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Angela Cunha

Angela Cunha

Assistant Professor

  • Department: Department of Biology
  • Research Group: Marine & Estuarine Ecology
  • ISI Web of KnowledgeSM search factor : ResearcherID=E-9537-2011


Chapters of books

2017 | Cruz, A., Cavaleiro, A.J., Paulo, A., Louvado, A., Alves, M., Almeida, A., Cunha, A. Microbial Remediation of Organometals and Oil Hydrocarbons in the Marine Environment. In: Naik, MM, Dubey, SK (eds.) Marine Pollution and Microbial Remediation. Springer Singapore, Singapore, pp. 41-66 (in press).


2011 | Almeida, A., Cunha, A., Faustino, M.A.F., Tomé, A. C., Neves, M. G. P. M. S. Porphyrins as Antimicrobial Photosensitizing Agents. In: Photodynamic inactivation of microbial pathogens. Medical and environmental applications. M. R. Hamblin, G. Jori (Eds). Comprehensive Series in Photochemistry and Photobiology, Vol. 11, Chapter 5. RSC Publishing, Cambridge, UK, pp: 83-160. ISBN: 978-84973-144-7.


2010 | Coelho, F.J.R., Sousa, S., Santos, L., Santos, A.L., Almeida, A., Gomes, N.C.M., Cunha, A. PAH degrading bacteria in an estuarine system. In: Interdisciplinary Studies on Environmental Chemistry — Biological Responses to Contaminants. Hamamura, N., Suzuki, S., Mendo, S., Barroso, C.M., Iwata, H., Tanabe, S. (Eds.) Terrapub, Tokyo, Japan. pp. 77-87.


2010 | Cunha, A., Almeida, A., Coelho, F.J.R.C., Gomes, N.C.M., Oliveira, V., Santos, A. L. Bacterial Extracellular Enzymatic Activity in Globally Changing Aquatic Ecosystems. Microbiology Book Series, Volume # 2: Current Research, Technology and Education Topics in Applied Microbiology and Microbial Biotechnology, p: 124-135.


2010 | Louvado, L., Santos, A.L., Coelho, F.J.R., Sousa, S., Moreira, A., Gomes, F., Almeida, A., Gomes, N.C.M., Cunha, A. Isolation of Surfactant-Resistant Bacteria from the Surface Microlayer. In: Interdisciplinary Studies on Environmental Chemistry — Biological Responses to Contaminants. Hamamura, N., Suzuki, S., Mendo, S., Barroso, C.M., Iwata, H., Tanabe, S. (Eds.) Terrapub,Tokyo,Japan. pp. 88-95.


2010 | Santos, A.L., Baptista, I., Oliveira, V., Henriques, I., Gomes, N.C.M., Almeida, A., Correia, A., Cunha, A.  Oxidative stress induced by photochemical reactions occuring at the surface microlayer. In: Microorganisms in Industry and Environment: From Scientific and Industrial Research to Consumer Products. Mendez-Vilas, A. (Ed.) World Scientific Publishing Co. Singapura, p:181-184. ISBN-13: 978-981-4322-10-2.


2009 | Oliveira, A., Almeida, A., Carvalho, C., Tomé, J., Faustino, M. A. F., Neves, M. G., Tomé, A. C., Cavaleiro, J., Cunha, A. Assessment of the performance of porphyrin derivatives as photosensitizers for the inactivation of bacterial endospores. In: Current Research Topics in Applied Microbiology and Microbial Biotechnology. Mendez-Vilas A. (Ed). World Scientific Publishing Co. Pte. Ltd.,Singapore, pp: 166-169. ISBN-13: 978-981-283-754-7.


2007 | Almeida, A., Cunha, A., Santos, L., Salvador, S., Gomes, A. Evaluation of the impact of two aquaculture systems on bacterial communities of the estuarine system Ria de Aveiro. In: Current Research Topics in Applied Microbiology and Microbial Biotechnology. Mendez-Vilas A. (Ed). World Scientific Publishing Co. Pte. Ltd., Singapore, pp: 236-239. ISBN-13: 978-981-283-754-7.


2007 | Costa, C., Carvalho, C. M. B., Tomé, J. P. C., Faustino, M. A. F.,  Neves, M. G. P. S., Tomé, A. C., Cavaleiro, J. A. S., Lin, Z., Rainho, J. P., Rocha, J., Cunha, A., Almeida, A. Sewage bacteriophage photoinactivation by immobilized porphyrins in solid matrixes. In: Current Research Topics in Applied Microbiology and Microbial Biotechnology. Mendez-Vilas A. (Ed). World Scientific Publishing Co. Pte. Ltd.,Singapore, pp: 338-341. ISBN-13: 978-981-283-754-7.


2006 | Cunha A., Almeida, A., Ré A., Martins A. e Alcântara, F. Perylene toxicity in the estuarine environment of Ria de Aveiro (Portugal). In: Modern Multidisciplinary Applied Microbiology - Exploiting Microbes and their Interactions. Mendez-Vilas A. (Ed). Wiley-VCH, Weinheim, pp:125-129.

Edition of publications

H. Queiroga, M.R. Cunha, A. Cunha, M.H. Moreira, V. Quintino, A.M.Rodrigues, J. Serôdio, R.M. Warwick (Eds) (2006). Marine Biodiversity: Patterns and processes, Assessment, Threats, Mangement and conservation. Proceedings of the 38th European Marine Biology Symposium, Aveiro, Portugal, September 8-12, 2003. Developments in Hydrobiology 183, Springer. 353 pp.

Publications in peer reviewed international scientific journals

2017 | Castro, K., Moura, N., Fernandes, A., Faustino, M.A., Simões, M., Cavaleiro, J., Nakagaki, S., Almeida, A., Cunha, A., Silvestre, A., Freire, C., Pinto, R. Control of Listeria innocua biofilms by biocompatible photodynamic antifouling chitosan based materials. Dyes Pigments 137: 265-276.


2017 | Fernández, L., Louvado, A., Esteves, V.I., Gomes, N.C.M., Almeida, A., Cunha, A. Biodegradation of 17β-estradiol by bacteria isolated from deep sea sediments in aerobic and anaerobic media. Journal of Hazardous Materials 323, Part A: 359-366.


2016 | Alves, C., Duarte, M., Ferreira, M., Alves, A., Almeida, A., Cunha, A. Air quality in a school with dampness and mould problems. Air Quality, Atmosphere and Health, 9(2):107-115.


2016 | Alves, E., Moreirinha, C., Faustino, M.A.F., Cunha, A., Delgadillo, I., Neves, M.G.P.M.S., Almeida, A. Overall biochemical changes in bacteria photosensitized with cationic porphyrins monitored by infrared spectroscopy. Future Medicinal Chemistry, 8(6):613-628.


2016 | Bartolomeu, M., Rocha, S., Cunha, A., Neves, M.G.P.M.S., Faustino, M.A.F., Almeida, A. Effect of photodynamic therapy on the virulence factors of Staphylococcus aureus. Frontiers in Microbiology, 7:267.


2016 | Bartolomeu, M., Coimbra, S., Cunha, Â., Neves, M.G.P.M.S., Cavaleiro, J.A.S., Faustino, M.A.F., Almeida, A. Indirect and direct damage to genomic DNA induced by 5,10,15-tris(1-methylpyridinium-4-yl)-20-(pentafluorophenyl)porphyrin upon photodynamic action. Journal of Porphyrins and Phthalocyanines, 20: 331–336.


2016 | Baptista I., Rocha, S.M., Cunha, Â., Saraiva, J.A., Almeida, A. Inactivation of Staphylococcus aureus by high pressure processing: An overview. Innovative Food Science & Emerging Technologies, 36:128-149.


2016 | Coelho, F.J.R.C., Louvado, A., Domingues, P.M., Cleary, D., Ferreira, M., Almeida, A., Cunha, M.R., Cunha, A., Gomes, N.C.M. Integrated analysis of bacterial and microeukaryotic communities in mud volcanoes with differential activity in the Gulf of Cadiz. Scientific Reports, 6:35272.


2016 | Fernández, L., Esteves, V.I., Cunha, A., Schneider, R.J., Tomé, J.P.C. Photodegradation of organic pollutants in water by immobilized porphyrins and phthalocyanines. Journal of Porphyrins and Phthalocyanines, 20: 150–166.


2016 | Ferreira, M., Pereira, S., Almeida, A., Queirós, R., Delgadillo, I., Saraiva, J., Cunha, A. Effect of temperature and compression/decompression rates on high pressure inactivation of Listeria. Acta Alimentaria 45(1): 61-68.


2016 | Ferreira, M., Almeida, A., Delgadillo, I., Saraiva, J., Cunha, A. Susceptibility of Listeria monocytogenes to high pressure processing: a review. Food Reviews International, 4:377–399.


2016 | Gomes, M.C., Cunha, A., Trindade, T., Tomé, J.P.C. The Role of Surface Functionalization of Silica Nanoparticles for Bioimaging Journal of Innovative Optical Health Sciences, 9(4):1630005 (16 pages).


2016 | Santos, L., Pinto, A., Filipe, O.M.S., Cunha, A., Santos, E.B.H., Almeida, A. Insights on the optical properties of estuarine DOM - hydrological and biological influences. PLoS ONE 11(5):e0154519.


2016 | Silva, Y. J., Moreirinha, C., Pereira, C., Costa, L., Rocha, R. J. M., Cunha, Â., Gomes, N.C.M., Calado, R., Almeida A. Biological control of Aeromonas salmonicida infection in juvenile Senegalese sole (Solea senegalensis) with Phage AS-A. Aquaculture, 450: 225-233.


2016 | Simões, C., Gomes, M. C., Neves, M. G. P. M. S., Cunha, Â., Tomé, J. P. C., Tomé, A. C., Cavaleiro, J. A. S., Almeida A., Faustino M. A. F. Photodynamic inactivation of Escherichia coli with cationic meso-tetraarylporphyrins – The charge number and charge distribution effects. Catalysis Today 266:197-204.


2015 | Alves, E., Esteves, A.C., Correia, A., Cunha, A., Faustino, M.A.F., Neves, M.G.P.M.S., Almeida, A. Protein profiles of Escherichia coli and Staphylococcus warneri are altered by photosensitization with cationic porphyrins. Photochemical & Photobiological Sciences, 14, 1169 - 1178.


2015 | Alves, E., Faustino, M.A.F., Neves, M.G.P.M.S., Cunha, A., Nadais, H., Almeida, A. Potential applications of porphyrins in photodynamic inactivation beyond the medical scope. Journal of Photochemistry and Photobiology C: Photochemistry Reviews 22:34–57.


2015 | Baptista, I., Queirós, R., Cunha, A., Saraiva, J., Rocha, S.M., Almeida, A. Inactivation of enterotoxic and non-enterotoxic Staphylococcus aureus strains by high pressure treatments and evaluation of its impact on virulence factors. Food Control 57: 252-257.


2015 | Baptista I., Queirós R.P., Cunha A., Rocha S.M., Saraiva J.A., Almeida A. (2015) Evaluation of resistance development and viability recovery by toxigenic and non-toxigenic Staphylococcus aureus strains after repeated cycles of high hydrostatic pressure. Food Microbiology. 46, 515-520.


2015 | Coelho, F.J.C.R., Cleary, D.F.R., Rocha, R.J.M., Calado, R., Castanheira, J., Silva, A.M.S., Simões, M.M.Q., Oliveira, V., Lillebo, A., Almeida, A., Cunha, A., Lopes, I., Ribeiro, R., Moreira-Santos, M., Marques, C.R., Costa, R., Pereira, R., Gomes, N.C.M. Unraveling the interactive effects of climate change and oil contamination on lab-simulated estuarine benthic communities. Global Change Biology, 21:1871-1886.


2015 | Lopes, D., Melo, T., Alves, E., Gomes, M.C., Cunha, A., Faustino, M.A.F., Neves, M.G.P.M.S., Domingues, M.R.M., Almeida, A. Evaluation of the interplay among the charge of porphyrinic photosensitizers, lipid oxidation and photoinactivation efficiency in Escherichia coli. Journal of Photochemistry and Photobiology B: Biology, 141:145–153.


2015 | Lourenço, L.M.O., Sousa, A., Gomes, M.C., Faustino, M.A.F., Almeida, A., Neves, M.G.P.M.S., Cavaleiro, J.A.S., Cunha, A., Tomé, J.P.C. Inverted methoxypyridinium phthalocyanines for PDI of pathogenic bacteria. Photochemical & Photobiological Sciences, 14:853–1863.


2015 | Louvado, A., Gomes, N.C.M., Simões, M.M.Q., Almeida, A., Cunha, A. Polycyclic aromatic hydrocarbons in deep sea sediments: microbe-pollutant interactions in a remote environment. Science of the Total Environment, 526:312-328.


2015 | Maia, F., Silva, A.P., Fernandes, S., Cunha, A., Almeida, A., Tedim, J., Zheludkevich, M.L.,. Ferreira, M.G.S. Incorporation of biocides in nanocapsules for protective coatings used in maritime applications. Chemical Engineering Journal, 270: 150-157.


2015 | Martins, C., Correia, V.G., Aguiar-Ricardo, A., Cunha, A., Moutinho, M.G.M., Functionalized oxazoline based oligomers as broad spectrum antimicrobial agents for oral applications. SpringerPlus, 4(1):1-5.


2015 | Matos, M. R. A., Gomes, M. T. S. R., Oliveira, J. A. B. P., Alves, E., Cunha, M. A. S. D. A., Almeida, A., Rudnitskaya, A. Assessment of transition metals toxicity in environmental matrices using potentiometric electrodes: inorganic mercury(ii) in the seawater as a case study. Electroanalysis, 27(8):1932-1938.


2015 | Pereira, C., Santos, L., Silva, Y.J., Cunha, A., Romalde, J., Nunes, M.L., Almeida, A. Seasonal variation of bacterial communities in shellfish harvesting waters: Preliminary study before applying phage therapy. Marine Pollution Bulletin 90(1–2):68–77.


2015 | Oliveira, V., Gomes, N.C., Almeida, A., Silva, A.M., Silva, H., Cunha, Â. (2014) Microbe-assisted phytoremediation of hydrocarbons in estuarine environments. Microbial Ecology, 69(1):1-12.


2015 | Rocha, D.M., Venkatramaiah, N., Gomes, M.C., Almeida, A., Faustino, M.A., Paz, F.A., Cunha, Â., Tomé, J.P. "Photodynamic inactivatio F.n of Escherichia coli with cationic ammonium Zn (ii) phthalocyanines." Photochemical & Photobiological Sciences 14(10): 1872-1879.


2015 | Silva, Y.J., Manco, S., Costa, R., Rodrigues, V., Dias, J., Ferreira, H., Pousão-Ferreira, P., Almeida, A., Cunha, A., Calado, R., Gomes, N.C.M. Effect of different culture conditions on the structural diversity of prokaryote communities in the sediment of earth ponds stocked with gilthead seabream Sparus aurata (Linnaeus, 1758). Aquaculture Research, 46(7):1760-1769.


2015 | Sousa, I., Maia, F., Silva, A., Cunha, A., Almeida, A., Evtyugin, D.V., Tedim, J., Ferreira, M.G. A novel approach for immobilization of polyhexamethylene biguanide within silica capsules. RSC Advances, 5(112):92656-92663.


2014 | Almeida, J., Tomé, J.P.C., Neves, M.G.P.M.S., Tomé, A.C., Cavaleiro, J.A.S., Cunha, Â., Costa, L., Faustino, M.A.F. Almeida, A. Photodynamic inactivation of multidrug-resistant bacteria in hospital wastewaters: influence of residual antibiotics. Photochemical & Photobiological Sciences, 13, 626-633.


2014 | Alves, E., Fustino, M.A.F., Neves, M.G.P.M.S., Cunha, A., Tomé, J., Almeida, A. An insight on bacterial cellular targets of photodynamic inactivation. Future Medical Chemistry (2014) 6(2), 141–164.


2014 | Alves, E., Rodrigues, J., Faustino, M.A.F., Nevs, M.G.P.M.S., Cavaleiro, J.A.S., Lin, Z., Cunha, A., Nadais, M. H., Tomé, J., Almeida, A. A new insight on nanomagnetic-porphyrin hybrids for photodynamic inactivation of microorganisms. Dyes & Pigments, 110:80-88.


2014 | Baptista, I., Santos, A.L., Pereira, C. Cunha, A., Gomes, N.C.M.,  Almeida, A. Influence of incubation conditions on bacterial production estimates in an estuarine system. Aquatic Ecology, 48(3): 327-336.


