Neves M.G.P.M.S., Tomé J.P., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Alves E., Almeida A. (2011) Mechanisms of Photoinactivation of Gram-negative recombinant bioluminescent bacteria by cationic porphyrins. Photochemical & Photobiological Sciences. 10, 10, 1659-1669. (see details) ISI paper
    Link: http://dx.doi.org/10.1039/C1PP05097D
  75. Arrojado C., Tavares C., Pereira C., Tomé J. P. C., Faustino M.A.F., Neves M.G.P., Tomé A.C., Cavaleiro J.A.S., Calado R., Cunha A., Gomes N.C.M., Almeida A. (2011) Applicability of photodynamic antimicrobial chemotherapy as an alternative to inactivate fish pathogenic bacteria in aquaculture systems. Photochemical & Photobiological Sciences. 10, 10, 1691-1700. (see details) ISI paper
  76. Gomes M.C., Woranovicz-Barreira S.M., Tomé J.P.C., Faustino M.A.F., Cavaleiro J.A.S., Gomes N.C.M., Almeida A., Cunha A. (2011) Photodynamic inactivation of Penicillium chrysogenum conidia by cationic porphyrins. Photochemical & Photobiological Sciences. 10, 11, 1735-1743. (see details) ISI paper
    Link: http://dx.doi.org/10.1039/C1PP05174A
  77. Alves E., Costa L., Cunha Â., Faustino M.A.F., Neves M.G.P.M.S., Almeida A. (2011) Bioluminescence and its application in the monitoring of antimicrobial photodynamic therapy. Applied Microbiology And Biotechnology. 92, 6, 1115-1128. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s00253-011-3639-y
  78. Pereira C., Silva Y., Santos A.L., Gomes N.C.M., Cunha A., Almeida A. (2011) Bacteriophages with potential for inactivation of fish pathogenic bacteria: survival, host specificity and effect on bacterial community structure. Marine Drugs. 9, 11, 2236-2255. (see details) ISI paper
  79. Costa L., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Almeida A. (2010) Sewage bacteriophage inactivation by cationic porphyrins: influence of light parameters. Photochemical And Photobiological Sciences. 9, 8, 1126-1133. (see details) ISI paper
  80. Nogueira A., Cardoso M. , Delgadillo I., Almeida A. (2010) Evaluation of the microbiological quality of drinking-water in the District of Bragança (Northwest Portugal) throughout a ten year period (1996-2005), during the implementation of the 1998/83 EC Directive. Journal Of Environmental Quality. 39, 2, 609-616. (see details) ISI paper
    Link: http://jeq.scijournals.org/cgi/content/abstract/39/2/609
  81. Tavares A., Carvalho C.M.B., Faustino M.A., Neves M.G.P.M.S., Tomé J.P.C., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Alves E., Almeida A. (2010) Antimicrobial Photodynamic Therapy: Study of Bacterial Recovery Viability and Potential Development of Resistance after Treatment. Marine Drugs. 8, 1, 91-105. (see details) ISI paper
    Link: http://dx.doi.org/10.3390/md8010091
  82. Carvalho C.M.B., Alves E., Costa L., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Almeida A., Cunha A., Lin Z., Rocha J. (2010) Functional Cationic Nanomagnet-Porphyrin Hybrids for the Photoinactivation of Microorganisms. Acs Nano. 4, 12, 7133–7140 (see details) ISI paper
    Link: http://dx.doi.org/10.1021/nn1026092
  83. Gomes N.C.M., Cleary D.F.R., Pinto F.N., Egas C., Almeida A., Cunha A., Mendonça-Hagler L.C.S., Smalla K. (2010) Taking root: enduring effect of rhizosphere bacterial colonization in mangroves. Plos One. 5, 11, e14065 (see details) ISI paper
    Link: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0014065
  84. Lopes J.F., Almeida M.A., Cunha M.A. (2010) Modelling the ecological patterns of a temperate lagoon in a very wet spring season. Ecological Modelling. 221, 19, 2302-2322. (see details) ISI paper
    Link: http://dx.doi.org/10.1016/j.ecolmodel.2010.06.009
  85. Oliveira V., Santos A.L., Coelho F., Gomes N.C.M., Silva H., Almeida A., Cunha A. (2010) Effects of monospecific banks of salt marsh vegetationon sediment bacterial communities. Microbial Ecology. 60, 1, 167–179 (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s00248-010-9678-6
  86. Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Costa L., Alves E., Oliveira A., Cunha Â., Almeida A. (2009) Antimicrobial photodynamic activity of porphyrin derivatives: potential application on medical and water disinfection. Journal Of Porphyrins & Phthalocyanines. 13, 5, 575-577. (see details) ISI paper
    Link: http://dx.doi.org/10.1142/S1088424609000528
  87. Oliveira A., Almeida A., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A. (2009) Porphyrin derivatives as photosensitizers for the inactivation of Bacillus cereus endospores. Journal Of Applied Microbiology. 106, 1986–1995 (see details) ISI paper
  88. Cunha A., Almeida A. (2009) Inorganic nutrient regulation of bacterioplankton heterotrophic activity in an estuarine system (Ria de Aveiro, Portugal). Hydrobiologia. 628, 1, 81-93. (see details) ISI paper
  89. Alves E., Costa L., Carvalho C. M. B., Tomé J. P. C., Faustino M. A. F., Neves M. G. P. S., Tomé A. C., Cavaleiro J. A. S., Cunha A., Almeida A. (2009) Charge effect on the photoinactivation of Gram-negative and Gram-positive bacteria by cationic porphyrins. Bmc Microbiology . 9, 1, 70 (see details) ISI paper
    Link: http://dx.doi.org/10.1186/1471-2180-9-70
  90. Almeida A., Cunha Â., Gomes N.C.M., Alves E., Costa L., Faustino M.A.F. (2009) Phage therapy and photodynamic therapy: low environmental impact approaches to inactivate microorganisms in fish farming plants. Marine Drugs. 7, 268-313. (see details) ISI paper
    Link: http://dx.doi.org/10.3390/md7030268
  91. Santos A.L., Mendes C., Gomes N.C.M., Henriques I., Correia A., Almeida A., Cunha A. (2009) Short-term variability of abundance, diversity and activity of estuarine bacterioneuston and bacterioplankton. Journal Of Plankton Research. 31, 12, 1545-1555. (see details) ISI paper
  92. Lopes A. R., Azeiteiro U., Bessa V.S., Pereira C., Salvador S., Almeida A., Pereira M.J. (2009) Spring pelagic communties of phytoplankton, cyanobacteria, associated heterotrophic bacteria and viruse in an eutrophic shallow temperate lake. Fresenius Environmental Bulletin. 18, 5b, 875-884. (see details) ISI paper
  93. Fateixa S., Neves M.C. , Almeida.A., Neto C.P. , OliveiraJ . , Trindade T. (2009) Antifungal activity of SiO2/Ag2S nanocomposites against Aspergillus niger. Colloids and Surfaces B: Biointerfaces. 74, 304–308 (see details) ISI paper
  94. Costa L., Alves E., Carvalho C. M. B., Tomé J. P. C., Faustino M .A. F., Neves M. G. P. S., Tomé A .C., Cavaleiro J .A. S., Cunha A., Almeida A. (2008) Sewage bacteriophage photoinactivation by cationic porphyrins: a study of charge effect. Photochemical & Photobiological Sciences. 7, 4, 415 – 422 (see details) ISI paper
    Link: http://dx.doi.org/10.1039/B712749A
  95. Alves E., Carvalho C. M. B., Tomé J. P. C., Faustino M. A. F., Neves M .G .P. S., Tomé A. C., Cavaleiro J. A. S., Cunha Â., Mendo S., Almeida A. (2008) Photodynamic inactivation of recombinant bioluminescent Escherichia coli by cationic porphyrins under artificial and solar irradiation. Journal Of Industrial Microbiology And Biotechnology. 35, 11, 1447-1454. (see details) ISI paper
    Link: http://dx.doi.org/10.1007/s10295-008-0446-2
  96. Almeida M.A., Cunha M.A., Dias J. (2007) Bacterial productivity distribution during a rainy year in an estuarine system. Microb Ecol. 53, 208–220 (see details) ISI paper
  97. Santos L., Cunha M .A., Silva H., Caçador I., Dias J.M., Almeida M.A . (2007) Influence of salt marsh on the bacterial activity in two estuaries with different hydrodinamic characteristics (Ria de Aveiro and Tagus Estuary). Fems Microbiol Ecol. 60, 3, 429-441. (see details) ISI paper
  98. Almeida A., Cunha MA, Sobral P, Fernandes S, Alcântara F (2007) Copper effects on bacterial activity of estuarine silty sediments. Estuar Coast Shelf S. 73, 3-4, 743-752. (see details) ISI paper
  99. Carvalho C., Gomes A., Fernandes S., Prata A., Almeida M. A., Cunha M.A., Tomé J., Faustino M. A., Neves M. G., Tomé A., Cavaleiro J. A., Lin Z., Rainho J., Rocha J. (2007) Photoinactivation of bacteria in wastewater by porphyrins: Bacterial -galactosidase activity and leucine-uptake as methods to monitor the process. Journal Of Photochemistry And Photobiology B: Biology. 88, 112–118 (see details) ISI paper
  100. Henriques I., Alves A., Tacão M., Almeida A., Cunha A., Correia A. (2006) Genetic diversity and dynamics of free-living bacterial community along an estuarine gradient (Ria de Aveiro, Portugal). Estuarine Coastal And Shelf Science . 68, 139-148. (see details) ISI paper
  101. Cunha A., Almeida A., Ré A., Martins A., Alcântara F. (2006) Perylene toxicity in the estuarine environment of Ria de Aveiro (Portugal). Ecotoxicology. 2, 15, 171-185. (see details) ISI paper
  102. Cunha A., Almeida A. (2006) Influence of an estuarine plume and a marine sewage outfall on the dynamics of coastal bacterioplankton communities. Aquatic Microbial Ecology. 44, 253-262. (see details) ISI paper
  103. Almeida M.A., Cunha M.A., Alcântara F. (2005) Relationship of bacterioplankton production with primary production and respiration in a shallow estuarine system (Ria de Aveiro, NW Portugal). Microbiological Research. 3, 160, 315-328. (see details) ISI paper
  104. Cunha M.A., Pedro R., Almeida A., Silva H. (2005) Activity and growth efficiency of heterotrophic bacteria in a salt marsh (Ria de Aveiro, Portugal). Microbiological Research. 3, 160, 279-290. (see details) ISI paper
  105. Henriques I ., Almeida A., Cunha A., Correia A. (2004) Molecular sequence analysis of prokariotic diversity in the micdle and outer sections of the Portuguese estuary Ria de Aveiro. Fems Microbiology Ecology. 49, 269-279. (see details) ISI paper
  106. Cunha M.A., Dias J.M., Adelaide M.A., Lopes J.F., Alcântara F. (2003) Fluxes of Bacterioplankton Between a Tidal Estuary and the Sea: Returning to the “Outwelling Hypothesis. Aquatic Ecology. 37, 45-54. (see details) ISI paper
    Link: http://www.springerlink.com/content/u80403j876858260/fulltext.pdf
  107. Cunha M.A., Almeida M.A., Alcântara F. (2003) Ectoenzymatic activity and glucose heterotrophic metabolism in a shallow estuary (Ria de Aveiro, Portugal): influence of bed sediments and salt marshes. Acta Oecologica. 24, S97-S107. (see details) ISI paper
  108. Almeida M.A., Cunha M.A., Alcântara F. (2002) Seasonal change in the proportion of bacterial and phytoplankton production along a salinity gradient in a shallow estuary. Hydrobiologia. 475/476, 251-262. (see details) ISI paper
  109. Almeida M.A., Cunha M.A., Alcântara F. (2002) Is bacterioplankton production on the Ria de Aveiro influenced by of salt marshes and bed sediment?. Aquatic Ecology. 36, 4, 469-482. (see details) ISI paper
  110. Almeida M. A., Cunha M. A., Alcântara F. (2001) Physiological responses of marine and brackish water bacterial assemblages in a tidal estuary (Ria de Aveiro, Portugal). Aquat Microb Ecol 25:113-125. Aquat Microb Ecol . 25, 113-125. (see details) ISI paper
  111. Almeida M.A., Cunha M.A., Alcântara F. (2001) Factors influencing bacterial production in a shallow estuarine system. Micro Ecol . 3, 42, 416-426. (see details) ISI paper
  112. Almeida M.A., Cunha M.A., Alcântara F. (2001) Loss of estuarine bacteria by viral infection and predation in microcosm conditions. Microb Ecol . 4, 42, 562-571. (see details) ISI paper
  113. Cunha M.A., Almeida M.A., Alcântara F. (2001) Short-time responses of the natural planktonic bacterial community to the changing water properties in an estuarine environment: ectoenzymatic activity, glucose incorporation and biomass production. Microbial Ecology. 1, 41, 69-79. (see details) ISI paper
  114. Cunha M.A., Almeida M.A., Alcântara F. (2000) Patterns of ectoenzymatic and heterotrophic bacterial activities along a salinity gradient in a shallow tidal estuary. Marine Ecology Progress Series. 204, 1-Dec. (see details) ISI paper
  115. Cunha M.A., Almeida M.A., Alcântara F. (1999) Compartments of oxygen consumption in a tidal mesotrophic estuary. Acta Oecologica. 4, 20, 227-235. (see details) ISI paper
  116. Alcântara F., Almeida M.A. (1995) Virological quality of the Ria de Aveiro: validity of potential microbial indicators. Netherlands Journal Of Aquatic Ecology . 29 , 3-4, 419-425. (see details) ISI paper
  117. Almeida MA.., Alcântara F. (1992) Bacterial Colonization of Seston Particles in Brackish Waters (Ria de Aveiro, Portugal). Mar Ecol Prog Ser . 89, 165-173. (see details) ISI paper
  1. Almeida A., Alves E., Costa C., Cunha A., Tomé J., Tomé A.C. , Faustino M.A.F. , Neves M.G.P.M., Cavaleiro J.A.S. (2012) Photodynamic inactivation of pathogenic microorganisms in the environment: an efficient, cost-effective and sustainable technology. Microbiologia. Online, 2, (see details)
  2. Vieira L., Almeida A. (2012) The cytology and DNA detection by the PapilloCheck® test in the diagnosis of Human Papillomavirus Infection. European Journal Of Microbiology And Immunolgy. (see details)
  3. Nogueira A., Cardoso M., Delgadillo I., Almeida A. (2009) Qualidade microbiológica e química das águas de consumo humano do Distrito de Bragança. Revista De Saúde Pública Portuguesa. (see details)
  4. Pato P., Pinto C., Cunha A., Almeida A., Pereira M.E., Vale C., Duarte A.C. (2004) Tidal variability in the transport of particulate mercury. Rmz - Materials And Geoenvironment. 51, 1, 1300-1303. (see details)
  5. Cunha M.A., Almeida M.A., Alcântara F. (1999) Variação da actividade bacteriana ao longo de um gradiente de salinidade. Revista De Biologia. 17, 1-4, 261-273. (see details)
  6. Almeida M.A., Cunha M.A., Alcântara F. (1998) Estratificação da Produtividade de Biomassa Bacteriana em Águas Estuarinas (Ria de Aveiro). Revista De Biologia . 16 , 1-4, 227-228. (see details)
  7. Alcântara F., Almeida M.A . (1988) Alcântara F, Almeida MA (1988) Coliformes no Canal de Mira: Comparação dos teores na Água, Sedimento e em Cardium edule (L); Variação Geográfica e Flutuação Sazonal. Rev Biol U Aveiro. 2, 87-105. (see details)
  1. Almeida A., Alves F.L., Bernardes C., Dias J.M., Gomes N.C.M., Pereira E., Queiroga H., Serôdio J., Vaz N. (2011) Actas das Jornadas da Ria de Aveiro 2011. Aveiro. Universidade de Aveiro, CESAM – Centro de Estudos do Ambiente e do Mar. 978-972-789-337-9. (see details)
  2. Rodrigues A.M., Quintino V., Pinho R., Lourenço A., Lopes M.L., Leão F., Oliveira J., Almeida M.A., Cunha M.A., Pereira R. (2008) Descobrindo a Biodiversidade na Cidade (e-book). Aveiro. Universidade de Aveiro. 13:978-972-789-268-6. (see details)
  3. Alcântara F., Cunha A., Almeida A. (1996) Microbiologia - Práticas Laboratoriais. Aveiro. 972-789-038-5. (see details)
  1. Almeida A., Cunha A., Faustino A., Tomé A., Neves G. (2010) Porphyrins as antimicrobial photosensitising agents. . In: Photodynamic inactivation of microbial pathogens. Medical and environmental applications. (see details)
  2. Cunha A., Almeida A., Coelho F.J.R.C., Gomes N.C.M., Oliveira V., Santos A.L. (2010) Bacterial Extracellular Enzymatic Activity in Globally Changing Aquatic Ecosystems. In: Research, Technology and Education Topics in Applied Microbiology and Microbial Biotechnology. Badajoz. Formatex. 2, (see details)
  3. Santos A.L., Baptista I., Oliveira V., Henriques I, Gomes N.C.M., Almeida A., Correia A., Cunha A. (2010) Oxidative stress induced by photochemical reactions occuring at the surface microlayer. In: Microorganisms in Industry and Environment: From Scientific and Industrial Research to Consumer Products. Singapore. World Scientific Publishing. 978-981-4322-10-2. (see details)
  4. F.J.R.C. Coelho, S. Sousa, L. Santos, A. L. Santos, A. Almeida, N. C. M. Gomes, Â. Cunha (2010) PAH Degrading Bacteria in an Estuarine System. In: Studies on Environmental Chemistry-Biological Responses to Contaminants. Tokyo. © by TERRAPUB. (see details)
    Link: http://www.terrapub.co.jp/onlineproceedings/ec/03/index.html
  5. A. Louvado , A. L. Santos , F. Coelho, S. Sousa, A. Moreira, F. Gomes, A. Almeida, N. C. M. Gomes, Â. Cunha (2010) Isolation of Surfactant-Resistant Bacteria from the Surface Microlayer. In: Interdisciplinary Studies on Environmental Chemistry-Biological Responses to Contaminants. Tokyo. © by TERRAPUB. (see details)
    Link: http://www.terrapub.co.jp/onlineproceedings/ec/03/pdf/BR_03089.pdf
  6. Oliveira A., Almeida A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A.C., Cavaleiro J., Cunha A. (2009) Assessment of the performance of porphyrin derivatives as photosensitizers for the inactivation of bacterial endospores. In: Current Research Topics in Applied Microbiology and Microbial Biotechnology. Singapore. World Scientific Publishing Co. (see details)
  7. Costa L., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Lin Z., Rainho J.P., Rocha J., Cunha A., Almeida A. (2007) Sewage bacteriophage photoinactivation by immobilized porphyrins in solid matrixes. In: Current Research Topics in Applied Microbiology and Microbial Biotechnology. Singapore. World Scientific Publishing Co. (see details)
  8. Almeida A., Cunha A., Santos L., Salvador S., Gomes A. (2007) Evaluation of the impact of two aquaculture systems on bacterial communities of the estuarine system Ria de Aveiro. In: Current Research Topics in Applied Microbiology and Microbial Biotechnology. Singapore. World Scientific Publishing Co. (see details)
  9. Cunha A., Almeida A., Ré A., Martins A., Alcântara F. (2006) Perylene toxicity in the estuarine environment of Ria de Aveiro (Portugal). In: Modern Multidisciplinary Applied Microbiology - Exploiting Microbes and their Interactions. Weinheim. Wiley-VCH Verlag GmbH & Co. KGaA. ISBN-13: 978-3-527-31611-3. (see details)
  10. Costa L, Faustino MAF, Neves MGPMS, Cunha A, Almeida A Photodynamic inactivation of mammalian viruses and bacteriophages. In: MDPI, Basel, Switzerland. (EDS.), Recent progress in bacteriophage research. 77-117. 978-3-906980-40-9. (see details)
  1. Pinto A.G.M. (em curso) Impact of UV-radiation on photochemical and microbial processes in estuarine environment. PhD Thesis. [supervisor] (see details)
  2. Silva Y.J. (em curso) Phage therapy, as a low environmental impact alternative to inactive pathogenic bacteria in fish-farming plants. PhD Thesis. [supervisor] (see details)
  3. Prata A.C.B. (em curso) Marine surface microlayer as a source of viruses. PhD Thesis. [supervisor] (see details)
  4. Santos N.F.C. dos (2013) Estudo da Foto Oxidação de Fosfatidiletanolaminas. MSc Thesis. (see details)
  5. Alves E.F. (2013) Evaluation of faecal bacteria photoinactivation in a pilot plant through a rapid method. PhD Thesis. (see details)
  6. Alves E. S. C. F. (2013) Inativação fotodinâmica de bactérias por porfirinas catiónicas: os seus alvos celulares e potenciais aplicações ambientais. PhD Thesis. (see details)
  7. Trindade J.A.R. (2013) Métodos Alternativos de Deteção de Salmonela e Listeria monocytogenes. MSc Thesis. (see details)
  8. Lopes D.C.S. (2013) Efeito da carga do fotossensibilizador em lípidos de Escherichia coli. MSc Thesis. (see details)
  9. Mateus L.C.S. (2013) Phage therapy in aquaculture: use of phage cocktails and lysozyme. MSc Thesis. (see details)
  10. Santos L. (2013) Hydrological and photochemical influence on dynamics of estuarine bacteria. PhD Thesis. [supervisor] (see details)
  11. Costa L.A. (2012) Inactivation of sewage viruses by a novel photochemical technique. PhD Thesis. [supervisor] (see details)
  12. Costa B. (2010) Terapia fágica: Perspectivas na aplicação clínica. MSc Thesis. (see details)
    Link: http://hdl.handle.net/10773/3522
  13. Gouveia Sofia Marlene Moreira Silva de (2009) Incidência e Prevalência do HPV em Mulheres com Citologias cérvico-vaginais normais. MSc Thesis. [supervisor] (see details)
  14. Cruz Carlos Miguel Mendes (2009) Quantificação de bactérias no ambiente aquático: determinação da fracção de vírus incluída nas contagens de bactérias por microscopia de epifluorescência. MSc Thesis. [supervisor] (see details)
  15. Ribeiro, Andreia Marques (2009) Epidemiologia molecular de adenovirus: detecção em águas de superfície, em águas residuais e em águas doces. MSc Thesis. [supervisor] (see details)
  16. José Machado da Costa Eduardo (2008) Caracterização genética de Giardia lamblia de origem humana e animal em Portugal. MSc Thesis. [supervisor] (see details)
    Link: http://ria.ua.pt/handle/10773/866
  17. Gonçalves D. (2008) Pesquisa de SBL na comunidade. MSc Thesis. [supervisor] (see details)
  18. Almeida A. (2001) Crescimento e Mortalidade do Bacterioplâncton em Ambiente Estuarino (Ria de Aveiro). PhD Thesis. (see details)
    Link: http://hdl.handle.net/10773/4414
  19. Almeida, A. (1994) Poluição Viral na Ria de Aveiro: Indicadores Bacterianos e Bacteriofágicos. Aveiro. Bepartamento de Biologia - Universidade de Aveiro. (see details)
  20. Almeida A. (1994) Morfologia e Infecção Bacteriofágica. Aveiro. Departamento de Biologia - Universidade de Aveiro. (see details)
  1. Alves E., Melo T., Santos N., Simões C., Maciel E., Dória M.L., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Helguero L., Domingues P., Domingues M.R.M., Almeida A. (2014) Photodynamic oxidation of bacterial membrane phospholipids: a new insight provided by lipidomics. (see details)
    Link: http://uaonline.ua.pt/pub/detail.asp?c=38266&lg=en
  2. Martins C., Almeida A., Brandão T., Rocha S. (2014) Insights on the Volatile Beer Profile Through HS-SPME/ GC×GC-ToFMS: Optimization of SPME Procedure Taking Advantage of the GC×GC Structured Separations. OC20. (see details)
  3. Alves E., Neves M.G.P.M.S., Cunha A., Almeida A., Faustino M.A.F. (2014) Porphyrins In the Photodynamic Inactivation of Microorganisms Beyond the Medical Scope . (see details)
    Link: http://www.photobiology.org/UserFiles/File/ASP2014%20FINAL%20Online_Prog...