2014 | Beirão, S., Fernandes, S., Coelho, J., Faustino, M.A.F. Tomé, J.P.C, Neves, M.G.P.M.S., Tomé, A., Almeida, A., Cunha, A. Photodynamic inactivation of bacterial and yeast biofilms with a cationic porphyrin. Photochemistry & Photobiology, 90(6):1387–1396.


2014 | Gomes, N.C.M., Cleary, D.F.R., Manco, S., Ladeiro, B.C.F., Almeida, A., Cunha, A., Mendonça-Hagler, L.C.S., Smalla, K., Assessing variation in bacterial composition between the rhizospheres of two mangrove tree species. Estuarine, Coastal and Shelf Science 139(0): 40-45.


2014 | Mendes, C., Cunha, A., Gomes, N., Almeida, A. Proportion of prokaryotes enumerated as viruses by epifluorescence microscopy. Annals of Microbiology, 64(2): 773-778.


2014 | Mesquita, M.Q., Menezes, J.C., Pires, S.M., Neves, M.G.P.M.S., Simões, M.M., Tomé, A.C., Cavaleiro, J.A., Cunha, A., Almeida, A Daniel-da-Silva, A.L., Faustino, M.A.F. Pyrrolidine-fused chlorin photosensitizer immobilized on solid supports for the photoinactivation of Gram negative bacteria. Dyes and Pigments, 110: 123–133.


2014 | Mesquita, M.Q., Menezes, J.C.J.M.D.S., Neves, M.G.P.M.S., Tomé, A.C., Cavaleiro, J.A.S., Cunha, Â., Almeida, A., Hackbarth, S. Röder, B., Faustino M.A.F. Photodynamic inactivation of bioluminescent Escherichia coli by neutral and cationic pyrrolidine-fused chlorins and isobacteriochlorins. Bioorganic & Medicinal Chemistry Letters, 24(3): 808-812.


2014 | Oliveira, V., Gomes, N.C.M., Cleary, D.F.R., Almeida, A., Silva, A.M.S., Simões, M.M.Q., Silva, H., Cunha, A. Halophyte plant colonization as a driver of the composition of bacterial communities in salt marshes chronically exposed to oil hydrocarbons. FEMS Microbiology Ecology, 90(3):647–662.


2014 | Oliveira, V., Gomes, N. C. M., Almeida, A. Silva, H.M.S., Simões, M.M.Q., Smalla, K., Cunha, Â. Hydrocarbon contamination and plant species determine the phylogenetic and functional diversity of endophytic degrading bacteria. Molecular Ecology 23, 1392-1404.


2014 | Pereira M., Faustino M., Tomé J., Neves G. , Tomé A., Cavaleiro J., Cunha A, Almeida A. Influence of external bacterial structures in the efficiency of photodynamic inactivation by a cationic porphyrin. Photochemical & photobiological Sciences 13, 680-690.


2014 | Santos, A.L., Baptista, I., Gomes, N.C.M., Henriques, I., Almeida, A., Correia, A., Cunha, A. Contribution of chemical water properties to the differential responses of bacterioneuston and bacterioplankton to ultraviolet-B radiation. FEMS Microbiology Ecology, 87(2): 517-535.


2014 | Santos, L.M.P., Santos, A.L., Coelho, F.J.C.R., Gomes, N.C.M., Dias, J.M., Cunha, A., Almeida, A. Heterotrophic activities of neustonic and planktonic bacterial communities in an estuarine environment (Ria de Aveiro). Journal of Plankton Research 36: 230-242.


2014 | Santos, L.M.P., Vaz, L., Gomes, N.C.M., Vaz, N., Dias, J.M., Cunha, A., Almeida, A. Impact of freshwater inflow on bacterial abundance and activity in the estuarine system Ria de Aveiro Estuarine. Estuarine Coastal and Shelf Science,138(0): 107-120.


2014 | Silva, Y. J., L. Costa, C. Pereira, Â. Cunha, R. Calado, N. C. M. Gomes and A. Almeida. Influence of environmental variables in the efficiency of phage therapy in aquaculture. Microbial Biotechnology, 7: 401–413.


2014 | Silva, Y., Costa, L., Pereira, C., Mateus, C., Cunha, A., Calado, R., Gomes, N.C.M., Pardo, M., Hernandez, I., Almeida, A. Phage therapy as an approach to prevent Vibrio anguillarum infections in fish larvae production. PLoS ONE 9(12):e114197.


2013 | Alves, E., Melo, T., Simões, C., Faustino, M.A., Tomé, .JP., Neves, M.G., Cavaleiro, J.A., Cunha, Â., Gomes, N., Domingues, P. (2013) Photodynamic oxidation of Staphylococcus warneri membrane phospholipids: new insights based on lipidomics. Rapid Communications in Mass Spectrometry 27:1607-1618.


2013 | Alves, E., Faustino, M.A.F., Tomé, J.P.C., Neves, M.G.P.M.S.,  Tomé, A.C., Cavaleiro, J.A.S., Cunha, A., Gomes, N.C.M., Almeida, A. Nucleic acid changes during photodynamic inactivation of bacteria by cationic porphyrins. Bioorganic & Medicinal Chemistry, 21(17):4311-4318.


2013 | Coelho, F.J.R.C., Rocha, R.J.M., Pires, A.C.C., Ladeiro, B., Castanheira, J. M., Costa, R., Almeida, A., Cunha, A., Lillebø, A.I., Ribeiro, R., Pereira, R., Lopes, I., Marques, C., Moreira-Santos, M., Calado, R., Cleary, D.F.R., Gomes, N.C.M. Development and validation of an experimental life support system for assessing the effects of global climate change on coastal and estuarine marine benthic communities. Global Change Biology 19:2584–2595.


2013 | Coelho, F., Santos, A., Coimbra, J., Almeida, A., Cunha, Â., Cleary, D., C. Ricardo; Gomes, N. Interactive effects of global climate change and pollution on marine microbes: the way ahead. Ecology and Evolution, 3(6): 1808-1818.


2013 | Costa, L. Faustino, M.A.F., Tomé, J.P.C., Neves, M.G.P.M.S., Tomé, A. C., Cavaleiro, J.A.S., Cunha, A., Almeida, A. Involvement of type I and type II mechanisms on the photoinactivation of non-enveloped DNA and RNA bacteriophages. Journal of Photochemistry and Photobiology B: Biology, 120: 10-16.


2013 | Domingues, P.M., Louvado, A., Oliveira, V., Coelho, F.J.C.R., Almeida, A. Gomes, N.C.M., Cunha, A. Selective cultures for the isolation of biosurfactant producing bacteria: comparison of different combinations of environmental inocula and hydrophobic carbon sources. Preparative Biochemistry & Biotechnology, 43(3): 237-55.


2013 | Gomes, M.C., Fernandes, R., Cunha, A., Tomé, J.P.C., Trindade, T. Fluorescence biolabeling using methylated silica nanoparticles containing a lanthanide complex. Journal of Materials Chemistry B, 1:5429-5435.


2013 | Gomes, M.C., Silva, S., Faustino, M.A.F., Neves, M.G.P.M.S., Almeida, A., Cavaleiro, J.A.S., Tomé, J.P.C., Cunha, A. Cationic galactoporphyrin photosensitisers against UV-B resistant bacteria: oxidation of lipids and proteins by 1 O2. Photochemical & Photobiological Sciences 12: 262–271.


2013 | Oliveira, J., Cunha, Â., Almeida, A., Castilho, F. and Pereira, M. Comparison of Methodologies for the Extraction of Bacterial DNA from Mussels — Relevance for Food Safety. Food Analytical Methods, 6(1) 201-209.


2013 | Salvador, A.C., Baptista, I., Barros, A.S., Gomes, N., Cunha, A., Almeida, A., Rocha, S.M. Can volatile organic metabolites be used to simultaneously assess microbial and mite contamination level in cereal grains and coffee beans? PLoS One, PLoS ONE 8(4):e59338.


2013 | Santos, A.L., Gomes, N.C.M., Henriques, I., Almeida, A., Correia, A., Cunha, A. Role of transition metals in UV-B induced damage to bacteria. Photochemistry and Photobiology, 89(3):640-8.


2013 | Santos, A.L., Henriques, I., Gomes, N.C.M., Almeida, A., Correia, A., Cunha, A. Growth conditions influence UVB sensitivity and oxidative damage in an estuarine bacterial isolate. Photochemical & Photobiological Science, 12:974-986.


2013 | Santos, A.L., Moreirinha, A.C., Lopes, D., Esteves, A.C., Henriques, I., Almeida, A., Domingues, M.R., Delgadillo, I., Correia, A., Cunha, A. Effects of UV Radiation on the Lipids and Proteins of Bacteria Studied by Mid-Infrared Spectroscopy. Environmental Science & Technology, 47 (12):6306–6315.


2013 | Santos, A.L. Oliveira, V., Baptista, I., Henriques, I., Gomes, N.C.M., Almeida, A., Correia, A., Cunha, A. Wavelength dependence of biological damage induced by UV radiation on bacteria. Archives of Microbiology. 195, 1, 63-74.


 


2012 | Costa, D.C.S., Gomes, M.C., Faustino, M.A.F., Neves, M.G.P.M.S., Cunha, A., Cavaleiro, J.A.S., Almeida, A., Tomé, J.P.C. Comparative photodynamic inactivation of antibiotic resistant bacteria by first and second generation cationic photosensitizers. Photochemical & Photobiological Sciences, 11, 1905–1913.


2012 | Costa, L., Faustino, M.A.F., Neves, M.G.P.M.S., Cunha, A., Almeida, A., Photodynamic inactivation of mammalian viruses and bacteriophages. Viruses 4, 1034-1074.


2012 | Costa, L., Tomé, J.P.C., Neves, M.G.P.M.S., Tomé, A. C., Cavaleiro, J.A.S., Cunha, A., Faustino, M.A.F., Almeida, A. Susceptibility of non-enveloped DNA- and RNA–type viruses to photodynamic inactivation. Photochemical & Photobiological Sciences. 11 (10):1520-1523.


2012 | Cruz A., Oliveira V., Baptista I., Almeida A., Cunha A., Suzuki S., Mendo S. Effect of tributyltin (TBT) in the metabolic activity of TBT-resistant and sensitive estuarine bacteria. Environmental Toxicology. 27(1): 11-17.


2012 | Louvado, A., Coelho, F., Domingues, P., Santos, A.L., Gomes, N.C.M., Almeida, A., Cunha, A. Isolation of Surfactant-Resistant Pseudomonads from the Estuarine Surface Microlayer. Journal of Microbiology and Biotechnology, 22(3):283-291.


2012 | Nogueira, V.I.J.O., Lopes, I., Rocha-Santos, T., Santos, A.L., Rasteiro, M.G., Antunes, F., Gonçalves, F., Soares, A.M.V.M., Almeida, A., Cunha, A., Gomes, N.C.M., Pereira, R. Impact of organic and inorganic nanomaterials on the structure of the soil microbial community. Science of the Total Environment, 424, 344-350.


2012 | Oliveira, J., Cunha, A., Castilho, F., Pereira, M.J. Bacteriophage therapy as a bacterial control strategy in aquaculture. Aquaculture International. 20:879–910


2012 | Oliveira, J., Cunha, Â., Almeida, A., Castilho, F. and Pereira, M. Comparison of Methodologies for the Extraction of Bacterial DNA from Mussels — Relevance for Food Safety. Food Analytical Methods, 6(1) 201-209[A1] .


2012 | Oliveira, V., Santos, A.L., Aguiar, C., Santos, L., Salvador, A.C., Gomes, N.C.M., Silva, H., Rocha, S. M., Almeida, A., Cunha, A. Prokaryotes in saltmarsh sediments of Ria de Aveiro: Effects of halophyte vegetation on abundance and diversity. Estuarine, Coastal and Shelf Science 110, 61-68.


2012 | Pereira, J. B., Carvalho, E.F.A., Faustino, M.A.F., Fernandes, R., Neves, M.G.P.M.S., Cavaleiro, J.A.S., Gomes, N.C.M, Cunha, A., Tomé, J.P.C. Phthalocyanine thio-pyridinium derivatives as antibacterial photosensitizers. Photochemistry & Photobiology, 88(3):537-547.


2012 | Pires, A.C.C., Cleary, D.F.R., Almeida, A., Cunha, A., Dealtry, S., Mendonça-Hagler, L.C.S., Smalla, K., Gomes, N.C.M. Denaturing gradient gel electrophoresis (DGGE) and barcoded-pyrosequencing reveal unprecedented archaeal diversity in mangrove sediment and rhizosphere samples. Applied Environmental Microbiology 78(16): 5520-5528.


2012 | Prata, C., Ribeiro, A., Cunha, A., Gomes, N.C.M., Almeida, A. Ultracentrifugation as a direct method to concentrate viruses in environmental waters: virus-like particles enumeration as a new approach to determine the efficiency of recovery. Journal of Environmental Monitoring, 14(1):64-70.


2012 | Santos, A.L., Gomes, N.C.M., Henriques, I., Almeida, A., Correia, A., Cunha, A. Contribution of reactive oxygen species to UV-B-induced damage in bacteria. Journal of Photochemistry and Photobiology B: Biology 117: 40-46.


2012 | Santos, A.L. Lopes, S., Batista, I., Henriques, I., Gomes, N.C.M., Almeida, A., Correia, A., Cunha, A. The UV Responses of bacterioneuston and bacterioplankton isolates depend on the physiological condition and involve a metabolic shift. FEMS Microbiology Ecology, 80(3): 646-658.


2012 | Santos, A.L., Oliveira, V., Baptista, I., Henriques, I., Gomes, N.C.M., Almeida, A., Correia, A., Cunha, A. Effects of UV-B radiation on the structural and physiological diversity of bacterioneuston and bacterioplankton. Applied Environmental Microbiology, 78(6):2066-2069.


2012 | Silva, R., Tomé, A., Tomé, J., Neves, M.G.P.M.S., Faustino, M.A.F., Cavaleiro, J.A.S., Oliveira, A., Al, Jmeida, A., Cunha, A. Photoinactivation of Bacillus endospores: inter-specific variability of the inactivation efficiency. Microbiology and Immunology 56: 692-699.


2012 | Vieira, A., Silva, Y.J., Cunha, Â., Gomes, N.C.M., Almeida, A. Phage therapy to control multidrug-resistant Pseudomonas aeruginosa skin infections: in vitro and ex vivo experiments. European Journal of Clinical Microbiology & Infectious Diseases. 31(11):3241-3249.


2011 | Alves, E., Faustino, M.A.F., Tomé, J.P.C., Neves, M.G.P.M.S., Tomé, A.C., Cavaleiro, J.A.S., Cunha, A., Gomes, N.C.M., Almeida, A. Photodynamic antimicrobial therapy in aquaculture: photoinactivation studies of Vibrio fischeri. PLoS ONE 6(6): e20970. doi:10.1371/journal.pone.0020970.


2011 | Alves, E., Almeida, A., Costa, L., Cunha, A., Faustino, A., Neves, G. Bioluminescence and its application in the monitoring of antimicrobial photodynamic therapy Applied Microbiology and Biotechnology. 92(6):1115-1128.


2011 | Arrojado, C., Pereira, C., Carvalho, C.M.B., Tomé, J.P.C., Faustino, M.A.F., Neves, M.G.P.M.S., Tomé, A.C., Cavaleiro, J.A.S., Cunha, A., Gomes, N.C.M., Almeida, A. Applicability of photodynamic antimicrobial chemotherapy as an alternative to inactivate fish pathogenic bacteria in aquaculture systems. Photochemical & Photobiological Sciences 10(10):1691-1700.


2011 | Baptista, I., Santos, A. L., Cunha, A., Gomes, N., Almeida, A. Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation. Aquatic Microbial Ecology 62(3): 299-310.


2011 | Costa, L. Tomé, J.P.C., Neves, M.G.P.M.S., Tomé, A.C., Cavaleiro, J.A.S., Faustino, F.A.F., Cunha, A., Gomes, N.C.M., Almeida, A. Evaluation of resistance development and viability recovery by a non-enveloped virus after repeated cycles of aPDT. Antiviral Research, 91(3), 278-282.


2011 | Coelho, F.J.R.C., Sousa, S., Santos, L., Santos, A.L., Almeida, A., Gomes, N.C.M., Cunha, A. Exploring the hydrocarbonoclastic bacterial communities in the estuarine surface microlayer. Aquatic Microbial Ecology, 64:185-195.


2011 | Gomes, M.C., Woranovicz-Barreira, S.M., Faustino, M.A.F.,  Fernandes, R., Neves, M.G.P.M.S., Tomé, A.C., Gomes, N.C.M., Almeida, A., Cavaleiro, J.A.S., Cunha, A., Tomé, J.P.C. Photodynamic inactivation of Penicillium chrysogenum conidia by cationic porphyrins. Photochemical & Photobiological Sciences 10, 1735-1743.