  4. Almeida A., Alves E., Moreirinha C., Faustino A., Cunha C., Delgadillo I., Neves M.G.P.M.S. (2014) Overall Biochemical Changes in Bacteria Photosensitized with Cationic Porphyrins studied by Infrared Spectroscopy. (see details)
    Link: http://www.icpp-spp.org/general/ICPP-8-program_2014.pdf
  5. Neves M.G.P.M.S., Alves E., Costa L., Rodrigues J.M.M., Carvalho C.M.B., Almeida A., Cunha C., Faustino M.A.F., Tomé J.P.C. (2014) New Photoactive Nanomaterials for Environmental Applications. (see details)
    Link: http://www.icpp-spp.org/general/ICPP-8-program_2014.pdf
  6. Tedim, J., Maia, F., Kuznetsova, A., Silva, A.P., Martins, R., Cunha, A., Almeida, A., Loureiro, S., Freitas, R., Soares, A.M.V., Zheludkevich, M.L., Ferreira, M.G.S. (2014) Use of nanostructured materials in marine corrosion protection: an integrated approach. (see details)
  7. Martins C., Almeida A., Brandão T., Rocha S. (2013) A novel tool to establish volatile molecular biomarkers to evaluate yeasts performance through beer fermentation: S. cerevisiae and S. pastorianus. P045, page 59. (see details)
  8. Coelho F.J.R.C., Rocha R.J.M., Pires A.C.C., Castanheira J.M., Almeida A., Cunha Â., Calado R., Cleary D.F.R., Gomes N.C.M. (2013) Ocean acidification and oil contamination have a synergistic effect on microbial community composition. Abstract Book: 2231. (see details)
  9. Santos L., Batista I., Santos A.L., Coelho F.J.R.C., Gomes, N., Dias, J.M., Cunha, Â., Almeida, A. (2013) Heterotrophic activity in the surface microlayer of an estuarine system (Ria de Aveiro). Abstract Book: 2265. (see details)
  10. Coelho F.J.R.C., Rocha R.J.M., Pires A.C.C., Castanheira J.M., Rocha S.M., Costa R., Almeida A., Cunha A,, Lillebø A.I., Calado R., Cleary D.F.R., Gomes N.C.M. (2013) Synergistic effects of global climate change and oil pollution on estuarine sediment bacterial communities. Abstract Book: 2005. (see details)
  11. Pereira C, Baptista I, Silva AP, Cunha A, Gomes NCM, Romalde JL, Nunes ML, Almeida A (2013) Seasonal variation of bacterial community composition of bivalve molluscs harvesting waters. (see details)
  12. Oliveira V., Gomes N.C.M., Almeida A., Silva A.M.S, Simões M.M.Q., Smalla K., Cunha A. (2013) Characterization of endophytic community structure and functional diversity associated with two salt marshes plants (Halimione portulacoides and Sarcocornia perennis). (see details)
  13. Silva A.P., Oliveira V., Gomes N.C.M., Almeida A., Cunha A. (2013) Effect of culture medium in the production of bacterial rhamnolipids. (see details)
  14. Alves E., Faustino M.A.F., Tomé J.P.C., Neves M.G. P. M. S., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Almeida A. (2013) Nucleic acid changes during photodynamic inactivation of bacteria by cationic porphyrins. (see details)
    Link: http://liege2013.photobiology.eu/programme
  15. Alves E., Melo T., Simões C., Faustino M.A.F., Tomé J.P.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Domingues P., Domingues M.R.M., Almeida A., Neves M.G.P.M.S. (2013) Photodynamic oxidation of Staphylococcus warneri membrane phospholipids: new insights based on lipidomics. (see details)
    Link: http://liege2013.photobiology.eu/programme
  16. Silva YJ, Pereira C, Costa L, Cunha A, Gomes NCM, Almeida A (2013) Influence of organic matter content in the inactivation of the fish pathogenic Aeromonas salmonicida by a new isolated bacteriophage. (see details)
  17. Silva YJ, Costa L, Pereira C, Calado R, Gomes NCM, Cunha A, Almeida A (2013) Application of a rapid method for bacteria detection, in order to evaluate the effect of different environmental variables in the efficiency of phage therapy in fish farms. (see details)
  18. Baptista I., Cunha A., Saraiva J., Rocha S.M., Almeida A. (2013) High Pressure Processing in the Inactivation of Enterotoxic Bacterial Strains. (see details)
  19. Baptista I., Salvador A., Petronilho S., Stein P., Ferreira J., Costa V., Gomes N., Cunha A., Almeida A., Rocha S.R. (2013) Food Flow Extract - Flow Extraction of Microbiological Contaminants. (see details)
  20. Santos L, Vaz L, Gomes NMC, Vaz N, Dias JM, Cunha A, Almeida A (2013) Impact of freshwater inflow on bacterial abundance and activity in the estuarine sytem Ria de Aveiro. (see details)
    Link: http://www.same13.eu/images/dates/same13%20abstract%20book.pdf
  21. Martins C., Almeida A., Brandão T., Rocha S. (2013) A novel tool to establish volatile molecular biomarkers to evaluate yeasts performance through beer fermentation: S. cerevisiae and S. pastorianus. (see details)
  22. Gomes M.C., Silva S. , Faustino M.A.F., Neves M.G.P.M.S. , Almeida A., Cavaleiro J., Tomé J.P.C., CunhaA. (2013) Cationic galactoporphyrin photosensitisers against UV-B resistant bacteria: oxidation of lipids and proteins by 1O2. (see details)
  23. Beirão S., Fernandes S., Tomé J.P.C., Neves M.G.P.M.S., Almeida A., Cunha A., Faustino A. (2013) Photodynamic inactivation of bacterial and yeast biofilms with a cationic porphyrin. (see details)
  24. Coelho F.J.R.C., Rocha R.J.M., Pires A.C.C., Castanheira J.M., Rocha S.M., Costa R., Almeida A., Cunha A., Lillebo A.I., Calado R., Cleary D.R.F., Gomes N.C.M. (2013) Synergistic impact of global climate change and oil pollution on estuarine sediment communities simulated in laboratory microcosms. (see details)
  25. Moreirinha C., Saraiva J., Almeida A. , Delgadillo I. (2013) Monitoring microbial changes in fish after HPP by infrared spectroscopy. (see details)
  26. Almeida A., Mateus L., Silva Y., Costa L., Pereira P. , Cunha A. (2013) Efficacy of a phage cocktail against Vibrio parahemolyticus infection in aquaculture. (see details)
  27. Almeida A. (2013) Phage therapy as na alternative against bacterial infection in aquaculture. (see details)
  28. Oliveira V., Gomes N.C.M., Almeida A., Ezequiel J., Serôdio J., Silva A.M.S. , Simões M.M.Q. , Silva H., Cunha A. (2013) Evaluation of plant-microbe interaction in 2-methylnaphthalene contaminated sediments. (see details)
  29. Silva A.P., Oliveira V., Sousa F., Gomes N.C.M., Almeida A., Serafim L., Cunha A. (2013) Effect of salinity in the production of rhamnolipids by Pseudomonas strains isolated from Ria de Aveiro. (see details)
  30. Carla Pereira, Yolanda J. Silva, Liliana Costa, Frederico Azevedo, Ângela Cunha, Adelaide Almeida (2013) Bacteriophages with potential to treat furunculosis in marine fish: survival, host specificity and host phage dynamics. (see details)
  31. Carla Pereira, Yolanda J. Silva, Ângela Cunha, Jesus L. Romalde, Maria L. Nunes, Adelaide Almeida (2013) SEASONAL VARIATION OF SANITARY QUALITY OF BIVALVE HARVESTING WATERS: PRELIMINARY STUDY BEFORE APPLYING PHAGE THERAPY. (see details)
  32. Lília Mateus, Carla Pereira, Yolanda J. Silva, Liliana Costa, Ângela Cunha, Adelaide Almeida (2013) INACTIVATION OF AQUACULTURE VIBRIO PARAHEMOLYTICUS BY THE USE OF PHAGE COCKTAILS. (see details)
  33. Inês Baptista, Ana Luísa Santos, Carla Pereira, Newton C.M.Gomes, Ângela Cunha, Adelaide Almeida (2013) CAN INCUBATION CONDITIONS AFFECT BACTERIOPLANKTON BIOMASS PRODUCTIVITY ESTIMATES. (see details)
  34. Inês Baptista, Rui Queirós, Ângela Cunha, Jorge Saraiva, Sílvia M. Rocha, Adelaide Almeida (2013) HIGH PRESSURE PROCESSING IN THE INACTIVATION OF ENTEROTOXIC STAPHYLOCOCCUS AUREUS. (see details)
  35. Santos L., Vaz L., Gomes N.C.M., Vaz N., Dias J.M., Cunha A., Almeida A. (2013) Impact Freshwater Inflow on Bacterial Abundance and Activity in the Estuarine System Ria de Aveiro. (see details)
  36. Pinto A.G.M., Cunha A., Gomes NMC, Santos E.B.H., Almeida A. (2013) Effect of solar irradiation on heterotrophic bacteria in the marine environment. (see details)
    Link: http://www.same13.eu/images/dates/same13%20abstract%20book.pdf
  37. Santos L., Gomes N.G.M., Santos E.B.H. , Dias J.M., Cunha A., Almeida A. (2013) Photochemical and microbial alterations of DOM spectroscopic properties in the estuarine system Ria de Aveiro. (see details)
  38. Almeida A., Pereira M., Amparo F., Tomé J., Neves G., Tomé A., Cavaleiro J., Cunha Â. (2013) Influence of external bacterial structures in the efficiency of photodynamic inactivation. (see details)
  39. Coelho F.J.R.C., Rocha R. J.M., Pires A.C.C., Castanheira J., Costa R., Lillebø A.I., Almeida A., Cunha Â., Calado R., Cleary D., Gomes N.C.M. (2012) Marine experimental life support system for microbial communities. (see details)
  40. Silva Y.J., Carla Pereira, Ângela Cunha, Newton C.M. Gomes, Adelaide Almeida (2012) Evaluating seasonal dynamics of bacterial communities in a marine fish aquaculture: a preliminary study before applying phage therapy. (see details)
  41. Costa L., Tomé J., Neves M.G., Tomé A. C., Cavaleiro J.A.S., Cunha A., Faustino M.A.F., Almeida A. (2012) Susceptibility of non-enveloped DNA- and RNA–type viruses to photodynamic inactivation. (see details)
    Link: Caderno de resumos, p.573
  42. Almeida A., Abreu A. , Sereno R. (2012) Reducing the Salmonella horizontal transmission during eggs incubation by phage therapy. (see details)
  43. Almeida J,, Tomé J, , Tomé A, , Neves G, , Cavaleiro J, , Cunha A, , Faustino A, Costa L., Almeida J (2012) Photoinactivation of multidrug-resistant bacteria in hospital wastewaters: influence of antibiotics in its effectiveness. (see details)
  44. Almeida A. (2012) Photodynamic inactivation of microorganisms: an efficient and environmentally friendly tecnology. Advanced course on antibiotic resistance in the environment. (see details)
  45. Silva Y.J., Manco S., Costa R., Rodrigues V., Ferreira H., Pousão-Ferreira P., Almeida M.A., Cunha A., Calado R., Gomes N.C.M., Dias J. (2012) Effect of different culture conditions on the structural diversity of prokaryote communities in the sediment of earth ponds stocked with gilthead seabream Sparus aurata. (see details)
  46. Silva Y.J., Calado R., Gomes N.C.M., Cunha A., Almeida M.A. (2012) Application of a rapid method for bacteria detection, in order to evaluate the effect of different cultural conditions on the efficacy of phage therapy as an alternative to inactivate pathogenic bacteria in fish farms. (see details)
  47. Cunha, A., Almeida, A., Nunes da Silva, R., Tomé, J.P.C, Neves, M.G.PM.S., Faustino, M.A.F., Cavaleiro, J.A.S., Oliveira, A., Tomé, A.C. (2012) Photoinactivation of Bacillus endospores: inactivation efficiency varies significantly among species. (see details)
  48. Amador C.D., Cardote T.A., Barata J.F., Faustino M.A.F., M. Graça Neves, Cavaleiro J.A., Alves E., Cunha Â., Almeida A. (2012) Corroles with potential antibacterial acivity: synthesis and biological evaluation of 2-mercaptopyridine derivatives. (see details)
    Link: http://www.spq.pt/eventos/6SPJOCS/abstracts.pdf
  49. Almeida A, Pereira C, Silva YJ, Cunha A, Gomes NCM (2012) Preliminary studies of the applicability of phage therapy with new isolated bacteriophages in marine fish aquaculture. (see details)
  50. Cruz A., Henriques I., Sousa A., Baptista I., Anselmo A. M., Almeida A., Takahashi S., Tanabe S., Correia A., Suzuki S., Mendo S. (2012) Bioremediation of tributyltin (TBT) by Aeromonas molluscorum Av27. (see details)
  51. Coelho F.J.R.C., Santos A.L., Oliveira V., Santos L., Gomes N.C.M., Almeida A., Cunha A. (2011) Padrões de Variação da Actividade Enzimática Extracelular Bacteriana na Ria De Aveiro. (see details)
  52. Alves E., Arrojado C., Pereira C., Carvalho C., Faustino M., Tomé J., Neves M., Tomé A., Cavaleiro J., Cunha A., Gomes N., Almeida A. (2011) Terapia fotodinâmica antimicrobiana como alternativa aos antibióticos para inactivar bactérias patogénicas em pisciculturas. (see details)
    Link: http://la.cesam.ua.pt/encontros_cientificos/2011/LivroResumosJornadasRia...
  53. Domingues P.M., Louvado A., Coelho F.J.R.C., Santos A.L., Gomes N.C.M., Almeida A., Cunha A. (2011) Isolamento e Caracterização de Bactérias Hidrocarbonoclásticas Produtoras de Biossurfactantes da Ria de Aveiro. (see details)
  54. Almeida A., Cunha A. , Gomes N.C.M., Santos L., Mendes C., Pereira C. (2011) Impacto do Virioplâncton sobre a Comunidade Bacteriana da Ria de Aveiro. (see details)
  55. Santos L., Gomes N C M., Cunha A., Almeida A. (2011) Variação da abundância e produtividade bacteriana na Ria de Aveiro durante um período de 10 anos (1996-2007). (see details)
  56. Santos L., Santos A. L., Coelho F., Gomes N. C. M., Cunha A., Dias J. M. , Almeida A. (2011) Avaliação da hidrodinâmica estuarina na actividade bacteriana na microcamada superficial. (see details)
  57. Pereira C., Silva Y. J., Cunha A., Gomes N.C.M., Almeida A. (2011) Terapia Fágica como Alternativa de Baixo Impacto Ambiental para Inactivar Bactérias Patogénicas em Pisciculturas. (see details)
    Link: http://2workshopbiotecnologiaua.weebly.com/posters.html
  58. Gomes M.C., Carvalho E.F.A., Carvalho C.M.B., Alves E., Faustino M.A.F., Neves M.G.P.M.S. , Tomé A.C., Cavaleiro J.A.S., Almeida M.A., Cunha M.A., Lin Z., Rocha J., Tomé J.P.C. (2011) Porphyrins and phthalocyanines for wastewater treatment. (see details)
    Link: http://www.esoc2011.com/default.aspx
  59. Santos L. M. P., Santos A. L., Coelho F., Gomes N., Cunha A., Almeida A. (2011) Different strategies of organic matter decomposition and utilization by bacterioneuston and bacterioplankton in an estuarine system. (see details)
  60. Oliveira V., Santos A.L., Aguiar C., Gomes N.C.M., Almeida A., Rocha S., Cunha A. (2011) Bacteria in salt-marsh sediments of Ria de Aveiro: influence of halophyte root exudates on abundance and diversity. (see details)
  61. Alves E., Costa L., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F. , Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Almeida A., Cunha Â., Lin Z. (2011) Photodynamic inactivation of bacteria and bacteriophages with new cationic nanomagnet-porphyrin hybrids. (see details)
    Link: http://www.esp-photobiology.it/2011congress/index.html
  62. Pereira C., Silva Y.J., Cunha A., Gomes N.C.M., Almeida A. (2011) Bacteriophages with potential for inactivation of fish pathogenic bacteria : survival and effect on bacterial community structure . (see details)
  63. Almeida A., Almeida A, Costa L, Costa L., Alves E, Alves E., Cunha A, Cunha Â., Newton G, Newton G., Carvalho C, Carvalho C., Tomé J P C, Tomé J., Tomé A., Tomé A C, , Faustino A., Faustino M A F , Neves G., Neves M G P S, Cavaleiro J., Cavaleiro J A S (2011) Photodynamic inactivation of pathogenic microorganisms by tetrapyrrolic photosensitizers. (see details)
    Link: hhttp://microbiotec11.org/program/
  64. Almeida A, Pereira C, Tomé J P C, Tomé A C, Cavaleiro J A S, Cunha A, Newton G (2011) Applicability of photodynamic antimicrobial chemotherapy as an alternative to inactivate fish pathogenic bacteria in aquaculture systems. (see details)
  65. Almeida A, Costa L, Alves E, Cunha A, Newton G, Carvalho C, Tomé J P C, Tomé A C, Faustino M A F , Neves M G P S, Cavaleiro J A S (2011) Photodynamic inactivation of pathogenic microorganisms by tetrapyrrolic photosensitizers. (see details)
  66. Santos L., Santos A.L., Coelho F., Gomes N.C.M., Cunha A., Dias J.M., Almeida A. (2011) Avaliação da hidrodinâmica estuarina na actividade bacteriana na microcamada superficial. (see details)
  67. Santos, A.L., Oliveira, V., Baptista, I., Moreirinha, C., Henriques, I., Gomes, N.C.M., Almeida, A., Delgadillo, I., Correia, A., Cunha, A. (2011) Wavelength dependence of the molecular targets involved in UV-induced damage to aquatic bacteria. (see details)
    Link: http://www.io-warnemuende.de/tl_files/conference/same12/pdfs/same12.pdf
  68. Costa L , Carvalho CMB, Faustino MAF, Tomé JPC, Neves GPMS, Tomé AC, Cavaleiro JAS, Cunha A, Gomes NCM, Almeida A (2011) Behaviour of a non-enveloped virus after ten repeated cycles of aPDT. (see details)
  69. Silva Y., Calado R., Gomes N.C.M., Cunha A., Almeida A. (2011) Application of a rapid method for bacteria detection, in order to evaluate the efficiency of phage therapy as an alternative to inactivate pathogenic bacteria in fish farms. (see details)
  70. Silva Y.J., Calado R.J., Gomes N.C.M., Cunha A., Almeida A. (2011) Aplicação de um método rápido de detecção bacteriana para avaliar a eficácia da terapia fágica como alternativa para inactivar bactérias patogénicas em pisciculturas. (see details)
  71. Vieira A., Silva Y.J., Cunha A., Gomes N.C.M., Almeida A. (2011) Topical application of phage therapy to inactivate multidrug-resistant strain of Pseudomonas aeruginosa in skin infections. (see details)
  72. Oliveira C.S, Lázaro B., Henriques, I., Almeida A., Correia, A. (2011) Epsilon and beta incP-1 plasmids are present in estuarine aquatic environments, a new source of BHR plasmids. (see details)
  73. Pereira C., Silva Y. J., Cunha A., Gomes N.C.M., Almeida A. (2011) Terapia Fágica como Alternativa de Baixo Impacto Ambiental para Inactivar Bactérias Patogénicas em Pisciculturas. (see details)
  74. Alves E., Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Almeida A. (2010) Antimicrobial photodynamic therapy in aquaculture: effect of physical and chemical properties of water on the photoinactivation of Vibrio fischeri. (see details)
    Link: http://www.esp-photobiology.it/school.html
  75. Faustino M.A.F., Tavares A., Carvalho C.M.B., Neves M.G.P.M.S., Tomé J.P.C., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Alves E., Almeida A. (2010) Potential development of bacterial resistance and bacterial viability recovery after photodynamic therapy. (see details)
    Link: http://www.icpp-spp.org/index.php
  76. Tomé J.P.C., Almeida M.A., Alves E., Carvalho C.M.B., Cavaleiro J.A.S., Costa L., Cunha M.A., Faustino M.A.F., Lin Z., Neves M.G.P.M.S., Rocha J., Tomé A.C. (2010) Nanomagnet-Porphyrin Hybrids for Microorganisms Photoinactivation. (see details)
    Link: http://www.icpp-spp.org/index.php