2011 | Oliveira, J., Cunha, A., Castilho, F., Romalde, J.L. Pereira, M.J. Microbial contamination and purification of bivalve shellfish: Crucial aspects in monitoring and future perspectives - A mini-review. Food Control 22, 805-816.


2011 | Pereira, C., Salvador, S., Arrojado, C., Silva, Y.S., Santos, A.L., Cunha, A., Gomes, N.C.M., Almeida, A. Evaluating seasonal dynamics of bacterial communities in marine fish aquaculture: a preliminary study before applying phage therapy. Journal of Environmental Monitoring, 13 (4):1053-1058.


2011 | Pereira, C., Silva, Y.S., Cunha, A., Gomes, N.C.M., Almeida, A. Bacteriophages with potential for inactivation of fish pathogenic bacteria: survival, host specificity and effect on bacterial community structure. Marine Drugs, 9(11), 2236-2255.


2011 | Prata, C., Ribeiro, A., Cunha, A., Gomes, N.C.M., Almeida, A. Ultracentrifugation as a direct method to concentrate viruses in environmental waters: virus-like particles enumeration as a new approach to determine the efficiency of recovery. Journal of Environmental Monitoring, 14(1):64 - 70.


2011 | Santos, A.L., Henriques, I., Correia, A., Gomes, N.C.M., Almeida, A., Cunha, A. Effects of ultraviolet radiation on the abundance, diversity and activity of bacterioneuston and bacterioplankton: Insights from microcosm studies. Aquatic Sciences, 73(1):63–77.


2011 | Santos, A.L., Lopes, S., Baptista, I., Henriques, I., Gomes, N.C.M., Almeida, A., Correia, A., Cunha, A. Diversity in UV sensitivity and recovery potential among bacterioneuston and bacterioplankton isolates. Letters in Applied Microbiology 52: 360-366.


2011 | Santos, L., Santos, A., Coelho, F., Gomes, N.C.M., Dias, J., Cunha, A., Almeida, A. Relation between bacterial activity at the surface microlayer and estuarine hydrodynamics. FEMS Microbiology Ecology 77(3):636-646.


2011 | Tavares, A., Dias, S.R.S., Carvalho, C.M.B., Faustino, M.A.F., Tomé, J.P.C., Neves, M.G.P.M.S., Tomé, A.C., Cavaleiro, J.A.S., Cunha, A., Gomes, N.C.M., Alves, E., Almeida, A. Mechanisms of photodynamic inactivation of a Gram-negative recombinant bioluminescent bacterium by cationic porphyrins. Photochemical & Photobiological Sciences 10(10): 1659 - 1669.


2010 | Carvalho, C., Alves, E., Costa, L., Tomé, J., Faustino, M., Neves, M., Tomé, A., Cavaleiro, J., Almeida, M., Cunha, A., Rocha, J., Lin, Z. Functional Cationic Nanomagnet-Porphyrin Hybrids for the Photoinactivation of Microorganisms. ACS Nano 4, 12, 7133–7140.


2010 | Costa L., Carvalho C., Tomé J., Faustino A., Neves G., Tomé A., Cavaleiro J., Cunha A., Almeida A. Sewage bacteriophage inactivation by cationic porphyrins: influence of light parameters. Photochemical & Photobiological Sciences. 9, 1126-1133.


2010 | Gomes, N.C.M., Cleary, D.F.R., Pinto, F.N., Egas, C., Almeida, A., Cunha, A., Mendonça-Hagler, L.C.S., Smalla, K. Taking root: enduring effect of rhizosphere bacterial colonization in mangroves. PLoS ONE 5(11): e14065. doi:10.1371/journal.pone.0014065


2010 | Lopes, J. F., Almeida, M.A., Cunha, A. Modelling the ecological patterns of a temperate lagoon in a very wet spring season. Ecological Modelling, 221:2302-2322.


2010 | Oliveira, V., Santos, A. L., Coelho, F., Gomes, N.C.M., Almeida, A., Cunha, A. Effects of monospecific banks of salt marsh vegetationon sediment bacterial communities. Microbial Ecology, 60(1):167–179.


2010 | Tavares, A., Carvalho, C.M.B., Faustino; M.A., Neves, M.G.P.M.S., Tomé, J.P.C., Tomé, A.C., Cavaleiro, J.A.S., Cunha, A.,  Gomes, N., Alves, E., Almeida, A. Antimicrobial photodynamic therapy: study of bacterial recovery viability and development of potential resistance after treatment. Marine Drugs 8(1): 91-105.


2009 | Almeida A., Cunha Â., Gomes N. C., Alves E., Costa L., Faustino M. A. Phage Therapy and Photodynamic Therapy: Low Environmental Impact Approaches to Inactivate Microorganisms in Fish Farming Plants. Marine Drugs, 7(3):268-313.


2009 | Alves, E., Costa, L., Carvalho, C.M.B., Tomé, J.P.C., Faustino, M.A.F., Neves, M.G.P.S., Tomé, A.C., Cavaleiro, J.A.C., Cunha, A., Almeida, A. Charge effect on the photoinactivation of Gram-negative and Gram-positive bacteria by cationic meso-substituted porphyrins. BMC Microbiology, 9:70-83.


2009 | Carvalho, C.M.B., Tomé, J.P.C., Faustino, M.A.F., Neves, M G.P.M.S., Tomé, A.C., Cavaleiro, J.A.S., Costa, L., Alves, E., Oliveira, A., Cunha, A., Almeida, A. Antimicrobial photodynamic activity of porphyrin derivatives: Potential application on medical and water disinfection. Journal of Porphyrins and Phthalocyanines, 13: 574–577.


2009 | Cunha, A., Almeida, A. Inorganic nutrient regulation of bacterioplankton heterotrophic activity in an estuarine system (Ria de Aveiro, Portugal). Hydrobiologia, 628(1):81-93.


2009 | Lopes, A.R., Azeiteiro, U.M., Bessa, V.S., Pereira, C., Salvador, S., Almeida, A., Cunha, M.A., Pereira, M.J. Spring pelagic communties of phytoplankton, cyanobacteria, associated heterotrophic bacteria and viruse in an eutrophic shallow temperate lake. Fresenius Environmental Bulletin, 18(5b):875-884.


2009 | Oliveira, A., Almeida, A., Carvalho, C. M. B., Tomé, J. P. C., Faustino, M. A. F., Neves, M. G. P. M. S., Tomé, A. C., Cavaleiro, J. A. S., Cunha, A. Porphyrin derivatives as photosensitizers for the inactivation of Bacillus cereus endospores. Journal of Applied Microbiology, 106:1986–1995.


2009 | Santos, A.L., Mendes, C., Gomes, N.C.M., Henriques, I., Correia, A., Almeida, A., Cunha, A. Short-term variability of abundance, diversity and activity of estuarine bacterioneuston and bacterioplankton. Journal of Plankton Research, 31(12):1545-1555.


2008 | Alves, E., Carvalho, C. M. B. Tomé, J. P. C., Faustino, M. A. F., Neves, M. G. P. S., Tomé, A. C., Cavaleiro, J. A. S., Cunha, A., Mendo, S., Almeida, A. Photodynamic inactivation of recombinant bioluminescent Escherichia coli by cationic porphyrins under artificial and solar irradiation. Journal of Industrial Microbiology & Biotechnology, 35(11):1447-54.


2008 | Costa, L., Alves, E., Carvalho, C. M. B., Tomé, J. P. C., Faustino, M. A. F., Neves, M. G. P. S., Tomé, A. C., Cavaleiro, J. A. S., Cunha, A., Almeida, A. Sewage bacteriophage photoinactivation by cationic porphyrins: a study of charge effect. Photochemical and Photobiological Sciences, 7:415- 422.


2007 | Almeida, M. A., Cunha, M. A., Dias, J. Bacterial productivity distribution during a rainy year in an estuarine system. Microbial Ecology, 53:208–220.


2007 | Almeida, M. A., Cunha, M. A., Fernandes, S., Sobral, P., Alcântara, F. Copper effects on bacterial activity of estuarine silty sediments. Estuarine, Coastal and Shelf Science, 73: 743-752.


2007 | Carvalho, C., Gomes, A., Fernandes, S., Prata, A., Almeida, M. A., Cunha, M. A., Tomé, J., Faustino, M. A., Neves, M. G., Tomé, A., Cavaleiro, J. A., Lin, Z., Rainho, J., Rocha, J. Photoinactivation of bacteria in wastewater by porphyrins: Bacterial b-galactosidase activity and leucine-uptake as methods to monitor the process. Journal of Photochemistry and Photobiology B: Biology, 88:112–118.


2007 | Santos, L., Cunha, M.A., Silva, H., Caçador, I., Dias, J.M., Almeida M.A. Influence of salt marsh on bacterial activity in two estuaries with different hydrodynamic characteristics (Ria de Aveiro and Tagus Estuary). FEMS Microbiology Ecolology, 60:429–441.


2006 | Cunha, A., Almeida, A. Influence of an estuarine plume and a marine sewage outfall on the dynamics of coastal bacterioplankton communities. Aquatic Microbial Ecology, 44:253-262.


2006 | Cunha, A., Almeida, A., Ré A., Martins A., Alcântara, F. Perylene toxicity in the estuarine environment of Ria de Aveiro (Portugal). Ecotoxicology, 15(2):171-185.


2006 | Henriques, I. S., Alves, A., Tacão, M., Almeida, A., Cunha, A., Correia, A. Seasonal and spatial variability of free-living bacterial community composition along an estuarine gradient (Ria de Aveiro, Portugal). Estuarine, Coastal and Shelf Science, 68:139-148.


2005 | Almeida, M. A., Cunha, M. A., Alcântara, F. Relationship of bacterioplankton production with primary production and respiration in a shallow estuarine system (Ria de Aveiro, NW Portugal). Microbiological Research 160(3):315-328.


2005 | Cunha, A., Pedro, R., Almeida, A., Silva, H. Activity and growth efficiency of heterotrophic bacteria in a salt marsh (Ria de Aveiro, Portugal). Microbiological Research, 160(3): 279-290.


2004 | Henriques, I., Almeida, A., Cunha, A., Correia, A. Molecular sequence analysis of prokaryotic diversity in the middle and outer sections of the Portuguese estuary Ria de Aveiro. FEMS Microbiology Ecology, 49:269–279.


2004 | Pato, P., Pinto, C., Cunha, A., Almeida, M.A., Pereira, E., Vale, C., Duarte A. Tidal variability in the transport of particulate mercury. RMZ – Materials and Geoenvironment, 51(1):1300-1303.


2004 | Yamasaki, A., Cunha, M.A.S.D.A, Oliveira, J. A. B. P., Duarte, A. C., Gomes, M. T. S. R. Assessment of copper toxicity using an acoustic wave sensor. Biosensors & Bioelectronics, 19:1203-1208.


2003 | Cunha, M. A., Almeida, M. A., Alcântara, F. Ectoenzymatic activity and glucose heterotrophic metabolism in a shallow estuary (Ria de Aveiro, Portugal): influence of bed sediments and salt marshes. Acta Oecologica 24: S97-S107.


2003 | Cunha, M. A., J. M. Dias, Almeida, M. A., Lopes, J. F., Alcântara, F. Fluxes of bacterioplankton between a tidal estuary and the sea: returning to the “Outwelling Hypothesis”. Aquatic Ecology, 37(1):45-54.


2002 | Almeida, M. A., Cunha, M. A., Alcântara, F. Is bacterioplankton production in the Ria de Aveiro influenced by of salt marshes and bed sediment? Aquatic Ecology, 36(4):469-482.


2002 | Almeida, M. A., Cunha, M. A., Alcântara, F. Seasonal changes in the proportion of bacterial and phytoplankton production along a salinity gradient in a shallow estuary. Hydrobiologia, 475(1):251-262.


2001 | Almeida, M. A., Cunha, M. A., Alcântara, F. Factors influencing bacterial production in shallow estuarine systems. Microbial Ecology, 42(3):416-426.


2001 | Almeida, M. A., Cunha, M. A., Alcântara, F. Loss of estuarine bacteria by viral infection and predation in microcosm conditions. Microbial Ecology, 42(4):562-571.


2001 | Almeida, M. A., Cunha, M. A., Alcântara, F. Physiological responses of marine and brackish water bacterial assemblages in a tidal estuary (Ria de Aveiro, Portugal). Aquatic Microbial Ecology, 25:113-125.


2001 | Cunha, M. A., Almeida, M. A., Alcântara, F. Short-time responses of the natural planktonic bacterial community to the changing water properties in an estuarine environment: ectoenzymatic activity, glucose incorporation and biomass production. Microbial Ecology 42(1):69-79.


2000 | Cunha, M. A., Almeida, M. A., Alcântara, F. Patterns of ectoenzymatic and heterotrophic bacterial activities along a salinity gradient in a shallow tidal estuary. Marine Ecology Progress Series, 204:1-12.


1999 | Cunha, M. A., Almeida, M. A., Alcântara, F. Compartments of oxygen consumption in a tidal mesotrophic estuary. Acta Oecologica, 20(4):227-235.

Awards

IMAR – Luiz Saldanha Award' 2002 granted to the research article “Cunha, M. A., Almeida, M. A. and Alcântara, F. (2001). Short-time responses of the natural planktonic bacterial community to the changing water properties in an estuarine environment: ectoenzymatic activity, glucose incorporation and biomass production. Microbial Ecology 42(1):69-79”


Prémio Clube Usuários SPME 2011 - Prémio para o melhor trabalho em SPME (2ª Edição) para o trabalho Salvador, A., Baptista, I., Barrosa, A.S., Gomes, N, Cunha, A., Almeida, A., Rocha S. M. (2011) Can volatile organic metabolites be used to simultaneously assess microbial and mite contamination level of cereal grains and coffee beans?  


2011 | Rocha, S. M., Costa, V.; Ferreira, J.; Almeida, A.; Cunha, A.; Gomes, N.; Stein, P.; Petronilho, S.; Baptista, I. "Equipamento e processo de extracção por fluxo de contaminantes biológicos e químicos". Patente de invenção nacional n.º 105390, Data do pedido provisório: 22-11-2010. Data do pedido de conversão em pedido dedifinitivo: 18-11-2011.


2010 | Rocha, S. M.; Costa, V.; Ferreira, J.; Almeida, A.; Cunha, A.; Gomes, N.; Stein, P.; Petronilho, S.; Baptista, I. "Equipment and flow extraction process of biological and chemical contaminants". International Patent: PCT (PT-PPI 42961-10), Data do pedido provisório: 10-12-2010.


2007 | Carvalho, B.M.B., Costa, L., Alves, E., Almeida, M.A.P., Cunha, M.A.S.D.A., Cunha, Tomé, J.P.C., Faustino, M.A.F., Neves, M.G.P.M.S., Tome, A.C., Cavaleiro, J.A.S., Lin, Z., Rainho, J.P. Materiais híbridos nanomagnete-porfirina, processo para a síntese e respectiva aplicação em desinfecção de águas. Patente de invenção nacional n.º 103828, 21-09-2007.

Present research activities

Light-bacteria interactions:  photodynamic inactivation of bacteria, fungi and microbial biofilms.
Biosurfactants application for the control of microbial biofilms.
Microbial consortia of hydrocarbons degraders and biosurfactants producers.
Bioremediation of organic pluentes.
Bacterial communities of deep ocean sediments.
Appication of plant-growth promoting rhizobacteria in the mitigation of stress of crop-cultivated halophytes.

Research interests

Environmental microbiology: ecology of bacterial communities in aquatic environments, with special interest in marine water and sediments.


Plant-bacteria interactions in the rhizosphere and endosphere of salt marsh halophytes.


Microbial processes of production, processing and mineralization of organic matter. Bacterial communities in sediments: methane formation and sulfate reduction.


Interactions between microorganisms and hydrocarbons bioremediation and bioprospecting. Bacterial biodegradation of pollutants and microbe enhanced phytorremediation.


Interactions light-organisms and photodynamic inactivation of microorganisms and microbial biofilms.

Professional Career

Undergraduate Teaching Assistant – Department of Biology, University of Aveiro (1987-1988).


Teaching Assistant (Junior) - Department of Biology, University of Aveiro (1989-1994).


 Teaching Assistant (Senior) - Department of Biology, University of Aveiro (1994-2001).


 Assistant Professor – Department of Biology, University of Aveiro (2001-).