  77. Oliveira C.S, Almeida A., Correia A. (2010) Does the surface microlayer environment select for specific microbial communities? Investigating the role of horizontal gene transfer. (see details)
  78. Gomes C.F.A.C., Faustino M.A.F., Neves M.G.P.M.S., Cavaleiro J.A.S., Almeida A., Cunha A., Tomé J.P.C. (2010) Cationic Galactoporphyrins on Microorganism Photoinactivation. (see details)
  79. Pereira J.B., Alves E.F.A., Faustino M.A.F., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A, Almeida A., Tomé J.P.C. (2010) Cationic Phthalocyanines as Antimicrobial Agents. (see details)
  80. Gomes C., Gomes C., Neves M.G., Neves M.G., Cavaleiro J., Cavaleiro J., Almeida A., Almeida A., Cunha A., Cunha A., Tomé J. (2010) New cationic glycoporphyrin for the photoinactivation of microorganisms. (see details)
  81. Pereira J., Carvalho C., Alves E., Neves G., Cavaleiro J., Almeida A., Cunha A., Tomé J., , , , , (2010) Multi-charge phthalocyanines for microorganisms photoinactivation. (see details)
  82. Cunha A., Almeida M.A., Coelho F., Framegas D., Gomes N.C.M., Louvado A. (2010) Surfactant-resistant bacteria from the marine surface microlayer. (see details)
  83. Salvador A., Baptista I., Barros A., Cunha A., Almeida A., Rocha S.M. (2010) HS-SPME combined with GC × GC-ToFMS: a powerful toll for assesssing microbial contamination of cereals and coffee beans. (see details)
  84. Costa L, Carvalho CMB, Faustino MAF, Tomé JPC, Neves GPMS, Tomé AC, Cavaleiro JAS, Cunha A, Gomes NCM, Almeida A (2010) Study of viral resistance following repeated exposure to aPDT and recovery of viability. (see details)
  85. Alves E., Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Almeida A. (2010) Antimicrobial photodynamic therapy in aquaculture: effect of temperature, pH, salinity, oxygen and organic matter on the photoinactivation of Vibrio fischeri. (see details)
  86. Alves C., Pio C., Gonçalves C., Mirante F., Evtyugina M., Caseiro A., Puxbaum H. (2009) Emissions of trace gases and aerosols from prescribed fires in Portugal. (see details)
  87. Oliveira C.S, Bresciani V., Almeida A., Correia A. (2009) Conjugative gene transfer and BHR plasmids incidence from the SML and subsurface waters: an estuary from Portugal as a case study. (see details)
  88. Coelho F., Sousa S., Santos A.L., Oliveira V., Gomes N.C.M., Almeida A., Cunha A. (2009) PAH degrading bacterial community from the Sea Surface Microlayer in an estuarine system. (see details)
  89. Coelho F., Sousa S., Santos L., Santos A. L., Almeida A., Cunha A. (2009) Bacterioneuston of Ria de Aveiro: abundance, heterotrophic activity and degradation of PAH. (see details)
  90. Coelho F., Moreira A., Simões C., Gomes F., Sousa S., Ramos A., Louvado A., Santos A. L., Gomes N.C.M., Almeida A., Cunha A. (2009) Microbiologia Ambiental: potencial biotecnológico da Ria de Aveiro. (see details)
  91. Coelho F., Sousa S., Santos A. L., Gomes N.C.M., Almeida A., Cunha A. (2009) PAH degrading bacterial community in an estuarine system. Biological Responses to Chemical Contaminants: from molecular to community level. (see details)
  92. Prata C. , Ribeiro A. , Cunha A. , Gomes N. C. M. , Almeida A. (2009) Marine surface microlayer as a source of viruses. (see details)
  93. Tavares A., Dias S.R.S., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Alves E., Almeida A. (2009) Photoinactivation mechanism of Gram negative recombinant bioluminescent bacteria by cationic porphyrins. (see details)
    Link: http://www.esp-photobiology.it/2009congress/
  94. Costa D.C.S. , Alves D.A., Carvalho C.M.B., Tomé J.P.C., Tomé A.C., Neves M.G.P.M.S., Faustino M.A.F., Cavaleiro J.A.S., Alves E., Tavares A., Cunha Â., Almeida A. (2009) Synthesis and biological evaluation of new water-soluble porphyrins. (see details)
  95. Teixeira D.F.R., Neves M.G.P.M.S., Marques M.G.S., Ramos C.I.V., Tomé J.P.C., Tomé A.C., Alves E., Tavares A., Almeida A., Cunha Â., Faustino M.A.F., Cavaleiro J.A.S. (2009) New photosensitizing materials based on immobilized chlorin on silica. (see details)
  96. Tavares A., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Alves E., Costa L., Almeida A. (2009) Study of the photodynamic inactivation mechanism of a recombinant bioluminescent Escherichia coli. (see details)
    Link: http://www.iuf.uni-duesseldorf.de/ICP2009/
  97. Tavares A., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J., Carvalho C., Cunha A., Gomes N., Alves E., Almeida A. (2009) Study of the photoinactivation mechanisms of a recombinant bioluminescent Escherichia coli. (see details)
    Link: http://capgb.web.ua.pt/34F2021C-F81D-4075-9C28-F9AB932760D9_files/Progra...
  98. Mendes C., Santos A.L., Gomes N.C.M., Cunha A., Almeida A (2009) ROLE OF LYSOGENY AT THE AIR-WATER INTERFACE. (see details)
  99. Pereira C, Santos A L, Arrojado C, Santos M, Cunha A, Gomes NCM, Almeida A (2009) Phage effects on the structural bacterial diversity in aquaculture water. (see details)
  100. Arrojado C., Santos A. L., Pereira C., Carvalho C.M.B, Tomé J.P.C, Faustino M.A.F, Neves M.G.P.M.S, Tomé A.C, Cavaleiro J.A.S, Cunha A., Gomes N.C.M, Almeida A. (2009) Inactivation of pathogenic bacteria of aquaculture systems by porphyrin derivatives. (see details)
  101. Arrojado C., Santos A. L., Pereira C., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S, Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M, Almeida A. (2009) Inactivation of pathogenic bacteria of aquaculture systems by porphyrin derivatives. (see details)
  102. Arrojado C., Santos A. L., Pereira C., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Almeida A. (2009) Inactivation of pathogenic bacteria of aquaculture systems by porphyrin derivatives. (see details)
  103. Oliveira V., Santos A.L., Coelho F., Aguiar C., Sousa S., Lopes S., Gomes N.C.M, Almeida A., Cunha A. (2009) Bacterial in salt-marsh sediments: Influence of plant colonization on abundance, Physiological diversity and heterotrophic activity (Ria de Aveiro, Portugal). (see details)
  104. Oliveira V., Santos A.L., Coelho F., Aguiar C., Gomes N.C.M., Almeida A., Cunha A. (2009) Structural diversity, physiological profiles and abundance of sulfate-reducing bacteria in bacterial communities of salt-marsh sediments (Ria de Aveiro, Portugal). (see details)
  105. Oliveira V., Aguiar C., Gomes N.C.M., Almeida A., Cunha A. (2009) Património Microbiológico do Sapal da Ria de Aveiro: importância das bactérias para a reciclagem de matéria orgânica. Congresso Internacional de História e Património de Aveiro. (see details)
  106. Silva R.N., Tómas A.C., Tómas J.P.C., Neves M.G.P.M.S., Faustino M.A.F., Cavaleiro J.A.S., Oliveira V., Almeida A., Cunha A. (2009) Evaluation of the adsorvation/activity relationship of a cationic porphyrin in Bacillus endospores. (see details)
  107. Santos A.L., Baptista I., Oliveira V., Lopes S., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2009) Role of Photochemically-Induced Oxidative Stress in Determining the Biological Effects of UV Radiation in Bacteria. (see details)
  108. Pereira C., Santos A. L., Arrojado C., Cunha A., Gomes N.C.M., Almeida A. (2009) Bacterial diversity of aquaculture systems on the Ria de Aveiro. (see details)
  109. Pereira C., Santos A. L., Arrojado C., Cunha A., Gomes N.C.M., Newton N.C.M., Almeida A. (2009) Bacterial diversity of aquaculture systems on the Ria de Aveiro estuarine. (see details)
  110. Santos A.L., Lopes S., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2009) Resistance to DNA-Damage and UV-Induced Oxidative Stress in Estuarine Bacterioneuston. (see details)
  111. Louvado A., Santos A.L., Coelho F., Sousa S., Moreira A., Gomes F., Almeida A., Gomes N.C.M., Cunha A. (2009) Isolation of Surfactant-Resistant Bacteria from the Surface Microlayer. (see details)
  112. Louvado A., Santos A.L., Coelho F., Sousa S., Moreira A., Gomes F., Almeida A., Gomes N.C.M., Cunha A. (2009) Biotechnological Potential of Surfactant Resistant Bacteria from the Surface Microlayer. (see details)
  113. Pereira C., Santos A. L., Arrojado C., Cunha A., Gomes N.C.M., Almeida A. (2009) Bacterial diversity of aquaculture systems on the Ria de Aveiro estuarine. (see details)
  114. Santos A.L., Lopes S., Alves E., Gomes N.C.M., Correia A., Almeida A., Cunha A. (2009) Involvement of reactive oxygen species in UVR-induced damage of estuarine bacterioneuston isolates. (see details)
    Link: http://www.esp-photobiology.it/2009congress/
  115. Santos A.L., Baptista I., Henriques I., Correia A., Almeida A., Cunha A. (2009) Effects of Ultraviolet Radiation on the Activity, Structure and Diversity of Estuarine Bacterioneuston. (see details)
  116. Almeida, A., Baptista, I. (2009) Leucine incorporation method for estimating bacterial biomass production: opening the black box. (see details)
  117. Santos, A.L., Santos, A.L., Baptista, I., Baptista, I., Lopes, S., Lopes, S., Gomes, N.C.M., Henriques, I., Gomes, N.C.M., Henriques, I., Correia, A., Almeida, A., Almeida, A., Correia, A., Cunha, A., Cunha, A. (2009) Biological and physiological responses of bacterioneuston and bacterioplankton to experimental UV-B exposure. (see details)
  118. Faustino M.A.F., Alves E., Carvalho C.M.B., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Almeida A. (2009) Photoinactivation of recombinant bioluminescent E. coli by cationic porphyrins under solar and artificial irradiation. (see details)
    Link: http://www.esp-photobiology.it/2009congress/
  119. Santos A.L., Lopes S., João C., Henriques I., Gomes N.C.M., Correia A., Almeida A., Cunha A. (2009) UV Radiation induced inactivation and recovery potential in bacterioneuston isolates. (see details)
  120. Santos A.L., Coelho F., Santos L., Mendes C., Louvado A., Sousa S., Lopes S., Moreira A., Gomes F., Henriques I., Almeida A., Correia A., Gomes N.C.M., Cunha A. (2009) Characterization and Biotechnological Potential of Bacterioneuston. (see details)
  121. Santos A.L., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2009) Impact of UV-B radiation on estuarine and freshwater microbial communities. (see details)
  122. Pires, A.C.C., Santos, A.L., Becking, L.E., Voogd, N.J., Almeida, A., Cunha, A., Calado, R., Cleary, D.F.R., Gomes, N.C.M (2009) Freeze-thaw pre-lysis may not improve microbial DNA extraction from sponges. (see details)
  123. Nogueira, V.I.J.O., Pereira, R., Lopes, I., Gonçalves, F., Soares, A.M.V.M., Almeida, A., Gomes, N.C. (2009) The impact of organic and inorganic nanomaterials in the soil microbial community structure. (see details)
  124. Gomes, N.C.M., Cleary, D.F.R., Pinto, F.N. , Egas, C., Almeida, A., Cunha, A., Mendonça-Hagler, L.C.S., Smalla, K. (2009) Rhizosphere Microbial Communities in Polluted Urban Mangroves: insights gained by massively parallel pyrosequencing. (see details)
  125. Costa L. , Lopes J., Cunha A., Gomes N., Carvalho C.M.B., Faustino M.A.F., Neves M.G.P.S, Tomé J.P.C., Tomé A.C., Cavaleiro J.A.S, Almeida A. (2009) Importance of type I and type II pathways on sewage bacteriophage photoinactivation. (see details)
  126. Costa L. , Cunha A., Gomes N.C.M., Carvalho C.M.B., Faustino M.A.F., Neves M.G.P.M.S., Tomé J.P.C., Tomé A.C., Cavaleiro J.A.S, Almeida A. (2009) Involvement of type I and type II mechanisms on MS2 sewage bacteriophage photoinactivation. (see details)
  127. Costa L. , Cunha A., Gomes N.C.M., Carvalho C.M.B., Faustino M.A.F., Neves M.G.P.M.S., Tomé J.P.C., Tomé A.C., Cavaleiro J.A.S, Almeida A. (2009) Effect of different sources and light intensities on T4-like sewage bacteriophage photoinactivation. (see details)
  128. Oliveira, J., Gomes, N. C. M., Cunha, A., Almeida, A., Castilho, F., Pereira, M. J. (2009) Bacterial DNA extraction from the blue mussel Mytilus edulis and their surrounding environment – methodology comparison. (see details)
  129. Oliveira, J., Cunha, A., Almeida, A., Gomes, N. C. M., Castilho, F., Romalde, J. L., Pereira, M. J. (2009) Assessment of the Microbial Contamination in Bivalves - Future Perspectives. (see details)
  130. Oliveira, J., Gomes, N. C. M., Cunha, A., Almeida, A., Castilho, F., Pereira, M. J. (2009) Assessing Microbiological Contamination of Bivalves - Emerging Perspectives. (see details)
  131. Oliveira, J., Gomes, N. C. M., Cunha, A., Almeida, A., Castilho, F., Pereira, M. J. (2009) Bacterial DNA extraction from the blue mussel Mytilus edulis and their surrounding environment – methodology comparison. (see details)
  132. Coelho F. L. , Santos L, Santos A. L. , Almeida A., Cunha A. (2008) Comparative analysis of bacterioneuston and bacterioplankton along a gradient of contamination with polycyclic aromatic hydrocarbon. (see details)
  133. Santos A.L., Henriques I., Correia A., Almeida A., Cunha A. (2008) Effects of Ultraviolet Radiation on Estuarine Bacterioneuston and Bacterioplankton (Ria de Aveiro, Portugal). (see details)
  134. Santos A.L., Santos L., Henriques I., Correia A., Almeida A., Cunha A. (2008) Alretações globais e ecossistemas estuarinos: Impacto da radiação ultravioleta nas comunidades bacterianas da Ria de Aveiro. (see details)
  135. Coelho F., Santos L., Santos A.L., Almeida A., Cunha A. (2008) Microrganismos nas águas da Ria de Aveiro: Comparação entre bacterioneuston e bacterioplâncton ao longo de um gradiente de contaminação. (see details)
  136. Silva Y., Salvador S. , Cunha A,., Almeida A . (2008) Avaliação da qualidade microbiológica em aquaculturas localizadas na Ria de Aveiro. (see details)
  137. Coelho F., Santos L., Santos A. L., Almeida A., Cunha A. (2008) Comparative analysis of bacterioneuston and bacterioplankton along a gradient of contamination with polycyclic aromatic hydrocarbon. (see details)
  138. Almeida MA, Baptista I, Cunha MA, Carvalho CMB, Gomes ATPC, Faustino MAF, Tomé JPC, Neves MGPMS, Tomé AC, Zhi Lin, Rainho JP, Rocha J, Cavaleiro JAS (2007) Photoinactivation of sewage bacteriophages using cationic porphyrins. (see details)
  139. Santos L, Cunha MA, Gomes A, Santos AL, Hornibrook E, Pinheiro LM, Nuzzo M, Oliveira V, Almeida MA (2007) Distribution and activity of prokaryote communities in the sediments of the mud volcano Porto (Gulf of Cadiz). (see details)
  140. Santos L, Almeida MA, Niemann H, Boetius A, Boetius A, Cunha MA, Pinheiro LM, Niemann H, Cunha MA, Almeida MA, Magalhães V, Pinheiro LM (2007) Microbial communities involved in anaerobic methane oxidation in mud volcanoes from the Gulf of Cadiz. (see details)
  141. L. Santos, F. Coelho, C. Mendes, L. Nance, E. Santos, A. Cunha, A. Almeida (2007) Does photochemical alteration of dissolved organic matter influence the structure and activity of the estuarine prokaryote communities?. (see details)
  142. Oliveira V, Santos AL, Mendes C, Santos L, Almeida A, Cunha A (2007) Influence of plant colonization on te size, physological diversity and heterotrophic activityof salt marsh bacteriobenthos (Ria de Aveiro, Portugal). (see details)
  143. Santos AL, Mendes C, Coelho F, Oliveira V, Santos L, Almeida A, Cunha A (2007) Dynamics of bacterioneuston and bacterioplankton communities in the estuarine system Ria de Aveiro, Portugal. (see details)
  144. Bessa V, Lopes AR, Santos L, Pereira MJ, Almeida A, Cunha A (2007) Bacterioplankton dynamics during the development of cyanobacteria bloom in a Portuguese freshwater shallow lake (Lagoa da Vela). (see details)
  145. Almeida A , Cunha A, Gomes A, Santos L, Trigo C (2007) Viruses and pathogenic bacteria f fish in two aquaculture systems of the estuarine system Ria de Aveiro. (see details)
  146. Almeida A (2007) Padrões de variação da abundância de vírus no sistema estuarino da Ria de Aveiro. (see details)
  147. Almeida A, Costa L, Cunha A, Carvalho C, Tomé J, Faustino M A, Neves M. G, Tomé A, Cavaleiro J (2007) Effects of light intensity and porhyrin concentration on sewage bacteriophage inactivation. (see details)
  148. Oliveira A, Cunha A, Almeida A, Carvalho C, Tomé J, Faustino MAF, Neves MG , Tomé AC , Cavaleiro J (2007) Porphyrin derivatives as photosensitizes for the inactivation of bacterial endospores. (see details)
  149. Almeida A, Almeida A., Cunha A, Cunha A., Santos L, Santos L., Salvador S, Salvador S., Gomes A, Gomes A. (2007) Evaluation of the impact of two aquaculture systems on bacterial communities of the estuarine system Ria de Aveiro. (see details)
  150. Alves E., Carvalho C., Tomé J., Faustino A., Neves G., Tomé A., Cavaleiro J., Cunha A., Almeida A. (2007) Recombinant bioluminescent Escherichia coli: photodynamic inactivation by cationic porphyrin derivatives under artificial and solar light irradiation. (see details)
    Link: http://www.formatex.org/biomicroworld2007/acceptedabstracts.php
  151. Costa L, Carvalho C, Tomé J, Faustino A, Neves G, Tomé A, Cavaleiro J, Zhi Lin, Rainho J, Rocha J, Cunha A, Almeida A (2007) Sewage bacteriophage photoinactivation by porphyrins immobilized in solid matrixes. (see details)
  152. Santos L, Coelho F, Mendes C, Loureiro N, Santos E, Cunha A, Almeida A (2007) Relationship between the dissolved organic matter photochemical transformation and the activity of estuarine microbial communities. (see details)
  153. Carvalho, C. M. B., , Faustino, M. A. F., , Tomé, J. P. C., , Neves, M. G. P. M. S., , Tomé, A. C., , Lin, Z., , Rainho, J. P., , Almeida, M. A., , Cunha, M. A., , Rocha, J., , Cavaleiro J. (2007) Immobilized porphyrins: synthesis and antiviral evaluation. 1. (see details)
  154. Almeida A., Salvador S., Loureiro C., Cunha A., Lopes A.R., Bessa V.S., Pereira M.J. (2007) Variation of viruses-to-bacterium ratio during a phytoplankton bloom in a shallow freshwater lake. (see details)
  155. Alves E., Almeida A., Cunha A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J., Lin Z., Rainho J., Rocha J. (2007) Antibacterial activity of cationic porphyrin derivatives against enteric bactéria. (see details)
    Link: http://capgb.web.ua.pt/34F2021C-F81D-4075-9C28-F9AB932760D9_files/Resumo...