Academic degrees

Diploma in Biology, University of Aveiro (1988)
Diploma of Pedagogic Competence and Scientific Capacity (Equivalent to MSc. Diploma), University of Aveiro (1994)
PhD in Biology, University of Aveiro (2001)

Scientific Supervision

In progress
Concluded

Projects

In progress
  • RhizoMiS - Redesigning the rhizosphere microbiome of Salicornia for exploitation of bioproducts and improvement of bioprocesses See more
  • AquaHeal: Microbial modulation in aquacultures with recirculation system: towards a production system suppressor of diseases See more
  • EcoTech-SPONGE- Assessing the ecological functions and potential biotechnological applications of plasmid assemblages from microbial symbionts of marine sponges See more
Concluded
  • FRESHMEAT-AP - Carne fresca com prazo de validade alargado e maior segurança microbiológica recorrendo à tecnologia de Altas Pressões (AP) See more
  • Impact of solar radiation on dissolved organic matter photochemical and microbial processes in the estuarine environment See more
  • PTDC/CPE-CED/117516/2010 A study of academic development in universities through innovative approaches in teaching, assessment and feedback. See more
  • Rapid methods for the testing of tetrapyrrolic derivatives as photosensitizers for photodynamic antimicrobial therapy See more
  • Desenvolvimento de Novas Tecnologias de Suporte à Criação de Produtos Inovadores (NOVELTEC) See more
  • Phage therapy - a new technology to depurate shellfish - Depurofago See more
  • AQUASAFE - Development of new technologies to anticipate and diagnose disease outbreaks in aquaculture See more
  • RASTREMAR - Use of molecular tools in the traceability of marine food products See more
  • Phage therapy as a low environmental impact alternative to inactive phatogenic bacteria in fishfarming plants. See more
  • Global climate change and pollution: a synergy designed for disaster? See more
  • SWIMGLO - The Gloria-SWIM plate boundary Faults connection and its importance on the propagation of tectonic deformation and deep See more
  • Desenvolvimento de um equipamento de medição do nível/grau de higienização e fúngico de produtos alimentares e de embalagem – MicroMed. See more
  • MARMER: The role of salt marsh plants on mercury cycle. Identifying plant-bacteria-Hg interactions critical for ecosystem remediation See more
  • Dynamics of cyanobacteria and cyanotoxins in the Guadiana estuary - DYNCYANO See more