  156. Costa L., Costa L. , Almeida A., Almeida A., Cunha A., Cunha A., Carvalho C., Tomé J., Faustino M.A., Tomé J., Neves M.G., Faustino M.A.F., Neves M.G., Tomé A., Cavaleiro J., Tomé A., Cavaleiro J. (2007) Photoinactivation of sewage bacteriophages with cationic porphyrins. (see details)
  157. Oliveirra A., Cunha A., Carvalho C., Tomé J., Faustino M.A.F. , Neves M.G., Tomé A.C., Cavaleiro J. (2007) Porphyrin derivatives as photosensitizes for the inactivation of bacterial endospores. (see details)
  158. Santos L., Coelho F., Loureiro N., Santos E., Cunha A., Almeida A. (2007) Effect of photochemical organic matter degradation on microbial activity in the estuarine system Ria de Aveiro. (see details)
  159. Almeida A., Costa L., Cunha A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Effects of light intensity and porhyrin concentration on sewage bacteriophage inactivatio. (see details)
  160. Bessa V.S.S., Lopes A.R., Santos L., Almeida A., Cunha A., Pereira M.J. (2007) Bacterioplankton assessing during the course of a cyanobacterial bloom in a PPortuguese freshwater shallow lake (Lagoa da Vela). (see details)
  161. Gomes A., Santos L., Cunha A., Almeida A. (2007) Prokaryote and viral profiles of abundance in the Semenovich, Porto and Bonjardim mud volcanoes. (see details)
  162. Mendes C., Santos A.L., Santos L., Cunha A,, Almeida A. (2007) Profiles of abundance, viability and productivity of bacterioneuston in the estuarine system Ria de Aveiro. (see details)
  163. Oliveira A., Cunha A., Almeida A., Carvalho C., Faustino M.A.F. , Neves M.G., Tomé A.C., Cavaleiro J. (2007) Porphyrin derivatives as photosensitizers for the inactivation of bacterial endospores. (see details)
  164. Santos A.L., Mendes C., Coelho F., Oliveira V., Santos L., Almeida A., Cunha A. (2007) Seasonal and spatial patterns of bacterioneuston and bacterioplankton communities in the estuarine system Ria de Aveiro, Portugal. (see details)
  165. Almeida A., Cunha A., Gomes A., Santos L., Trigo C (2007) Viruses and pathogenic bactéria of fish in two aquaculture systems of the estuarine system Ria de Aveiro. (see details)
  166. Almeida A., Cunha A., Santos L., Salvador S., Gomes A. (2007) Evaluation of the impact of two aquaculture systems on bacterial communities of the estuarine system Ria de Aveiro. (see details)
  167. Alves E., Almeida A., Cunha A., Carvalho C., Tomé J., Faustino M.A.F., Neves M.G., Tomé A., Cavaleiro J. (2007) Effect of porphyrin charge in the inactivation of enteric bacteria. (see details)
    Link: http://www.fcma.ualg.pt/same10/
  168. Costa L., Almeida A., Cunha A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Effects of cationic porphyrins charge on a sewage bacteriophage inactivation. (see details)
  169. Cunha A., Coelho F., Santos A.L., Oliveira V., Santos L., Almeida A. (2007) Characterization of bacterioplankton and bacterioneuston in the estuarine system Ria de Aveiro, Portugal. (see details)
  170. Santos L., Coelho F., Loureiro N., Santos E., Cunha A., Almeida A. (2007) Does photochemical alteration of dissolved organic matter influence the structure and activity of estuarine prokaryote communities?. (see details)
  171. Fateixa S, Fateixa S, Neves MC, Neves MC, Almeida A, Almeida A, Neto CP, Neto CP, Oliveira J , Oliveira J, Trindade T, Trindade T (2007) In vitro antifungal activity of SiO2/Ag2S nanocomposites against Aspergillus niger. (see details)
  172. Fateixa S, Neves MC, Almeida A, Neto CP, Oliveira J, Trindade T (2007) Antifungal Activity of SiO2/Ag2S Nanocomposites. (see details)
  173. Fateixa S, Neves MC, Almeida A, Neto CP, Oliveira J, Trindade T (2007) In vitro antifungal activity of SiO2/Ag2S nanocomposites against Aspergillus niger. (see details)
  174. Cruz C, Santos AL, Santos L, Cunha A, Almeida A (2007) Profiles of abundance, viability and productivity of bacterioneuston in the estuarine system Ria de Aveiro. (see details)
  175. Alves E., Almeida A., Cunha Â., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Antibacterial activity of cationic porphyrin derivatives against enteric bacteria. (see details)
    Link: http://www.ciimar.up.pt/enpgcb/
  176. Alves E., Almeida A., Cunha Â., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Terapia Fotodinâmica Antimicrobiana. (see details)
  177. Faustino M A, Neves M. G, Tomé A, Cavaleiro J , Almeida A., Cunha A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Photoinactivation of sewage bacteriophages with cationic porphyrins. (see details)
  178. Santos, L.,, Baptista I., Henriques I., Sousa I., Correia A., Cunha A., Almeida A. (2006) Structure of bacterial assemblages down water column of a shallow estuarine system (Ria de Aveiro, Portugal). (see details)
  179. Coelho F., Santos L., Almeida A., Cunha A. (2006) Comparative analysis of bacterioneuston and bacterioplankton in na estuarine system (Ria de Aveiro, Portugal). (see details)
  180. Cunha A., Santos L., Coelho F., Almeida A. (2006) Heterotrophic activity of bacterioneuston and bacterioplankton in an estuarine system (Ria de Aveiro, Portugal). (see details)
  181. Cunha A., LIma E., Matos P., Coelho F., Loureiro N., Almeida A. (2006) Abundance, physiological diversity and activity of salt marsh bacteriobenthos (Ria de Aveiro, Portugal). (see details)
  182. Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Lin Z., Rainho J.P., Almeida M.A., Cunha M.A., Rocha J., Cavaleiro J.A.S. (2006) Synthesis and photochemical properties of immobilized porphyrins. (see details)
  183. Almeida A,, Loureiro N., Baptista I., Cunha A., Coelho F., Santos L. (2006) Relashionship between bacterial membrane integrity and bacterial production in the surface microlayer of the estuarine system Ria de Aveiro. 5º Simpósio sobre a Margem Ibérica Atlântica. (see details)
  184. Almeida A., Salvador S., Cunha A. (2006) Evaluation of bacterial contamination of two aquaculture systems: impact on water quality of the estuarine system Ria de Aveiro. (see details)
  185. Almeida MA.., Cunha MA.. (2006) Vertical Variation of Bacterial Production in Water Column of the Coastal Atlantic Region off Aveiro (NW Portugal). (see details)
  186. Almeida MA, Baptista I, Coelho F, Cunha A, Loureiro.N, Salvador S, Santos, L (2006) Vertical variation of viruses-to-bacterium ratio in a estuarine System (Ria de Aveiro, Portugal). (see details)
  187. Santos L, Almeida MA, Coelho F, Cunha MA, Lima E, Loureiro N, Matos P, Salvador S, Pinheiro LM (2006) Distribution, activity and diversity of microbial communities from sediments of the mud volcano Mercator (Gulf of Cadiz). (see details)
  188. Santos L, Niemann H, Boetius A, Pinheiro LM, Cunha A, Almeida A (2006) Microbial communities involved in anaerobic methane oxidation in mud volcanoes from the Gulf of Cadiz. (see details)
  189. Coelho F., Santos L., Almeida A., Cunha A. (2006) Comparative Analysis of Bacterioneuston and Bacterioplankton in an Estuarine System (Ria De Aveiro, Portugal). (see details)
  190. Cunha A., Almeida A. (2005) Bacterial activity in portuguese coastal waters between an estuarine plume and a sewage outfall. (see details)
  191. Cunha A., Almeida A., Ré A., Martins A., Alcântara F. (2005) Perylene toxicity in the estuarine environment of Ria de Aveiro (Portugal). (see details)
  192. Cunha A., Almeida A. (2005) Relations between nitrogen availability, bacterioplankton ectoenzymatic activity and monomer incorporation in an estuarine system. (see details)
  193. Carvalho C.M.B., Gomes A.T.P.C., Faustino M.A.F., Tomé J.P.C, Neves M.G.P.M.S., Tomé A.C., Lin Z., Fernandes S.C.D., Prata C.C.B., Almeida M.A., Cunha M.A., Rocha J., Cavaleiro J.A.S. (2005) Photoinactivation of sewage bacterial assemblages present in wastewater by neutral and cationic porphyrins. (see details)
  194. Carvalho C.M.B., Gomes A.T.P.C., Faustino M.A.F., Tomé J.P.C, Neves M.G.P.M.S., Tomé A.C., Lin Z., Rainho J.P., Fernandes S.C.D., Prata A.C., Almeida M.A., Cunha M.A., Rocha J., Cavaleiro J.A.S. (2005) Photoinactivation of wastewater microorganisms by neutral porphyrins. (see details)
  195. Almeida M.A., Cunha M.A . (2005) Influence of nitrogen availability on the distribution of bacterial productivity in an estuarine system. (see details)
  196. Baptista I., Santos L., Sousa I., Santos E., Cunha M.A., Almeida M.A. (2005) Factors underlying the shape of vertical profiles of bacterial density, viability and productivity in the ecosystem Ria de Aveiro. (see details)
  197. Almeida M.A., Cunha M.A., Santos L., Baptista I., Malatkova B., Santos E.B.H. (2005) Effect of organic matter composition on bacterial activity distribution down the water column of a shallow estuarine system. (see details)
  198. Almeida MA, Cunha MA, Fernandes S, Sobral P, Alcântara F (2005) Copper effects in bacterial activity of estuarine silty sediments. (see details)
  199. Gomes A, Carvalho C, Faustino MA, Tomé JP, Neves MG, Tomé AC, Zhi Lin, Rainho J, Fernandes S, Prata AC, Almeida MA, Cunha MA, Rocha J, Cavaleiro J (2005) Photoinactivation of wastewater microorganisms by cationic and neutral porphyrins. (see details)
  200. Gomes A, Carvalho C, Faustino MA, Tomé JP, Neves MG, Tomé AC, Zhi Lin, Rainho JP, Fernandes SC, Prata AC, Almeida MA, Cunha MA, Rocha J, Cavaleiro JA (2005) Cationic Porphyrins as Photosensitizers in Cationic Porphyrins as Photosensitizers in Photoinactivation of Sewage Bacterial Assemblages. (see details)
  201. Rainho J.P., Rocha J., Lin Z., Faustino M.A., Cunha M.A., Almeida M.A., Tomé J., Tomé A., Neves G., Cavaleiro J., Carvalho C., Gomes A. (2005) Preparation of new immobilized photosensitizers. (see details)
  202. Sousa I., Baptista I., Santos L., Almeida M.A., Santos E., Cunha M.A. (2005) Effect of solar radiation on DOM quality and on marine bacterioplankton ectoenzymatic activity and monomer uptake. (see details)