Publications

WoS Papers (147)
Almeida M.A., Cunha M.A., Alcântara F. (2005) Relationship of bacterioplankton production with primary production and respiration in a shallow estuarine system (Ria de Aveiro, NW Portugal). In: Academic degrees. Microbiological Research. 3, 160, 315-328.
Cunha M.A., Pedro R., Almeida A., Silva H. (2005) Activity and growth efficiency of heterotrophic bacteria in a salt marsh (Ria de Aveiro, Portugal). In: Academic degrees. Microbiological Research. 3, 160, 279-290.
Henriques I ., Almeida A., Cunha A., Correia A. (2004) Molecular sequence analysis of prokariotic diversity in the micdle and outer sections of the Portuguese estuary Ria de Aveiro. In: Academic degrees. Fems Microbiology Ecology. 49, 269-279.
Yamasaki A., Cunha M.A., Oliveira J.A.B.P., Duarte A.C., Gomes M.T.S.R. (2004) Assessment of copper toxicity using an acoustic wave sensor. In: Academic degrees. Biosensors And Bioelectronics. 19, 1203-1208.
Henriques I., Alves A., Tacão M., Almeida A., Cunha A., Correia A. (2006) Genetic diversity and dynamics of free-living bacterial community along an estuarine gradient (Ria de Aveiro, Portugal). In: Academic degrees. Estuarine Coastal And Shelf Science . 68, 139-148.
Cunha M.A., Dias J.M., Adelaide M.A., Lopes J.F., Alcântara F. (2003) Fluxes of bacterioplankton between a tidal estuary and the sea: returning to the “outwelling hypothesis". In: Academic degrees. Aquatic Ecology. 37, 45-54.
Cunha A., Almeida A., Ré A., Martins A., Alcântara F. (2006) Perylene toxicity in the estuarine environment of Ria de Aveiro (Portugal). In: Academic degrees. Ecotoxicology. 2, 15, 171-185.
Almeida M.A., Cunha M.A., Dias J. (2007) Bacterial productivity distribution during a rainy year in an estuarine system. In: Academic degrees. Microb Ecol. 53, 208–220
Cunha A., Almeida A. (2006) Influence of an estuarine plume and a marine sewage outfall on the dynamics of coastal bacterioplankton communities. In: Academic degrees. Aquatic Microbial Ecology. 44, 253-262.
Almeida M. A., Cunha M. A., Alcântara F. (2001) Physiological responses of marine and brackish water bacterial assemblages in a tidal estuary (Ria de Aveiro, Portugal). Aquat Microb Ecol 25:113-125. In: Academic degrees. Aquat Microb Ecol . 25, 113-125.
Almeida M.A., Cunha M.A., Alcântara F. (2001) Factors influencing bacterial production in a shallow estuarine system. In: Academic degrees. Micro Ecol . 3, 42, 416-426.
Almeida M.A., Cunha M.A., Alcântara F. (2001) Loss of estuarine bacteria by viral infection and predation in microcosm conditions. In: Academic degrees. Microb Ecol . 4, 42, 562-571.
Almeida M.A., Cunha M.A., Alcântara F. (2002) Seasonal change in the proportion of bacterial and phytoplankton production along a salinity gradient in a shallow estuary. In: Academic degrees. Hydrobiologia. 475/476, 251-262.
Santos L., Cunha M .A., Silva H., Caçador I., Dias J.M., Almeida M.A . (2007) Influence of salt marsh on the bacterial activity in two estuaries with different hydrodinamic characteristics (Ria de Aveiro and Tagus Estuary). In: Academic degrees. Fems Microbiol Ecol. 60, 3, 429-441.
Cunha M.A., Almeida M.A., Alcântara F. (1999) Compartments of oxygen consumption in a tidal mesotrophic estuary. In: Academic degrees. Acta Oecologica. 4, 20, 227-235.
Cunha M.A., Almeida M.A., Alcântara F. (2000) Patterns of ectoenzymatic and heterotrophic bacterial activities along a salinity gradient in a shallow tidal estuary. In: Academic degrees. Marine Ecology Progress Series. 204, 1-Dec.
Cunha M.A., Almeida M.A., Alcântara F. (2001) Short-time responses of the natural planktonic bacterial community to the changing water properties in an estuarine environment: ectoenzymatic activity, glucose incorporation and biomass production. In: Academic degrees. Microbial Ecology. 1, 41, 69-79.
Cunha M.A., Almeida M.A., Alcântara F. (2003) Ectoenzymatic activity and glucose heterotrophic metabolism in a shallow estuary (Ria de Aveiro, Portugal): influence of bed sediments and salt marshes. In: Academic degrees. Acta Oecologica. 24, S97-S107.
Almeida M.A., Cunha M.A., Alcântara F. (2002) Is bacterioplankton production on the Ria de Aveiro influenced by of salt marshes and bed sediment?. In: Academic degrees. Aquatic Ecology. 36, 4, 469-482.
Queiroga H., Cunha M.R., Cunha A., Moreira M.H., Quintino V., Rodrigues A.M., Serôdio J., Warwick J. (2006) Foreword. In: Academic degrees. Hydrobiologia. 555, IX-IX.
Almeida A., Cunha MA, Sobral P, Fernandes S, Alcântara F (2007) Copper effects on bacterial activity of estuarine silty sediments. In: Academic degrees. Estuar Coast Shelf S. 73, 3-4, 743-752.
Carvalho C., Gomes A., Fernandes S., Prata A., Almeida M. A., Cunha M.A., Tomé J., Faustino M. A., Neves M. G., Tomé A., Cavaleiro J. A., Lin Z., Rainho J., Rocha J. (2007) Photoinactivation of bacteria in wastewater by porphyrins: Bacterial -galactosidase activity and leucine-uptake as methods to monitor the process. In: Academic degrees. Journal Of Photochemistry And Photobiology B: Biology. 88, 112–118
Costa L., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Almeida A. (2010) Sewage bacteriophage inactivation by cationic porphyrins: influence of light parameters. In: Academic degrees. Photochemical And Photobiological Sciences. 9, 8, 1126-1133.
Costa L., Alves E., Carvalho C. M. B., Tomé J. P. C., Faustino M .A. F., Neves M. G. P. S., Tomé A .C., Cavaleiro J .A. S., Cunha A., Almeida A. (2008) Sewage bacteriophage photoinactivation by cationic porphyrins: a study of charge effect. In: Academic degrees. Photochemical & Photobiological Sciences. 7, 4, 415 – 422
Alves E., Carvalho C. M. B., Tomé J. P. C., Faustino M. A. F., Neves M .G .P. S., Tomé A. C., Cavaleiro J. A. S., Cunha Â., Mendo S., Almeida A. (2008) Photodynamic inactivation of recombinant bioluminescent Escherichia coli by cationic porphyrins under artificial and solar irradiation. In: Academic degrees. Journal Of Industrial Microbiology And Biotechnology. 35, 11, 1447-1454.
Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Costa L., Alves E., Oliveira A., Cunha Â., Almeida A. (2009) Antimicrobial photodynamic activity of porphyrin derivatives: potential application on medical and water disinfection. In: Academic degrees. Journal Of Porphyrins & Phthalocyanines. 13, 5, 575-577.
Oliveira A., Almeida A., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A. (2009) Porphyrin derivatives as photosensitizers for the inactivation of Bacillus cereus endospores. In: Academic degrees. Journal Of Applied Microbiology. 106, 1986–1995
Cunha A., Almeida A. (2009) Inorganic nutrient regulation of bacterioplankton heterotrophic activity in an estuarine system (Ria de Aveiro, Portugal). In: Academic degrees. Hydrobiologia. 628, 1, 81-93.
Alves E., Costa L., Carvalho C. M. B., Tomé J. P. C., Faustino M. A. F., Neves M. G. P. S., Tomé A. C., Cavaleiro J. A. S., Cunha A., Almeida A. (2009) Charge effect on the photoinactivation of Gram-negative and Gram-positive bacteria by cationic porphyrins. In: Academic degrees. Bmc Microbiology . 9, 1, 70
Almeida A., Cunha Â., Gomes N.C.M., Alves E., Costa L., Faustino M.A.F. (2009) Phage therapy and photodynamic therapy: low environmental impact approaches to inactivate microorganisms in fish farming plants. In: Academic degrees. Marine Drugs. 7, 268-313.
Santos A.L., Mendes C., Gomes N.C.M., Henriques I., Correia A., Almeida A., Cunha A. (2009) Short-term variability of abundance, diversity and activity of estuarine bacterioneuston and bacterioplankton. In: Academic degrees. Journal Of Plankton Research. 31, 12, 1545-1555.
Lopes A. R., Azeiteiro U., Bessa V.S., Pereira C., Salvador S., Almeida A., Pereira M.J. (2009) Spring pelagic communties of phytoplankton, cyanobacteria, associated heterotrophic bacteria and viruse in an eutrophic shallow temperate lake. In: Academic degrees. Fresenius Environmental Bulletin. 18, 5b, 875-884.
Tavares A., Carvalho C.M.B., Faustino M.A., Neves M.G.P.M.S., Tomé J.P.C., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Alves E., Almeida A. (2010) Antimicrobial Photodynamic Therapy: Study of Bacterial Recovery Viability and Potential Development of Resistance after Treatment. In: Academic degrees. Marine Drugs. 8, 1, 91-105.
Cruz A., Oliveira V., Baptista I., Almeida A., Cunha A., Suzuki S., Mendo S. (2012) Effect of tributyltin (TBT) in the metabolic activity of TBT-resistant and sensitive estuarine bacteria. In: Academic degrees. Environmental Toxicology. 27, 1, 11-17.
Carvalho C.M.B., Alves E., Costa L., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Almeida A., Cunha A., Lin Z., Rocha J. (2010) Functional Cationic Nanomagnet-Porphyrin Hybrids for the Photoinactivation of Microorganisms. In: Academic degrees. Acs Nano. 4, 12, 7133–7140
Gomes N.C.M., Cleary D.F.R., Pinto F.N., Egas C., Almeida A., Cunha A., Mendonca-Hagler L.C.S., Smalla K. (2010) Taking Root: Enduring Effect of Rhizosphere Bacterial Colonization in Mangroves. In: Academic degrees. Plos One. 5, 11,
Santos A.L., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2011) Effects of ultraviolet radiation on the abundance, diversity and activity of bacterioneuston and bacterioplankton: insights from microcosm studies. In: Academic degrees. Aquatic Sciences - Research Across Boundaries. 73, 1, 63-77.
Santos A.L., Lopes S., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2011) Diversity in UV-Sensitivity and Recovery Potential among Bacterioneuston and Bacterioplankton Isolates. In: Academic degrees. Letters In Applied Microbiology. 52, 4, 360-366.
Pereira C., Salvador S., Arrojado C., Silva Y.J., Santos A.L., Cunha A., Gomes N.C.M., Almeida A. (2011) Evaluating seasonal dynamics of bacterial communities in marine fish aquaculture: a preliminary study before applying phage therapy. In: Academic degrees. Journal Of Environmental Monitoring. 13, 4, 1053-1058.
Oliveira J., Cunha A., Castilho F., Romalde J.A.L., Pereira M.J. (2011) Microbial contamination and purification of bivalve shellfish: Crucial aspects in monitoring and future perspectives – A minireview. In: Academic degrees. Food Control. 22, 805-816.
Baptista I., Santos A.L., Cunha A., Gomes N.C.M., Almeida A. (2011) Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation. In: Academic degrees. Aquatic Microbial Ecology. 62, 3, 299-310.
Baptista I., Santos A.L., Cunha A., Gomes N.C.M., Almeida A. (2011) Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation. In: Academic degrees. Aquatic Microbial Ecology. 62, 3, 299-310.
Coelho F.J.R.C., Sousa S., Santos L., Santos A.L., Almeida A., Gomes N.C.M., Cunha A. (2011) Exploring hydrocarbonoclastic bacterial ­communities in the estuarine surface microlayer. In: Academic degrees. Aquatic Microbial Ecology. 64, 185-195.
Alves E., Faustino M.A.F., Tome J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Almeida A. (2011) Photodynamic antimicrobial chemotherapy in aquaculture: photoinactivation studies of Vibrio fischeri. In: Academic degrees. Plos One. 6, 6, e20970
Oliveira V., Santos A.L., Coelho F., Gomes N.C.M., Silva H., Almeida A., Cunha A. (2010) Effects of monospecific banks of salt marsh vegetationon sediment bacterial communities. In: Academic degrees. Microbial Ecology. 60, 1, 167–179
Santos L.M.P., Santos A.L., Coelho F.J.R.C., Gomes N.C.M., Dias J.M., Cunha A., Almeida A. (2011) Relation between bacterial activity in the surface microlayer and estuarine hydrodynamics. In: Academic degrees. Fems Microbiology Ecology. 77, 3, 636-646.
Costa L., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C, Cavaleiro J.A.S., Faustino M.A.F., Cunha A., Gomes N.C.M., Almeida A. (2011) Evaluation of resistance development and viability recovery by a non-enveloped virus after repeated cycles of aPDT. In: Academic degrees. Antiviral Research. 91, 3, 278-282.
Tavares A., Carvalho C.M.B., Faustino M.A., Neves M.G.P.M.S., Tomé J.P., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Alves E., Almeida A. (2011) Mechanisms of Photoinactivation of Gram-negative recombinant bioluminescent bacteria by cationic porphyrins. In: Academic degrees. Photochemical & Photobiological Sciences. 10, 10, 1659-1669.
Arrojado C., Tavares C., Pereira C., Tomé J. P. C., Faustino M.A.F., Neves M.G.P., Tomé A.C., Cavaleiro J.A.S., Calado R., Cunha A., Gomes N.C.M., Almeida A. (2011) Applicability of photodynamic antimicrobial chemotherapy as an alternative to inactivate fish pathogenic bacteria in aquaculture systems. In: Academic degrees. Photochemical & Photobiological Sciences. 10, 10, 1691-1700.
Gomes M.C., Woranovicz-Barreira S.M., Tomé J.P.C., Faustino M.A.F., Cavaleiro J.A.S., Gomes N.C.M., Almeida A., Cunha A. (2011) Photodynamic inactivation of Penicillium chrysogenum conidia by cationic porphyrins. In: Academic degrees. Photochemical & Photobiological Sciences. 10, 11, 1735-1743.
Alves E., Costa L., Cunha Â., Faustino M.A.F., Neves M.G.P.M.S., Almeida A. (2011) Bioluminescence and its application in the monitoring of antimicrobial photodynamic therapy. In: Academic degrees. Applied Microbiology And Biotechnology. 92, 6, 1115-1128.
Pereira C., Silva Y., Santos A.L., Gomes N.C.M., Cunha A., Almeida A. (2011) Bacteriophages with potential for inactivation of fish pathogenic bacteria: survival, host specificity and effect on bacterial community structure. In: Academic degrees. Marine Drugs. 9, 11, 2236-2255.
Prata C., Ribeiro A., Cunha A., Gomes N.C.M., Almeida A. (2012) Ultracentrifugation as a direct method to concentrate viruses in environmental waters: virus-like particles enumeration as a new approach to determine the efficiency of recovery. In: Academic degrees. Journal Of Environmental Monitoring. 14, 1, 64-70.
Cleary D.F.R., Oliveira V., Gomes N.C.M., Pereira A. , Henriques I., Marques B., Almeida A., Cunha A., Correia A., Lillebø A.I. (2012) Impact of sampling depth and plant species on local environmental conditions, microbiological parameters and bacterial composition in a mercury contaminated salt marsh. In: Academic degrees. Marine Pollution Bulletin. 64, 2, 263-271.
Louvado A., Coelho F.J.R.C., Domingues P., Gomes NCM, Santos A.L., Almeida A., Cunha A . (2012) Isolation of Surfactant-Resistant Pseudomonads from the Estuarine Surface Microlayer. In: Academic degrees. Journal Of Microbiology And Biotechnology. 22, 3, 283–291
Oliveira V., Santos A.L., Aguiar C., Santos L., Salvador A.C., Gomes N.C.M., Silva H., Rocha S.M., Almeida A., Cunha A. (2012) Prokaryotes in salt marsh sediments of Ria de Aveiro: effects of halophyte vegetation on abundance and diversity. In: Academic degrees. Estuarine, Coastal And Shelf Science. 110, 61-68.
Pereira J., Carvalho E., Faustino M., Fernandes R., Neves G., Cavaleiro J., Gomes N.C.M., Cunha A., Almeida A., Tomé J. (2012) Phthalocyanine thio-pyridinium derivatives as antibacterial photosensitizers. In: Academic degrees. Photochemistry And Photobiology . 88, 3, 537-547.
Santos A.L., Oliveira V., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2012) Effects of UV-B Radiation on the Structural and Physiological Diversity of Bacterioneuston and Bacterioplankton. In: Academic degrees. Applied And Environmental Microbiology. 78, 6, 2066-2069.
Santos A.L., Lopes S., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia, A., Cunha A.L. (2012) The UV Responses of Bacterioneuston and Bacterioplankton Isolates Depend on the Physiological Condition and Involve a Metabolic Shift. In: Academic degrees. Fems Microbiology Ecology. 80, 3, 646-658.
Nogueira V., Lopes I., Rocha-Santos T., Santos A.L., Rasteiro G.M., Antunes F., Gonçalves F., Soares A.M.V.M., Cunha A., Almeida A., Gomes N.C.M., Pereira R. (2012) Impact of organic and inorganic nanomaterials in the soil microbial community structure. In: Academic degrees. Science Of The Total Environment. 424, 344-350.
Pires A.C.C., Cleary D.F.R., Almeida A., Cunha A., Dealtry S., Mendonca-Hagler L.C.S., Smalla K., Gomes N.C.M. (2012) Denaturing Gradient Gel Electrophoresis and Barcoded Pyrosequencing Reveal Unprecedented Archaeal Diversity in Mangrove Sediment and Rhizosphere Samples. In: Academic degrees. Applied And Environmental Microbiology. 78, 16, 5520-5528.
Costa L., Faustino A., Faustino M.A.F., Cunha A., Neves M.G.P.M.S., Cunha A., Almeida A. (2012) Photodynamic Inactivation of Mammalian Viruses and Bacteriophages. In: Academic degrees. Viruses. 4, 7, 1034-1074.
Vieira A., Yolanda S., Cunha A., Gomes N.C.M., Ackermann H., Almeida A. (2012) Phage therapy to control multidrug-resistant Pseudomonas aeruginosa skin infections: in vitro and ex vivo experiments. In: Academic degrees. European Journal Of Clinical Microbiology & Infectious Diseases. 31, 11, 3241-3249.
Oliveira J.M., Cunha A.S., Almeida A.P., Castilho F.B., Pereira M.J. (2013) Comparison of Methodologies for the Extraction of Bacterial DNA from Mussels-Relevance for Food Safety. In: Academic degrees. Food Analytical Methods. 6, 1, 201-209.
Domingues P.M., Louvado A., Oliveira V., Coelho F.J., Almeida A., Gomes N.C.M., Cunha A. (2013) Selective cultures for the isolation of biosurfactant producing bacteria: comparison of environmental inocula and hydrophobic carbon sources. In: Academic degrees. Preparative Biochemistry & Biotechnology. 43, 3, 237-55.
Silva R., Tomé A., Tomé J., Neves M.G., Faustino M.A., Cavaleiro J.A., Oliveira A., Almeida A., Cunha A. (2012) Photo-inactivation of Bacillus endospores: inter-specific variability of inactivation efficiency. In: Academic degrees. Microbiology And Immunology. 56, 10, 692-699.
Costa L., Tomé J.P.C., Neves M.G.P.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Faustino M.A.F., Almeida A. (2012) Susceptibility of non-enveloped DNA- and RNA-type viruses to photodynamic inactivation. In: Academic degrees. Photochemical & Photobiological Sciences. 11, 10, 1520-1523.
Costa D.C.S., Gomes M.C., Faustino M.A.F., Neves M.G.P.M.S., Cunha A., Cavaleiro J.A.S., Almeida A., Tomé J.P.C. (2012) Comparative photodynamic inactivation of antibiotic resistant bacteria by first and second generation cationic photosensitizers. In: Academic degrees. Photochemical & Photobiological Sciences . 11, 12, 1905-1913.
Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2012) Contribution of reactive oxygen species to UV-B-induced damage in bacteria. In: Academic degrees. Journal Of Photochemistry And Photobiology B: Biology. 117, 40-46.
Gomes M.C., Silva S., Faustino M.A.F., Neves M.G.P.M.S., Almeida A., Cavaleiro J.A.S., Tomé J.P.C., Cunha A. (2013) Cationic galactoporphyrin photosensitisers against UV-B resistant bacteria: oxidation of lipids and proteins by 1O2. In: Academic degrees. Photochemical & Photobiological Sciences. 12, 262–271
Santos A.L., Oliveira V., Baptista I., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2013) Wavelength Dependence of Biological Damage Induced by UV Radiation on Bacteria. In: Academic degrees. Archives Of Microbiology. 195, 1, 63-74.
Costa L., Faustino M.A.F. , Tomé J.P.C., Neves M.G.P.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Almeida A. (2013) Involvement of type I and type II mechanisms on the photoinactivation of non-enveloped DNA and RNA bacteriophages. In: Academic degrees. Journal Of Photochemistry And Photobiology B: Biology. 120,
Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2013) Role of Transition Metals in UV-B Induced Damage to Bacteria. In: Academic degrees. Photochemistry And Photobiology. 89, 3, 640-648.
Santos A.L., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha A. (2013) Growth conditions influence UVB sensitivity and oxidative damage in an estuarine bacterial isolate. In: Academic degrees. Photochemical & Photobiological Sciences. 12, 974-986.
Salvador A., Baptista I., Barros A., Gomes N.C.M., Cunha A., Almeida A., Rocha S.M. (2013) Can volatile organic metabolites be used to simultaneously assess microbial and mite contamination level in cereal grains and coffee beans?. In: Academic degrees. Plosone. 8, 4, e59338
Alves E., Esteves A.C., Correia A., Cunha A., Faustino M.A.F., Neves M.G.P.M.S., Almeida A. (2015) Protein profiles of Escherichia coli and Staphylococcus warneri are altered by photosensitization with cationic porphyrins. In: Academic degrees. Photochemical & Photobiological Sciences. 14, 6, 1169-1178.
Coelho F.J.R.C., Rocha R.J.M., Pires A.C.C., Ladeiro B., Castanheira J.M., Costa R., Almeida A., Cunha A., Lillebo A.I., Ribeiro R., Pereira R., Lopes I., Marques C., Moreira-Santos M., Calado R., Cleary D.F.R., Gomes N.C.M. (2013) Development and validation of an experimental life support system for assessing the effects of global climate change and environmental contamination on estuarine and coastal marine benthic communities. In: Academic degrees. Global Change Biology. 19, 8, 2584-2595.
Alves E., Faustino M. A. F., Tomé J .P.C., Neves M. G. P. S., Tomé A. C., Cavaleiro J. A. S., Cunha A., Newton G., Almeida A. (2013) Nucleic acid changes during photodynamic inactivation of bacteria by cationic porphyrins. In: Academic degrees. Bioorganic & Medicinal Chemistry. 21, 14, 4311-4318.
Alves E., Melo T., Simões C., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Cavaleiro J.A.S. , Cunha Â., Gomes N.C.M., Domingues P., Domingues M.R.M., Almeida A. (2013) Photodynamic oxidation of Staphylococcus warneri membrane phospholipids: new insights based on lipidomics. In: Academic degrees. Rapid Communications In Mass Spectrometry. 27, 14, 1607-1618.
Santos A.L., Moreirinha C., Lopes D., Esteves A.C., Henriques I., Almeida A., Domingues M.R.M., Delgadillo I., Correia A., Cunha A. (2013) Effects of UV Radiation on the Lipids and Proteins of Bacteria Studied by Mid-Infrared Spectroscopy. In: Academic degrees. Environmental Science & Technology. 47, 12, 6306-6315.
Ribeiro A., Ramalheira E. , Cunha A., Gomes N.C.M., Almeida A. (2013) Incidence of Rotavirus and Adenovirus: Detection by Molecular and mmunological Methods in Human Faeces. In: Academic degrees. Journal Of Pure And Applied Microbiology. 7, 3,
Mendes C., Santos L., Cunha A., Gomes N.C.M., Almeida A. (2014) Proportion of prokaryotes enumerated as viruses by epifluorescence microscopy. In: Academic degrees. Annals Of Microbiology. 64, 2, 773-778.
Silva Y.J., Costa L., Pereira C., Cunha A., Calado R., Gomes N.C.M., Almeida A. (2014) Influence of environmental variables in the efficiency of phage therapy in aquaculture. In: Academic degrees. Microbial Biotechnology. 7, 5, 401-413.
Alves E., Santos N., Melo T., Maciel E., Dória L., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A., Helguero L., Domingues P., Almeida A., Domingues M.R.M. (2013) Photodynamic oxidation of Escherichia coli membrane phospholipids: new insights based on lipidomics. In: Academic degrees. Rapid Communications In Mass Spectrometry. 27, 23, 2717-2728.
Santos A.L., Baptista I., Gomes N.C.M., Henriques I., Almeida A., Correia A., Cunha Â. (2014) Contribution of chemical water properties to the differential responses of bacterioneuston and bacterioplankton to ultraviolet-B radiation. In: Academic degrees. Fems Microbiology Ecology. 87, 2, 517-535.
Silva Y.J., Manco S., Costa R., Rodrigues V., Dias J., Ferreira H., Pousao-Ferreira P., Almeida A., Cunha A., Calado R., Gomes N.C.M. (2015) Effect of different culture conditions on the structural diversity of prokaryote communities in the sediment of earth ponds stocked with gilthead seabream Sparus aurata (Linnaeus, 1758). In: Academic degrees. Aquaculture Research. 46, 7, 1760-1769.
Alves E., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Cunha A., Almeida A. (2014) An insight on bacterial cellular targets of photodynamic inactivation. In: Academic degrees. Future Medicinal Chemistry. 6, 2, 141-164.
Gomes N.C.M., Cleary D.F.R., Pires A.C.C., Almeida A., Cunha A., Mendonca-Hagler L.C.S., Smalla K. (2014) Assessing variation in bacterial, composition between the rhizospheres of two mangrove tree species. In: Academic degrees. Estuarine Coastal And Shelf Science. 139, 40-45.
Santos L., Santos A.L., Coelho F.J.R.C., Gomes N.C.M., Dias J.M., Cunha A., Almeida A. (2014) Heterotrophic activities of neustonic and planktonic bacterial communities in an estuarine environment (Ria de Aveiro). In: Academic degrees. Journal Of Plankton Research. 36, 1, 230-242.
Mateus C., Costa C., Silva Y., Cunha A., Almeida A. (2014) Efficiency of phage cocktails in the inactivation of Vibrio in aquaculture. In: Academic degrees. Aquaculture. 424, 167-173.
Mesquita M., Menezes J., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S. , Cunha Â., Almeida A., Hackbarth S., Röder B., Faustino M.A.F. (2014) Photodynamic inactivation of bioluminescent Escherichia coli by neutral and cationic pyrrolidine-fused chlorins and isobacteriochlorins. In: Academic degrees. Bioorganic & Medicinal Chemistry Letters. 24, 3, 808-812.
Almeida J., Tome J.P.C., Neves M.G.P.M.S., Tome A.C., Cavaleiro J.A.S., Cunha A., Costa L., Faustino M.A.F., Almeida A. (2014) Photodynamic inactivation of multidrug-resistant bacteria in hospital wastewaters: influence of residual antibiotics. In: Academic degrees. Photochemical & Photobiological Sciences. 13, 4, 626-633.
Pereira M.A., Faustino M.A.F., Tome J.P.C., Neves M.G.P.M.S., Tome A.C., Cavaleiro J.A.S., Cunha A., Almeida A. (2014) Influence of external bacterial structures on the efficiency of photodynamic inactivation by a cationic porphyrin. In: Academic degrees. Photochemical & Photobiological Sciences. 13, 4, 680-690.
Gomes M.C., Fernandes R., Cunha A., Tome J.P., Trindade T. (2013) Fluorescence biolabeling using methylated silica nanoparticles containing a lanthanide complex. In: Academic degrees. Journal Of Materials Chemistry B. 1, 40, 5429-5435.
Oliveira J., Cunha A., Castilho F., Romalde J.L., Pereira M.J. (2011) Microbial contamination and purification of bivalve shellfish: Crucial aspects in monitoring and future perspectives - A mini-review. In: Academic degrees. Food Control. Jun, 22, -805.
Oliveira V., Gomes N.C.M., Almeida A., Silva A.M.S., Simoes M.M.Q., Smalla K., Cunha A. (2014) Hydrocarbon contamination and plant species determine the phylogenetic and functional diversity of endophytic degrading bacteria. In: Academic degrees. Molecular Ecology. 23, 6, 1392-1404.
Santos L., Vaz L., Gomes N.C.M., Vaz N., Dias J.M., Cunha A., Almeida A. (2014) Impact of freshwater inflow on bacterial abundance and activity in the estuarine system Ria de Aveiro. In: Academic degrees. Estuarine Coastal And Shelf Science. 138, 107-120.
Mesquita M.Q., Menezes J.C.J.M.D.S., Pires S.M.G., Neves M.G.P.M.S., Simoes M.M.Q., Tomee A.C., Cavaleiro J.A.S., Cunha A., Daniel-Da-Silva A.L., Almeida A., Faustino M.A.F. (2014) Pyrrolidine-fused chlorin photosensitizer immobilized on solid supports for the photoinactivation of Gram negative bacteria. In: Academic degrees. Dyes And Pigments. 110, 123-133.
Oliveira J.M., Cunha A.S., Almeida A.P., Castilho F.B., Pereira M.J. (2013) Comparison of Methodologies for the Extraction of Bacterial DNA from Mussels-Relevance for Food Safety. In: Academic degrees. Food Analytical Methods. 2013, 6, -201.
Alves E., Rodrigues J.M.M., Faustino M.A.F., Neves M.G.P.M.S., Cavaleiro J.A.S., Lin Z., Cunha A., Nadais M.H., Tome J.P.C., Almeida A. (2014) A new insight on nanomagnet-porphyrin hybrids for photodynamic inactivation of microorganisms. In: Academic degrees. Dyes And Pigments. 110, 80-88.
Santos L., Santos E.B.H., Dias J.M., Cunha A., Almeida A. (2014) Photochemical and microbial alterations of DOM spectroscopic properties in the estuarine system Ria de Aveiro. In: Academic degrees. Photochemical & Photobiological Sciences. 13, 8, 1146-1159.
Baptista I., Santos A.L., Pereira C., Santos L., Cunha A., Gomes N.C.M., Almeida A. (2014) Influence of incubation conditions on bacterial production estimates in an estuarine system. In: Academic degrees. Aquatic Ecology. 48, 3, 327-336.
Oliveira J., Castilho F., Cunha A., Pereira M.J. (2012) Bacteriophage therapy as a bacterial control strategy in aquaculture. In: Academic degrees. Aquaculture International. 2012, 20, -879.
Oliveira V., Gomes N.C.M., Almeida A., Silva A.M.S., Silva H., Cunha A. (2015) Microbe-Assisted Phytoremediation of Hydrocarbons in Estuarine Environments. In: Academic degrees. Microbial Ecology. 69, 1, 1-12.
Lopes D., Melo T., Santos N., Rosa L., Alves E., Gomes M.C., Cunha A., Neves M.G.P.M.S., Faustino M.A.F., Domingues M.R.M., Almeida A. (2014) Evaluation of the interplay among the charge of porphyrinic photosensitizers, lipid oxidation and photoinactivation efficiency in Escherichia coli. In: Academic degrees. Journal Of Photochemistry And Photobiology B-biology. 141, 145-153.
Costa L., Esteves A.C., Correia A., Moreirinha C., Delgadillo I., Cunha A., Neves M.G.P.S., Faustino M.A.F., Almeida A. (2014) SDS-PAGE and IR spectroscopy to evaluate modifications in the viral protein profile induced by a cationic porphyrinic photosensitizer. In: Academic degrees. Journal Of Virological Methods. 209, 103-109.
Alves E., Faustino M.A.F., Neves M.G.P.M.S., Cunha A., Nadais H., Almeida A. (2015) Potential applications of porphyrins in photodynamic inactivation beyond the medical scope. In: Academic degrees. Journal Of Photochemistry And Photobiology C-photochemistry Reviews. 22, 34-57.
Beirao S., Fernandes S., Coelho J., Faustino M.A.F., Tome J.P.C., Neves M.G.P.M.S., Tome A.C., Almeida A., Cunha A. (2014) Photodynamic Inactivation of Bacterial and Yeast Biofilms With a Cationic Porphyrin. In: Academic degrees. Photochemistry And Photobiology. 90, 6, 1387-1396.
Oliveira V., Gomes N.C.M., Cleary D.F.R., Almeida A., Silva A.M.S., Simoes M.M.Q., Silva H., Cunha A. (2014) Halophyte plant colonization as a driver of the composition of bacterial communities in salt marshes chronically exposed to oil hydrocarbons. In: Academic degrees. Fems Microbiology Ecology. 90, 3, 647-662.
Baptista I., Queiros R.P., Cunha A., Rocha S.M., Saraiva J.A., Almeida A. (2015) Evaluation of resistance development and viability recovery by toxigenic and non-toxigenic Staphylococcus aureus strains after repeated cycles of high hydrostatic pressure. In: Academic degrees. Food Microbiology. 46, 515-520.
Silva Y.J., Costa L., Pereira C., Mateus C., Cunha A., Calado R., Gomes N.C.M., Pardo M.A., Hernandez I., Almeida A. (2014) Phage Therapy as an Approach to Prevent Vibrio anguillarum Infections in Fish Larvae Production. In: Academic degrees. Plos One. 9, 12,
Coelho F.J.R.C., Cleary D.F.R., Rocha R.J.M., Calado R., Castanheira J.M., Rocha S.M., Silva A.M.S., Simoes M.M.Q., Oliveira V., Lillebo A.I., Almeida A., Cunha A., Lopes I., Ribeiro R., Moreira-Santos M., Marques C.R., Costa R., Pereira R., Gomes N.C.M. (2015) Unraveling the interactive effects of climate change and oil contamination on laboratory-simulated estuarine benthic communities. In: Academic degrees. Global Change Biology. 21, 5, 1871-1886.
Pereira C., Santos L., Silva A.P., Silva Y.J., Cunha A., Romalde J.L., Nunes M.L., Almeida A. (2015) Seasonal variation of bacterial communities in shellfish harvesting waters: Preliminary study before applying phage therapy. In: Academic degrees. Marine Pollution Bulletin. 90, 1-2, 68-77.
Alves C., Duarte M., Ferreira M., Alves A., Almeida A., Cunha A. (2016) Air quality in a school with dampness and mould problems. In: Academic degrees. Air Quality Atmosphere And Health. 9, 2, 107-115.
Maia F., Silva A.P., Fernandes S., Cunha A., Almeida A., Tedim J., Zheludkevich M.L., Ferreira M.G.S. (2015) Incorporation of biocides in nanocapsules for protective coatings used in maritime applications. In: Academic degrees. Chemical Engineering Journal. 270, 150-157.
Oliveira J., Castilho F., Cunha A., Pereira M.J. (2013) BIVALVE HARVESTING AND PRODUCTION IN PORTUGAL: AN OVERVIEW. In: Academic degrees. Journal Of Shellfish Research. 32, 3, 911-924.
Ferreira M., Pereira S., Almeida A., Queiros R., Delgadillo I., Saraiva J., Cunha A. (2016) Effect of temperature and compression rates on high pressure inactivation of Listeria. In: Academic degrees. Acta Alimentaria. 45, 1, 61-68.
da Silva R.N., Tome A.C., Tome J.P.C., Neves M.G.P.M.S., Faustino M.A.F., Cavaleiro J.A.S., Oliveira A., Almeida A., Cunha A. (2012) Photo-inactivation of Bacillus endospores: inter-specific variability of inactivation efficiency. In: Academic degrees. Microbiology And Immunology. 56, 10, 692-699.
Matos M.R.A., Gomes M.T.S.R., Oliveira J.A.B.P., Alves E., Cunha M.A.S.D.A., Almeida A., Rudnitskaya A. (2015) Assessment of Transition Metals Toxicity in Environmental Matrices Using Potentiometric Electrodes: Inorganic Mercury(II) in the Seawater as a Case Study. In: Academic degrees. Electroanalysis. 27, 8, 1932-1938.
Baptista I., Queiros R.P., Cunha A., Saraiva J.A., Rocha S.M., Almeida A. (2015) Inactivation of enterotoxic and non-enterotoxic Staphylococcus aureus strains by high pressure treatments and evaluation of its impact on virulence factors. In: Academic degrees. Food Control. 57, 252-257.
Louvado A., Gomes N.C.M., Simoes M.M.Q., Almeida A., Cleary D.F.R., Cunha A. (2015) Polycyclic aromatic hydrocarbons in deep sea sediments: Microbe-pollutant interactions in a remote environment. In: Academic degrees. Science Of The Total Environment. 526, 312-328.
Lourenco L.M.O., Sousa A., Gomes M.C., Faustino M.A.F., Almeida A., Silva A.M.S., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A., Tome J.P.C. (2015) Inverted methoxypyridinium phthalocyanines for PDI of pathogenic bacteria. In: Academic degrees. Photochemical & Photobiological Sciences. 14, 10, 1853-1863.
Rocha D.M.G.C., Venkatramaiah N., Gomes M.C., Almeida A., Faustino M.A.F., Paz F.A.A., Cunha A., Tome J.P.C. (2015) Photodynamic inactivation of Escherichia coli with cationic ammonium Zn(II) phthalocyanines. In: Academic degrees. Photochemical & Photobiological Sciences. 14, 10, 1872-1879.
Ferreira M., Almeida A., Delgadillo I., Saraiva J., Cunha A. (2016) Susceptibility of Listeria monocytogenes to high pressure processing: A review. In: Academic degrees. Food Reviews International. 32, 4, 377-399.
Silva Y.J., Moreirinha C., Pereira C., Costa L., Rocha R.J.M., Cunha A., Gomes N.C.M., Calado R., Almeida A. (2016) Biological control of Aeromonas salmonicida infection in juvenile Senegalese sole (Solea senegalensis) with Phage AS-A. In: Academic degrees. Aquaculture. 450, 225-233.
Simoes C., Gomes M.C., Neves M.G.P.M.S., Cunha A., Tome J.P.C., Tome A.C., Cavaleiro J.A.S., Almeida A., Faustino M.A.F. (2016) Photodynamic inactivation of Escherichia coli with cationic meso-tetraarylporphyrins - The charge number and charge distribution effects. In: Academic degrees. Catalysis Today. 266, 197-204.
Sousa I., Maia F., Silva A., Cunha A., Almeida A., Evtyugin D.V., Tedim J., Ferreira M.G. (2015) A novel approach for immobilization of polyhexamethylene biguanide within silica capsules. In: Academic degrees. Rsc Advances. 5, 112, 92656-92663.
Oliveira V, Silva A, Marques B, Almeida A, Gomes NCM, Lillebø A, Cunha A (2015) Microcosm assessment of the effect of an acute mercury contamination event on the structure and activity of sediment bacterial communities. In: Academic degrees. Applied Microbiology - Open Access. 1:102,
Castro K.A.D.F., Moura N.M.M., Fernandes A., Faustino M.A.F., Simoes M.M.Q., Cavaleiro J.A.S., Nakagaki S., Almeida A., Cunha A., Silvestre A.J.D., Freire C.S.R., Pinto R.J.B., Neves M.D.P.M.S. (2017) Control of Listeria innocua biofilms by biocompatible photodynamic antifouling chitosan based materials. In: Academic degrees. Dyes And Pigments. 137, 265-276.