  203. Sousa I., Batista I., Santo L., Almeida M.A., Santos E., Cunha M.A. (2005) Effect of solar radiation on DOM quality and on marine bacterioplankton ectoenzymatic activity and monomer uptake. (see details)
  204. Santos L, Cunha MA, Matos J, Pedrosa F, Almeida MA (2005) Impact of salt marsh bacterial communities to the bacterioplankton dynamics of two estuarine systems (Ria de Aveiro and Tagus Estuary). (see details)
  205. Henriques I., Alves A., Tacão M., Cunha A., Almeida A., Correia A. (2005) Genetic diversity and dynamics of free-living bacterial communities along an estuarine gradient (Ria de Aveiro, portugal). (see details)
  206. Cunha M.A., Almeida M.A., Pedrosa F., Matos J., Santos L. (2004) Actividade heterotrófica de comunidades bacterianas de sapais (Ria de Aveiro e estuário do Tejo). (see details)
  207. Pato P., Pinto C., Cunha A., Almeida A., Pereira M.E., Vale C., Duarte A.C . (2004) Tidal variability in the transport of particulate mercury. . (see details)
  208. Santos L, Cunha MA, Matos J, Pedrosa F, Almeida MA (2004) Exportação de carbono bacteriano do sapal para o estuário (Ria de Aveiro). (see details)
  209. Almeida M.A., Cunha M.A., Alcântara F. (2003) Reactivity of estuarine bacterioplankton production to spatial and seasonal changes in the trophic background (Ria de Aveiro, Portugal). II Plankton Symposium, 16-19 October ). (see details)
  210. Almeida M.A., Cunha M.A., Silva H., Caçador I (2003) Influence of the composition of salt marsh vegetation on bacterial activity. (see details)
  211. Pedro P, Tação M, Almeida A, Silva H, Cunha A (2003) Growth efficiency of heterotrophic bacteria in a salt marsh. (see details)
  212. Henriques I., Almeida A., Cunha A., Saavedra M.J., Correia A. (2003) Analysis of the bacterioplankton community in Ria de Aveiro: a molecular approach. (see details)
  213. Henriques I., Saavedra M. J., Almeida A., Cunha A., Correia A. (2003) Phylogenetic analysis of bacterioplankton community in Ria de Aveiro. (see details)
  214. Cunha M.A., Dias J.M., Almeida M.A., Fortes J.F., Alcântara F. (2001) Fluxes of bacterioplankton communuties and associated heterotrophic activities at the estuarine-ocean boundary (Ria de Aveiro, Portugal). (see details)
  215. Cunha M.A., Almeida M.A., Alcântara F. (2001) Ectoenzymatic activity and glucose heterotrophic metabolism in a shallow estuary (Ria de Aveiro, Portugal): influence of bed sediments and salt marshes. (see details)
  216. Almeida MA, Cunha MA, Alcântara F (2001) Bacterioplankton production in a shallow estuarine system (Ria de Aveiro): impact of salt marsh and bed sediments. (see details)
  217. Almeida MA, Cunha MA, Alcântara F (2001) Physiological responses of marine and brackish water bacterial assemblages in a tidal estuary (Ria de Aveiro, Portugal).,. (see details)
  218. Almeida M. A, Cunha M. A. (2000) Bacterioplâncton da Ria de Aveiro: variações tidais e geográficas. (see details)
  219. Almeida M.A., Cunha M.A., Alcântara F. (2000) Bacterioplankton thriving against the seasonal fluctuation of primary production in a shallow estuary. (see details)
  220. Cunha A., Almeida A., Alcântara F. (1998) Processos microbianos de degradação e reciclagem de matéria orgânica na Ria de Aveiro. (see details)
  221. Cunha M.A., Almeida M.A., Alcântara F. (1998) Variação da actividade bacteriana ao longo de um gradiente de salinidade. (see details)
  222. Cunha M.A., Almeida M.A., Alcântara F. (1998) Short term responses of the bacterial communities in the frontier with the sea. (see details)
  223. Cunha M.A., Almeida M.A., Alcântara F. (1998) Compartimentação da actividade respiratória aeróbia em ambientes estuarinos (Ria de Aveiro, Portugal). (see details)
  224. Cunha M.A., Almeida M.A., Alcântara F. (1997) Variação da actividade planctónica com o regime de marés na Ria de Aveiro. (see details)
  225. Alcântara F., Almeida M.A . (1994) Virological quality of the Ria de Aveiro: validity of potential microbial indicators. ”. Universidade de Aveiro. Aveiro, Portugal,. (see details)
  226. Alcântara F., Almeida M.A., Nicolau F., Qintaneiro I., Rua J. (1991) Qualidade Físico-Química e Microbiológica da Água da Ria de Aveiro. Actas do IV Encontro Nacional de Saneamento Básico. Universidade de Aveiro (pp: 59-83). (see details)
  227. Cunha M.A., Almeida M.A., Alcântara F. (1990) Bacterial populations in the Ria de Aveiro, Western coast of Portugal. (see details)
  228. Almeida MA, Alcântara F (1989) Povoamento Bacteriano de Detritos da Coluna de Água e dos Sedimentos em Estações de Diferente Salinidade do Canal de Mira (Ria de Aveiro). I Encontro Nacional de Planctologistas Portugueses. Universidade de Aveiro. (see details)
  229. Alves E., Melo T., Santos N., Simões C., Maciel E., Dória M.L., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Helguero L., Domingues P., Domingues M.R.M., Almeida A. Photodynamic oxidation of bacterial membrane phospholipids: a new insight provided by lipidomics. (see details)
  230. Almeida A Almeida J, Tomé JP, Neves MGPMS, Tomé AC, Cavaleiro JAS, Cunha A, Costa L,. Faustino MAF Photodynamic processes for disinfection of hospital wastewaters. (see details)
  231. Batalha PN, Gomes ATPC, Forezi LSM, Costa L, Souza MCBV, Boechat FCS, FerreiraVF, Almeida A, Faustino MA, Neves MGPMS, Cavaleiro JAS Antimicrobial photodynamic effect of new porphyrin/4-quinolone conjugates. (see details)
  232. Silva R. .N., Tomé A., Tomé J., Neves M., Faustino M., Cavaleiro J., Oliveira A., Almeida A., Cunha Â. Photoinactivation of Bacillus endospores: inter-specific variability of the inactivation efficiency. (see details)
  1. Tchepel O., Pereira E., Evtyugina M., Almeida A., Cunha A., Nunes T., Duarte R. (2010) Biosphere-Atmosphere Interaction in a Changing Environment: from Local to Global Scale. Workshop Proceeding. CESAM, Universidade de Aveiro. AMB-QA-10/2010, (see details)
  2. Correia A., Duarte A.C., Borrego C., Moreira M.H., Almeida A., Cunha A., Barroso C.M., Lopes C., Pereira E., Queiroga H., Sampaio L., Cunha M.R., Válega M., Monterroso P., Abreu S. (2001) Desassoreamento da Ria de Aveiro/1ª Fase – Monitorização da Qualidade da Água, Sedimentos e Bentos na Ria de Aveiro. Relatório Final,. Instituto de Ambiente e Desenvolvimento. IMA 16.01-00/19, (see details)
  3. Quintino V., Neves R., Leitão P.C., Ferreira J., Coelho H., Silva J.F., Duck R., Duarte A.C., Rocha T., Pereira E., Cunha A., Almeida A., Lopes C., Abreu S., Pereira A., Pereira T., Oliveira M., Henriques I., Rodrigues A., Subida M.D., Oliveira J., Gil O., Santos I., Brito P., Válega M., Granja R., Antunes P., Santos C., Mendonça E., Barreiros A., RAvara A., Monterroso P., Catarino J. (2001) Monitorização Ambiental Associada ao Funcionamento do Emissário de S. Jacinto. Relatório de Progresso. IPIMAR, Inst. Hidrográfico, INETI, Inst. Superior Técnico, Univesidade de Aveiro. (see details)
  1. Coelho F.J.R.C., Santos A.L., Oliveira V., Santos L., Gomes N.C.M., Almeida A., Cunha A. (2011) Padrões de Variação da Actividade Enzimática Extracelular Bacteriana na Ria de Aveiro. Actas das Jornadas da Ria de Aveiro. 295-301. (see details)
  2. Alves E., Arrojado C., Pereira C., Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Almeida A. (2011) Terapia Fotodinâmica Antimicrobiana como Alternativa aos Antibióticos para Inactivar Bactérias Patogénicas em Águas de Piscicultura. In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar. Aveiro. 369 pp. (see details)
    Link: http://la.cesam.ua.pt/encontros_cientificos/2011/LivroActasJornadasRiaAv...
  3. Alves E., Tomé J., Neves G., Tomé A., Cavaleiro J., Faustino A., Cunha Â., Gomes N., Almeida A. (2011) Antimicrobial photodynamic therapy: Low environmental impact approach to inactivate pathogenic bacteria in aquaculture systems. Research Day@UA. University of Aveiro. 8th June 2011, Aveiro, Portugal. (see details)
    Link: http://www.ua.pt/research/PageText.aspx?id=13053
  4. Domingues P.M., Louvado A., Coelho F.J.R.C., Santos A.L., Gomes N.C.M., Almeida A., Cunha A. (2011) Isolamento e Caracterização de Bactérias Produtoras de Biossurfactantes da Ria de Aveiro. In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.). Actas das Jornadas da Ria de Aveiro. CESAM, Universidade de Aveiro. Aveiro. Portugal. 214-218. (see details)
  5. Almeida A., Cunha C. , Gomes N.C.M., Santos L., Mendes C. , Pereira C. (2011) Impacto do Virioplâncton sobre a Comunidade Bacteriana da Ria de Aveiro. Jornadas da Ria de Aveiro (2011). In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar. Aveiro. 369 pp. (see details)
  6. Santos L., Gomes N. C. M., Cunha A., Almeida A. (2011) Variação da abundância e produtividade bacteriana na Ria de Aveiro durante um período de 10 anos (1996-2007) In: Almeida A. AFL, Bernardes C., Dias J. M., Gomes N. C. M., Pereira E., Queiroga H., Serôdio J. e Vaz N. (ed) Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar, Aveiro, p 205-213. (see details)
  7. Pereira C., Silva Y.J., Gomes N.C.M., Cunha A., Almeida A. (2011) Terapia Fágica como Alternativa de Baixo Impacto Ambiental para Inactivar Bactérias Patogénicas em pisciculturas.In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar. Aveiro. pp. 340-348 . (see details)
    Link: http://la.cesam.ua.pt/encontros_cientificos/2011/LivroActasJornadasRiaAv...
  8. Lopes J.F., Almeida M.A., Cunha M.A. (2011) Alves E., Arrojado C., Pereira C., Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Almeida A.(2011) Terapia Fotodinâmica Antimicrobiana como Alternativa aos Antibióticos para Inactivar Bactérias Patogénicas em Águas de Piscicultura. In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar. Aveiro. 369 pp. (see details)
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