Alves E., Moreirinha C., Faustino M.A.F., Cunha A., Delgadillo I., Neves M.G.P.M.S., Almeida A. (2016) Overall biochemical changes in bacteria photosensitized with cationic porphyrins monitored by infrared spectroscopy. In: Academic degrees. Future Medicinal Chemistry. 8, 6, 613-628.
Santos L., Pinto A., Filipe O., Cunha A., Santos E.B.H., Almeida A. (2016) Insights on the Optical Properties of Estuarine DOM - Hydrological and Biological Influences. In: Academic degrees. Plos One. 11, 5,
Pereira C., Moreirinha C., Lewicka M., Almeida P., Clemente C., Cunha A., Delgadillo I., Romalde J.L., Nunes M.L., Almeida A. (2016) Bacteriophages with potential to inactivate Salmonella Typhimurium: Use of single phage suspensions and phage cocktails. In: Academic degrees. Virus Research. 220, 179-192.
Fernandez L., Louvado A., Esteves V.I., Gomes N.C.M., Almeida A., Cunha A. (2017) Biodegradation of 17 beta-estradiol by bacteria isolated from deep sea sediments in aerobic and anaerobic media. In: Academic degrees. Journal Of Hazardous Materials. 323, 359-366.
Fernandez L., Esteves V.I., Cunha A., Schneider R.J., Tome J.P.C. (2016) Photodegradation of organic pollutants in water by immobilized porphyrins and phthalocyanines. In: Academic degrees. Journal Of Porphyrins And Phthalocyanines. 20, 1-4, 150-166.
Coelho F.J.R.C., Louvado A., Domingues P.M., Cleary D.F.R., Ferreira M., Almeida A., Cunha M.R., Cunha A., Gomes N.C.M. (2016) Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz. In: Academic degrees. Scientific Reports. 6, 35272,
Oliveira V., Gomes N.C.M., Santos M., Almeida A., Lillebo A.I., Ezequiel J., Serodio J., Silva A.M.S., Simoes M.M.Q., Rocha S.M., Cunha A. (2017) Effects of the Inoculant Strain Pseudomonas sp SPN31 nah (+) and of 2-Methylnaphthalene Contamination on the Rhizosphere and Endosphere Bacterial Communities of Halimione portulacoides. In: Academic degrees. Current Microbiology. 74, 5, 575-583.
Baptista I., Rocha S.M., Cunha A., Saraiva J.A., Almeida A. (2016) Inactivation of Staphylococcus aureus by high pressure processing: An overview. In: Academic degrees. Innovative Food Science & Emerging Technologies. 36, 128-149.
Bartolomeu M., Coimbra S., Cunha A., Neves M.G.P.M.S., Cavaleiro J.A.S., Faustino M.A.F., Almeida A. (2016) Indirect and direct damage to genomic DNA induced by 5,10,15-tris(1-methylpyridinium-4-yl)-20-(pentafluorophenyl)porphyrin upon photodynamic action. In: Academic degrees. Journal Of Porphyrins And Phthalocyanines. 20, 1-4, 331-336.
Bartolomeu M., Rocha S., Cunha A., Neves M.G.P.M.S., Faustino M.A.F., Almeida A. (2016) Effect of Photodynamic Therapy on the Virulence Factors of Staphylococcus aureus. In: Academic degrees. Frontiers In Microbiology. 7,
Gomes M.C., Cunha A., Trindade T., Tome J.P.C. (2016) The role of surface functionalization of silica nanoparticles for bioimaging. In: Academic degrees. Journal Of Innovative Optical Health Sciences. 9, 4,
Kuznetsova A., Domingues P.M., Silva T., Almeida A., Zheludkevich M.L., Tedim J., Ferreira M.G.S., Cunha A. (2017) Antimicrobial activity of 2-mercaptobenzothiazole released from environmentally friendly nanostructured layered double hydroxides. In: Academic degrees. Journal Of Applied Microbiology. 122, 5, 1207-1218.
Domingues P.M., Almeida A., Leal L.S., Gomes N.C.M., Cunha A. (2017) Bacterial production of biosurfactants under microaerobic and anaerobic conditions. In: Academic degrees. Reviews In Environmental Science And Bio-technology. 16, 2, 239-272.
Domingues P, Almeida A, Leal L, Gomes N, Cunha A (2017) Bacterial production of biosurfactants under microaerobic and anaerobic conditions. In: Academic degrees. Reviews In Environmental Science And Bio-technology. 16, 2, 239-272.
Ferreira M., Pereira S., Almeida A., Queiros R., Delgadillo I., Saraiva J., Cunha A. (2016) EFFECT OF TEMPERATURE AND COMPRESSION/DECOMPRESSION RATES ON HIGH PRESSURE INACTIVATION OF LISTERIA. In: Academic degrees. Acta Alimentaria. 45, 1, 61-68.
Fernandez L., Borzecka W., Lin Z., Schneider R.J., Huvaere K., Esteves V.I., Cunha A., Tome J.P.C. (2017) Nanomagnet-photosensitizer hybrid materials for the degradation of 17 beta-estradiol in batch and flow modes. In: Academic degrees. Dyes And Pigments. 142, 535-543.
Bonifácio D, Martins C, David B, Lemos C, MGPMS Neves, Almeida A, Pinto D, Faustino A, Cunha A (2018) Photodynamic inactivation of Listeria innocua biofilms with food-grade photosensitizers: a curcumin-rich extract of Curcuma longa versus commercial curcumin. . In: Academic degrees. Journal Of Applied Microbiology.
Barata J., Cardote T., Neves M.G.P.M.S., Faustino M.A.F., Cunha A., Almeida A., Alves E., Cavaleiro J. (2018) Evaluation of meso-substituted cationic corroles as potential antibacterial agents. In: Academic degrees. Annals Of The Brazilian Academy Of Sciences.
Other Papers (4)
Cunha M.A., Almeida M.A., Alcântara F. (1999) Variação da actividade bacteriana ao longo de um gradiente de salinidade. In: Academic degrees. Revista De Biologia. 17, 1-4, 261-273.
Almeida M.A., Cunha M.A., Alcântara F. (1998) Estratificação da Produtividade de Biomassa Bacteriana em Águas Estuarinas (Ria de Aveiro). In: Academic degrees. Revista De Biologia . 16 , 1-4, 227-228.
Almeida A., Alves E., Costa C., Cunha A., Tomé J., Tomé A.C. , Faustino M.A.F. , Neves M.G.P.M., Cavaleiro J.A.S. (2012) Photodynamic inactivation of pathogenic microorganisms in the environment: an efficient, cost-effective and sustainable technology. In: Academic degrees. Microbiologia. Online, 2,
Cunha, A., Domingues, P-, Louvado, A., Silva, A., Gomes, N.C.M., Almeida, A., Serafim, L. (2013) Bactérias produtoras de biossurfactantes isoladas da Ria de Aveiro. In: Academic degrees. Magazine Da Sociedade Portuguesa De Microbiologia. Ano 2, 4,
Books (3)
Alcântara F., Cunha A., Almeida A. (1996) Microbiologia - Práticas Laboratoriais. In: Academic degrees. Aveiro. 972-789-038-5.
Queiroga H., Cunha M.R., Cunha A., Moreira M.H., Quintino V., Rodrigues A.M., Serôdio J., Warwick R.M. (eds.) (2006) Marine Biodiversity: Patterns and Processes, Assessment, Threats, Mangement and Conservation. In: Developments in Hydrobiology. (EDS.), Academic degrees. Dordrecht. Springer. 183,
Rodrigues A.M., Quintino V., Pinho R., Lourenço A., Lopes M.L., Leão F., Oliveira J., Almeida M.A., Cunha M.A., Pereira R. (2008) Descobrindo a Biodiversidade na Cidade (e-book). In: Academic degrees. Aveiro. Universidade de Aveiro. 13:978-972-789-268-6.
Book Chapter (10)
Cunha A., Almeida A., Ré A., Martins A., Alcântara F. (2006) Modern Multidisciplinary Applied Microbiology - Exploiting Microbes and their Interactions. In: Academic degrees. Weinheim. Wiley-VCH Verlag GmbH & Co. KGaA. ISBN-13: 978-3-527-31611-3.
Almeida A., Cunha A., Faustino A., Tomé A., Neves G. (2010) Photodynamic inactivation of microbial pathogens. Medical and environmental applications. In: Academic degrees.
Cunha A., Almeida A., Coelho F.J.R.C., Gomes N.C.M., Oliveira V., Santos A.L. (2010) Research, Technology and Education Topics in Applied Microbiology and Microbial Biotechnology. In: Academic degrees. Badajoz. Formatex. 2,
Costa L., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Lin Z., Rainho J.P., Rocha J., Cunha A., Almeida A. (2007) Current Research Topics in Applied Microbiology and Microbial Biotechnology. In: Academic degrees. Singapore. World Scientific Publishing Co.
Oliveira A., Almeida A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A.C., Cavaleiro J., Cunha A. (2009) Current Research Topics in Applied Microbiology and Microbial Biotechnology. In: Academic degrees. Singapore. World Scientific Publishing Co.
Santos A.L., Baptista I., Oliveira V., Henriques I, Gomes N.C.M., Almeida A., Correia A., Cunha A. (2010) Microorganisms in Industry and Environment: From Scientific and Industrial Research to Consumer Products. In: Academic degrees. Singapore. World Scientific Publishing. 978-981-4322-10-2.
F.J.R.C. Coelho, S. Sousa, L. Santos, A. L. Santos, A. Almeida, N. C. M. Gomes, Â. Cunha (2010) Studies on Environmental Chemistry-Biological Responses to Contaminants. In: Academic degrees. Tokyo. © by TERRAPUB.
A. Louvado , A. L. Santos , F. Coelho, S. Sousa, A. Moreira, F. Gomes, A. Almeida, N. C. M. Gomes, Â. Cunha (2010) Interdisciplinary Studies on Environmental Chemistry-Biological Responses to Contaminants. In: Academic degrees. Tokyo. © by TERRAPUB.
Almeida A., Cunha A., Santos L., Salvador S., Gomes A. (2007) Current Research Topics in Applied Microbiology and Microbial Biotechnology. In: Academic degrees. Singapore. World Scientific Publishing Co.
Cruz, A., Cavaleiro, A.J., Paulo, A., Louvado, A., Alves, M., Almeida, A., Cunha, A. (2017) Marine Pollution and Microbial Remediation. In: Naik, M.M., Dubey, S.K. . (EDS.), Academic degrees. Springer Singapore. 41-66. 978-981-10-1044-6.
Thesis (43)
Oliveira, V.J. Mediação microbiana na recuperação de sapais. In: Academic degrees. PhD Thesis.
Coelho F.J.R.C (2013) Oil hydrocarbon-bacteria interactions in coastal environments. In: Academic degrees. PhD Thesis.
Cunha A. (2001) Bacterioplâncton de Ria de Aveiro: actividade ectoenzimática e metabolismo de monómeros. In: Academic degrees. PhD Thesis.
Cunha A. (1993) Estudo da microflora bacteriana das águas do Canal de Mira (Ria de Aveiro). In: Academic degrees. Aveiro. Departamento de Biologia - Universidade de Aveiro.
Cunha A. (1993) Resposta de uma comunidade bacteriana estuarina à adição de matéria orgânica na presença de mercúrio: uma experiência de microcosmos. In: Academic degrees. Aveiro. Departamento de Biologia - Universidade de Aveiro.
Ferreira M.R.S. (2013) Efeito da taxa sde pressurização na inativação de Listeria innocua. In: Academic degrees. MSc Thesis.
Santos L. (2013) Hydrological and photochemical influence on dynamics of estuarine bacteria. In: Academic degrees. PhD Thesis.
Pereira S.M.L. (2013) Efeito da temperatura e pH na inativação de Listeria por alta pressão. In: Academic degrees. MSc Thesis.
Santos, A.L.M. (2013) Responses to UV-induced stress in bacterioneuston communities: mechanisms and ecological implications. In: Academic degrees. PhD Thesis.
Sousa, I. (2007) Descrição e caracterização de um microssatélite no gene IFF8 de Candida albicans. (MSc Thesis). In: Academic degrees. MSc Thesis.
Santos, A.L.M. (2008) Impacto da radiação UV sobre a integridade do DNA, metabolismo heterotrófico composição das comunidades bacterioneustónicas (MSc Thesis). In: Academic degrees. MSc Thesis.
Oliveria, A.A. (2008) Aplicação de derivados porfirínicos como fotosensibilizadores na inactivação de endosporos bacterianos (MSc Thesis). In: Academic degrees.
Coelho F.J.R., (2008) Bacterioneuston da Ria de Aveiro: abundância, actividade e degradação de hidrocarbonetos aromáticos policíclicos. In: Academic degrees. MSc Thesis.
Bessa V.S.S. (2007) Dinâmica do Bacterioplâncton da Lagoa da Vela – Influência de Factores Bióticos e Abióticos. In: Academic degrees. MSc Thesis.
Oliveira A. (2008) Aplicação de derivados porfirínicos como fotosensibilizadores na inactivação de endosporos bacterianos. In: Academic degrees. MSc Thesis.
Oliveira V. (2008) Diversidade microbiana em rizosferas de plantas de sapal. In: Academic degrees. MSc Thesis.
Rodrigues S. (2009) Microbial warfare: the role of valinomycin and cereulide. In: Academic degrees. MSc Thesis.
Branco S. (2009) Aplicação das técnicas de FISH e PCR no diagnóstico da leucemia mieloide crónica. In: Academic degrees. MSc Thesis.
Fernandes S. (2009) Caracterização microbiológica de amostras de solos potencialmente contaminados com resíduos radioactivos. In: Academic degrees. MSc Thesis.
Branco, S. (2009) Aplicação das técnicas de FISH e PCR no diagnóstico da leucemia mieloide crónica (Co-orientação). In: Academic degrees. MSc Thesis.
Osório N. (2009) Importância das bactérias fixadoras de azoto na rizosfera de halófitas. In: Academic degrees. MSc Thesis.
Louvado, A. (2010) António Louvado. In: Academic degrees. MSc Thesis.
Gomes, C. (2010) Glycosilated porphyrines as photosensitizers for the inactivation of microorganisms . In: Academic degrees. MSc Thesis.
Almeida, P.R. (2010) Estudo da incidência de septicemias em doentes oncológicos e comparação do resultado das respectivas hemoculturas com a determinação da procalcitonina . In: Academic degrees. MSc Thesis.
Reis, A. (2011) Desenvolvimento de resistência à inactivação por alta pressão em bactérias. In: Academic degrees. MSc Thesis.
Medeiros, J. (2011) Optimal sample size for assessing bacterioneuston structural diversity. In: Academic degrees. MSc Thesis.
Domingues, P.M. (2011) Produção de biossurfactantes em bactérias hidrocarbonoclásticas. In: Academic degrees. MSc Thesis.
Silva, C. (2011) Avaliação Bacteriológica de Sangue do Cordão Umbilical. In: Academic degrees. MSc Thesis.
Gomes, D. (2011) . Detecção do Ag HLA-B27 – Métodos: Citometria de Fluxo e PCR-GenoQuick . In: Academic degrees. MSc Thesis.
Martins, C. (2011) Polímeros funcionais como agentes microbianos para desinfeção oral. In: Academic degrees. MSc Thesis.
Beirão, S. (2012) Inactivação Fotodinâmica de Biofilmes Bacterianos. In: Academic degrees. MSc Thesis.
Fernandes, S. (2012) Porfirinas expandidas: avaliação da eficiência em aPDT. In: Academic degrees. MSc Thesis.
Lykoholat, V. (2012) Genes de proteorrodopsinas em bacterioneuston e bacterioplâncton da Ria de Aveiro . In: Academic degrees. MSc Thesis.
Silva, A.P. (2012) Efeito do meio de cultura na produção de ramnolípidos bacterianos. In: Academic degrees. MSc Thesis.
Ferreira, M. (2013) Efeito da taxa de compressão na inactivação de microrganismos por tecnologia de alta pressão. In: Academic degrees. MSc Thesis.
Pereira, S. (2013) Efeito da temperatura na cinética de inativação de Listeria innocua por alta pressão. In: Academic degrees. MSc Thesis.
Rocha, D.M. (2014) Inativação fotodinâmica de microrganismos com ftalocianinas multicarregadas . In: Academic degrees. MSc Thesis.
Couceiro, J. (2014) Inativação fotodinâmica de endósporos bacterianos: aplicação de alta pressão como coadjuvante na ligação do fotossensibilizador. . In: Academic degrees. MSc Thesis.
Santos, L. (2014) Estudos de possíveis aplicabilidades de extratos de duas plantas invasoras em Portugal: o Pittosporum undulatum e Eryngium pandanifolium . In: Academic degrees. MSc Thesis.
Araújo, V. (2014) O efeito do stresse frio na virulência de Listeria monocytogenes . In: Academic degrees. MSc Thesis.
Marques, André Eduardo Baptista de Oliveira (2015) Estudo da variação da abundância e diversidade de procariotas em sedimentos subsuperficiais marinhos. In: Academic degrees. MSc Thesis.
Pereira, Ângela Maria da Costa (2015) Inactivation of Pseudomonas spp. biofilms with natural and synthetic photossensitizers. In: Academic degrees. MSc Thesis.
Oliveira, J. (2012) Salubridade Microbiológica dos Moluscos Bivalves – Relevância na Segurança Alimentar / Microbiological quality of bivalves - relevance to food safety. In: Academic degrees. PhD Thesis.
Communications (258)
Santos, L.,, Baptista I., Henriques I., Sousa I., Correia A., Cunha A., Almeida A. (2006) Structure of bacterial assemblages down water column of a shallow estuarine system (Ria de Aveiro, Portugal). In: Academic degrees.
Cunha A., Almeida A., Alcântara F. (1998) Processos microbianos de degradação e reciclagem de matéria orgânica na Ria de Aveiro. In: Academic degrees.
Cunha M.A., Almeida M.A., Alcântara F. (1998) Variação da actividade bacteriana ao longo de um gradiente de salinidade. In: Academic degrees.
Cunha M.A., Almeida M.A., Alcântara F. (1998) Short term responses of the bacterial communities in the frontier with the sea. In: Academic degrees.
Rodrigues S., Pereira M.E., Cunha A., Almeida A., Duarte A.C. (2006) Recommendations from environmental monitoring in “Ria de Aveiro”: organic and inorganic loads, microorganisms and industrial discharges. In: Academic degrees.
Coelho F., Santos L., Almeida A., Cunha A. (2006) Comparative analysis of bacterioneuston and bacterioplankton in na estuarine system (Ria de Aveiro, Portugal). In: Academic degrees.
Yamasaki A., Cunha M.A., Coelho E.V.M., Oliveira J.A.B.P., Duarte A.C., Gomes M.T.S.R. (2002) An acoustic wave biosensor to evaluate copper toxicity. In: Academic degrees.
Cunha M.A., Bio A., Alcântara F. (1989) Géneros dominantes de bactérias saprófitas junto à embocadura do Canal de Mira. In: Academic degrees.
Cunha M.A., Almeida M.A., Alcântara F. (1990) Bacterial populations in the Ria de Aveiro, Western coast of Portugal. In: Academic degrees.
Cunha M.A., Alcântara F. (1995) HgCl2: Interferência na resposta de comunidades bacterianas estuarinas a pulsos de matéria orgânica. In: Academic degrees.
Cunha M.A., Almeida M.A., Alcântara F. (1997) Variação da actividade planctónica com o regime de marés na Ria de Aveiro. In: Academic degrees.
Cunha M.A., Almeida M.A., Alcântara F. (1998) Compartimentação da actividade respiratória aeróbia em ambientes estuarinos (Ria de Aveiro, Portugal). In: Academic degrees.
Cunha M.A., Dias J.M., Almeida M.A., Fortes J.F., Alcântara F. (2001) Fluxes of bacterioplankton communuties and associated heterotrophic activities at the estuarine-ocean boundary (Ria de Aveiro, Portugal). In: Academic degrees.
Cunha M.A., Almeida M.A., Alcântara F. (2001) Ectoenzymatic activity and glucose heterotrophic metabolism in a shallow estuary (Ria de Aveiro, Portugal): influence of bed sediments and salt marshes. In: Academic degrees.
Cunha M.A., Almeida M.A., Pedrosa F., Matos J., Santos L. (2004) Actividade heterotrófica de comunidades bacterianas de sapais (Ria de Aveiro e estuário do Tejo). In: Academic degrees.
Cunha A., Almeida A. (2005) Bacterial activity in portuguese coastal waters between an estuarine plume and a sewage outfall. In: Academic degrees.
Cunha A., Almeida A., Ré A., Martins A., Alcântara F. (2005) Perylene toxicity in the estuarine environment of Ria de Aveiro (Portugal). In: Academic degrees.
Cunha A., Almeida A. (2005) Relations between nitrogen availability, bacterioplankton ectoenzymatic activity and monomer incorporation in an estuarine system. In: Academic degrees.
Cunha A., Santos L., Coelho F., Almeida A. (2006) Heterotrophic activity of bacterioneuston and bacterioplankton in an estuarine system (Ria de Aveiro, Portugal). In: Academic degrees.
Cunha A., LIma E., Matos P., Coelho F., Loureiro N., Almeida A. (2006) Abundance, physiological diversity and activity of salt marsh bacteriobenthos (Ria de Aveiro, Portugal). In: Academic degrees.
Carvalho C.M.B., Gomes A.T.P.C., Faustino M.A.F., Tomé J.P.C, Neves M.G.P.M.S., Tomé A.C., Lin Z., Fernandes S.C.D., Prata C.C.B., Almeida M.A., Cunha M.A., Rocha J., Cavaleiro J.A.S. (2005) Photoinactivation of sewage bacterial assemblages present in wastewater by neutral and cationic porphyrins. In: Academic degrees.
Carvalho C.M.B., Gomes A.T.P.C., Faustino M.A.F., Tomé J.P.C, Neves M.G.P.M.S., Tomé A.C., Lin Z., Rainho J.P., Fernandes S.C.D., Prata A.C., Almeida M.A., Cunha M.A., Rocha J., Cavaleiro J.A.S. (2005) Photoinactivation of wastewater microorganisms by neutral porphyrins. In: Academic degrees.
Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Lin Z., Rainho J.P., Almeida M.A., Cunha M.A., Rocha J., Cavaleiro J.A.S. (2006) Synthesis and photochemical properties of immobilized porphyrins. In: Academic degrees.
Almeida M. A, Cunha M. A. (2000) Bacterioplâncton da Ria de Aveiro: variações tidais e geográficas. In: Academic degrees.
Almeida M.A., Cunha M.A., Alcântara F. (2003) Reactivity of estuarine bacterioplankton production to spatial and seasonal changes in the trophic background (Ria de Aveiro, Portugal). II Plankton Symposium, 16-19 October ). In: Academic degrees.
Almeida M.A., Cunha M.A., Silva H., Caçador I (2003) Influence of the composition of salt marsh vegetation on bacterial activity. In: Academic degrees.
Almeida M.A., Cunha M.A . (2005) Influence of nitrogen availability on the distribution of bacterial productivity in an estuarine system. In: Academic degrees.
Almeida A,, Loureiro N., Baptista I., Cunha A., Coelho F., Santos L. (2006) Relashionship between bacterial membrane integrity and bacterial production in the surface microlayer of the estuarine system Ria de Aveiro. 5º Simpósio sobre a Margem Ibérica Atlântica. In: Academic degrees.
Almeida A., Salvador S., Cunha A. (2006) Evaluation of bacterial contamination of two aquaculture systems: impact on water quality of the estuarine system Ria de Aveiro. In: Academic degrees.
Almeida MA, Baptista I, Cunha MA, Carvalho CMB, Gomes ATPC, Faustino MAF, Tomé JPC, Neves MGPMS, Tomé AC, Zhi Lin, Rainho JP, Rocha J, Cavaleiro JAS (2007) Photoinactivation of sewage bacteriophages using cationic porphyrins. In: Academic degrees.
Baptista I., Santos L., Sousa I., Santos E., Cunha M.A., Almeida M.A. (2005) Factors underlying the shape of vertical profiles of bacterial density, viability and productivity in the ecosystem Ria de Aveiro. In: Academic degrees.
Almeida M.A., Cunha M.A., Alcântara F. (2000) Bacterioplankton thriving against the seasonal fluctuation of primary production in a shallow estuary. In: Academic degrees.
Almeida MA, Cunha MA, Alcântara F (2001) Bacterioplankton production in a shallow estuarine system (Ria de Aveiro): impact of salt marsh and bed sediments. In: Academic degrees.
Almeida MA, Cunha MA, Alcântara F (2001) Physiological responses of marine and brackish water bacterial assemblages in a tidal estuary (Ria de Aveiro, Portugal).,. In: Academic degrees.
Almeida M.A., Cunha M.A., Santos L., Baptista I., Malatkova B., Santos E.B.H. (2005) Effect of organic matter composition on bacterial activity distribution down the water column of a shallow estuarine system. In: Academic degrees.
Almeida MA, Cunha MA, Fernandes S, Sobral P, Alcântara F (2005) Copper effects in bacterial activity of estuarine silty sediments. In: Academic degrees.
Cunha M.A., Pereira M.G., Rodrigues R., Alcântara F. (1991) Flutuações anuais e tidais de parâmetros microbiológicos e hidrográficos no Canal de Mira (Ria de Aveiro). In: Academic degrees.
Almeida MA.., Cunha MA.. (2006) Vertical Variation of Bacterial Production in Water Column of the Coastal Atlantic Region off Aveiro (NW Portugal). In: Academic degrees.
Rodrigues R., Cunha M.A., Alcântara F. (1992) Estudo da actividade do bacterioplancton no Canal de Mira (Ria de Aveiro): produção bacteriana e carga energética. In: Academic degrees.
Almeida MA, Baptista I, Coelho F, Cunha A, Loureiro.N, Salvador S, Santos, L (2006) Vertical variation of viruses-to-bacterium ratio in a estuarine System (Ria de Aveiro, Portugal). In: Academic degrees.
Gomes A, Carvalho C, Faustino MA, Tomé JP, Neves MG, Tomé AC, Zhi Lin, Rainho J, Fernandes S, Prata AC, Almeida MA, Cunha MA, Rocha J, Cavaleiro J (2005) Photoinactivation of wastewater microorganisms by cationic and neutral porphyrins. In: Academic degrees.
Gomes A, Carvalho C, Faustino MA, Tomé JP, Neves MG, Tomé AC, Zhi Lin, Rainho JP, Fernandes SC, Prata AC, Almeida MA, Cunha MA, Rocha J, Cavaleiro JA (2005) Cationic Porphyrins as Photosensitizers in Cationic Porphyrins as Photosensitizers in Photoinactivation of Sewage Bacterial Assemblages. In: Academic degrees.
Pato P., Pinto C., Cunha A., Almeida A., Pereira M.E., Vale C., Duarte A.C . (2004) Tidal variability in the transport of particulate mercury. . In: Academic degrees.
Rainho J.P., Rocha J., Lin Z., Faustino M.A., Cunha M.A., Almeida M.A., Tomé J., Tomé A., Neves G., Cavaleiro J., Carvalho C., Gomes A. (2005) Preparation of new immobilized photosensitizers. In: Academic degrees.
Pedro P, Tação M, Almeida A, Silva H, Cunha A (2003) Growth efficiency of heterotrophic bacteria in a salt marsh. In: Academic degrees.
Sousa I., Baptista I., Santos L., Almeida M.A., Santos E., Cunha M.A. (2005) Effect of solar radiation on DOM quality and on marine bacterioplankton ectoenzymatic activity and monomer uptake. In: Academic degrees.
Sousa I., Batista I., Santo L., Almeida M.A., Santos E., Cunha M.A. (2005) Effect of solar radiation on DOM quality and on marine bacterioplankton ectoenzymatic activity and monomer uptake. In: Academic degrees.
Santos L, Cunha MA, Gomes A, Santos AL, Hornibrook E, Pinheiro LM, Nuzzo M, Oliveira V, Almeida MA (2007) Distribution and activity of prokaryote communities in the sediments of the mud volcano Porto (Gulf of Cadiz). In: Academic degrees.
Santos L, Almeida MA, Niemann H, Boetius A, Boetius A, Cunha MA, Pinheiro LM, Niemann H, Cunha MA, Almeida MA, Magalhães V, Pinheiro LM (2007) Microbial communities involved in anaerobic methane oxidation in mud volcanoes from the Gulf of Cadiz. In: Academic degrees.
Santos L, Almeida MA, Coelho F, Cunha MA, Lima E, Loureiro N, Matos P, Salvador S, Pinheiro LM (2006) Distribution, activity and diversity of microbial communities from sediments of the mud volcano Mercator (Gulf of Cadiz). In: Academic degrees.
Santos L, Cunha MA, Matos J, Pedrosa F, Almeida MA (2005) Impact of salt marsh bacterial communities to the bacterioplankton dynamics of two estuarine systems (Ria de Aveiro and Tagus Estuary). In: Academic degrees.
Santos L, Cunha MA, Matos J, Pedrosa F, Almeida MA (2004) Exportação de carbono bacteriano do sapal para o estuário (Ria de Aveiro). In: Academic degrees.
Santos L, Niemann H, Boetius A, Pinheiro LM, Cunha A, Almeida A (2006) Microbial communities involved in anaerobic methane oxidation in mud volcanoes from the Gulf of Cadiz. In: Academic degrees.
L. Santos, F. Coelho, C. Mendes, L. Nance, E. Santos, A. Cunha, A. Almeida (2007) Does photochemical alteration of dissolved organic matter influence the structure and activity of the estuarine prokaryote communities?. In: Academic degrees.
Oliveira V, Santos AL, Mendes C, Santos L, Almeida A, Cunha A (2007) Influence of plant colonization on te size, physological diversity and heterotrophic activityof salt marsh bacteriobenthos (Ria de Aveiro, Portugal). In: Academic degrees.
Santos AL, Mendes C, Coelho F, Oliveira V, Santos L, Almeida A, Cunha A (2007) Dynamics of bacterioneuston and bacterioplankton communities in the estuarine system Ria de Aveiro, Portugal. In: Academic degrees.
Bessa V, Lopes AR, Santos L, Pereira MJ, Almeida A, Cunha A (2007) Bacterioplankton dynamics during the development of cyanobacteria bloom in a Portuguese freshwater shallow lake (Lagoa da Vela). In: Academic degrees.
Almeida A , Cunha A, Gomes A, Santos L, Trigo C (2007) Viruses and pathogenic bacteria f fish in two aquaculture systems of the estuarine system Ria de Aveiro. In: Academic degrees.
Almeida A, Costa L, Cunha A, Carvalho C, Tomé J, Faustino M A, Neves M. G, Tomé A, Cavaleiro J (2007) Effects of light intensity and porhyrin concentration on sewage bacteriophage inactivation. In: Academic degrees.
Oliveira A, Cunha A, Almeida A, Carvalho C, Tomé J, Faustino MAF, Neves MG , Tomé AC , Cavaleiro J (2007) Porphyrin derivatives as photosensitizes for the inactivation of bacterial endospores. In: Academic degrees.
Almeida A, Almeida A., Cunha A, Cunha A., Santos L, Santos L., Salvador S, Salvador S., Gomes A, Gomes A. (2007) Evaluation of the impact of two aquaculture systems on bacterial communities of the estuarine system Ria de Aveiro. In: Academic degrees.
Alves E., Carvalho C., Tomé J., Faustino A., Neves G., Tomé A., Cavaleiro J., Cunha A., Almeida A. (2007) Recombinant bioluminescent Escherichia coli: photodynamic inactivation by cationic porphyrin derivatives under artificial and solar light irradiation. In: Academic degrees.
Costa L, Carvalho C, Tomé J, Faustino A, Neves G, Tomé A, Cavaleiro J, Zhi Lin, Rainho J, Rocha J, Cunha A, Almeida A (2007) Sewage bacteriophage photoinactivation by porphyrins immobilized in solid matrixes. In: Academic degrees.
Carvalho, C. M. B., , Faustino, M. A. F., , Tomé, J. P. C., , Neves, M. G. P. M. S., , Tomé, A. C., , Lin, Z., , Rainho, J. P., , Almeida, M. A., , Cunha, M. A., , Rocha, J., , Cavaleiro J. (2007) Immobilized porphyrins: synthesis and antiviral evaluation. 1. In: Academic degrees.
Almeida A., Salvador S., Loureiro C., Cunha A., Lopes A.R., Bessa V.S., Pereira M.J. (2007) Variation of viruses-to-bacterium ratio during a phytoplankton bloom in a shallow freshwater lake. In: Academic degrees.
Alves E., Almeida A., Cunha A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J., Lin Z., Rainho J., Rocha J. (2007) Antibacterial activity of cationic porphyrin derivatives against enteric bactéria. In: Academic degrees.
Costa L., Costa L. , Almeida A., Almeida A., Cunha A., Cunha A., Carvalho C., Tomé J., Faustino M.A., Tomé J., Neves M.G., Faustino M.A.F., Neves M.G., Tomé A., Cavaleiro J., Tomé A., Cavaleiro J. (2007) Photoinactivation of sewage bacteriophages with cationic porphyrins. In: Academic degrees.
Oliveirra A., Cunha A., Carvalho C., Tomé J., Faustino M.A.F. , Neves M.G., Tomé A.C., Cavaleiro J. (2007) Porphyrin derivatives as photosensitizes for the inactivation of bacterial endospores. In: Academic degrees.
Santos L., Coelho F., Loureiro N., Santos E., Cunha A., Almeida A. (2007) Effect of photochemical organic matter degradation on microbial activity in the estuarine system Ria de Aveiro. In: Academic degrees.
Sousa I., Cunha A., Sampaio P., Pais C. (2007) Descrição e caracterização de um microssatélite no gene IFF8 de Candida albicans. In: Academic degrees.
Almeida A., Costa L., Cunha A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Effects of light intensity and porhyrin concentration on sewage bacteriophage inactivatio. In: Academic degrees.
Bessa V.S.S., Lopes A.R., Santos L., Almeida A., Cunha A., Pereira M.J. (2007) Bacterioplankton assessing during the course of a cyanobacterial bloom in a PPortuguese freshwater shallow lake (Lagoa da Vela). In: Academic degrees.
Gomes A., Santos L., Cunha A., Almeida A. (2007) Prokaryote and viral profiles of abundance in the Semenovich, Porto and Bonjardim mud volcanoes. In: Academic degrees.
Mendes C., Santos A.L., Santos L., Cunha A,, Almeida A. (2007) Profiles of abundance, viability and productivity of bacterioneuston in the estuarine system Ria de Aveiro. In: Academic degrees.
Oliveira A., Cunha A., Almeida A., Carvalho C., Faustino M.A.F. , Neves M.G., Tomé A.C., Cavaleiro J. (2007) Porphyrin derivatives as photosensitizers for the inactivation of bacterial endospores. In: Academic degrees.
Santos A.L., Mendes C., Coelho F., Oliveira V., Santos L., Almeida A., Cunha A. (2007) Seasonal and spatial patterns of bacterioneuston and bacterioplankton communities in the estuarine system Ria de Aveiro, Portugal. In: Academic degrees.
Almeida A., Cunha A., Gomes A., Santos L., Trigo C (2007) Viruses and pathogenic bactéria of fish in two aquaculture systems of the estuarine system Ria de Aveiro. In: Academic degrees.
Almeida A., Cunha A., Santos L., Salvador S., Gomes A. (2007) Evaluation of the impact of two aquaculture systems on bacterial communities of the estuarine system Ria de Aveiro. In: Academic degrees.
Alves E., Almeida A., Cunha A., Carvalho C., Tomé J., Faustino M.A.F., Neves M.G., Tomé A., Cavaleiro J. (2007) Effect of porphyrin charge in the inactivation of enteric bacteria. In: Academic degrees.
Costa L., Almeida A., Cunha A., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Effects of cationic porphyrins charge on a sewage bacteriophage inactivation. In: Academic degrees.
Cunha A., Coelho F., Santos A.L., Oliveira V., Santos L., Almeida A. (2007) Characterization of bacterioplankton and bacterioneuston in the estuarine system Ria de Aveiro, Portugal. In: Academic degrees.
Santos L., Coelho F., Loureiro N., Santos E., Cunha A., Almeida A. (2007) Does photochemical alteration of dissolved organic matter influence the structure and activity of estuarine prokaryote communities?. In: Academic degrees.
Coelho F. L. , Santos L, Santos A. L. , Almeida A., Cunha A. (2008) Comparative analysis of bacterioneuston and bacterioplankton along a gradient of contamination with polycyclic aromatic hydrocarbon. In: Academic degrees.
Santos A.L., Henriques I., Correia A., Almeida A., Cunha A. (2008) Effects of Ultraviolet Radiation on Estuarine Bacterioneuston and Bacterioplankton (Ria de Aveiro, Portugal). In: Academic degrees.
Santos A.L., Santos L., Henriques I., Correia A., Almeida A., Cunha A. (2008) Alretações globais e ecossistemas estuarinos: Impacto da radiação ultravioleta nas comunidades bacterianas da Ria de Aveiro. In: Academic degrees.
Coelho F., Santos L., Santos A.L., Almeida A., Cunha A. (2008) Microrganismos nas águas da Ria de Aveiro: Comparação entre bacterioneuston e bacterioplâncton ao longo de um gradiente de contaminação. In: Academic degrees.
Silva Y., Salvador S. , Cunha A,., Almeida A . (2008) Avaliação da qualidade microbiológica em aquaculturas localizadas na Ria de Aveiro. In: Academic degrees.
Henriques I., Alves A., Tacão M., Cunha A., Almeida A., Correia A. (2005) Genetic diversity and dynamics of free-living bacterial communities along an estuarine gradient (Ria de Aveiro, portugal). In: Academic degrees.
Henriques I., Almeida A., Cunha A., Saavedra M.J., Correia A. (2003) Analysis of the bacterioplankton community in Ria de Aveiro: a molecular approach. In: Academic degrees.
Henriques I., Saavedra M. J., Almeida A., Cunha A., Correia A. (2003) Phylogenetic analysis of bacterioplankton community in Ria de Aveiro. In: Academic degrees.
Henriques I., Almeida A., Cunha A., Saavedra M.J., Correia A. (2003) Use of denaturing gradient gel electrophoresis to characterise bacterioplankton communities. In: Academic degrees.
Coelho F., Santos L., Almeida A., Cunha A. (2006) Comparative Analysis of Bacterioneuston and Bacterioplankton in an Estuarine System (Ria De Aveiro, Portugal). In: Academic degrees.
Coelho F., Santos L., Santos A. L., Almeida A., Cunha A. (2008) Comparative analysis of bacterioneuston and bacterioplankton along a gradient of contamination with polycyclic aromatic hydrocarbon. In: Academic degrees.
Coelho F., Sousa S., Santos L., Santos A. L., Almeida A., Cunha A. (2009) Bacterioneuston of Ria de Aveiro: abundance, heterotrophic activity and degradation of PAH. In: Academic degrees.
Coelho F., Moreira A., Simões C., Gomes F., Sousa S., Ramos A., Louvado A., Santos A. L., Gomes N.C.M., Almeida A., Cunha A. (2009) Microbiologia Ambiental: potencial biotecnológico da Ria de Aveiro. In: Academic degrees.
Coelho F., Sousa S., Santos A. L., Gomes N.C.M., Almeida A., Cunha A. (2009) PAH degrading bacterial community in an estuarine system. Biological Responses to Chemical Contaminants: from molecular to community level. In: Academic degrees.
Prata C. , Ribeiro A. , Cunha A. , Gomes N. C. M. , Almeida A. (2009) Marine surface microlayer as a source of viruses. In: Academic degrees.
Cruz C, Santos AL, Santos L, Cunha A, Almeida A (2007) Profiles of abundance, viability and productivity of bacterioneuston in the estuarine system Ria de Aveiro. In: Academic degrees.
Tavares A., Dias S.R.S., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Alves E., Almeida A. (2009) Photoinactivation mechanism of Gram negative recombinant bioluminescent bacteria by cationic porphyrins. In: Academic degrees.
Carneiro I.V.M., Pereira J.B., Tomé J.P.C., Carvalho C.M.B., Tomé A.C., Neves M.G.P.M.S., Faustino M.A.F., Alves E., Tavares A., Cunha Â., Almeida A., Cavaleiro J.A.S. (2009) Synthesis and biological evaluation of pyridine-4-sulfanyl-substituted-substituted phthalocyanines. In: Academic degrees.
Costa D.C.S. , Alves D.A., Carvalho C.M.B., Tomé J.P.C., Tomé A.C., Neves M.G.P.M.S., Faustino M.A.F., Cavaleiro J.A.S., Alves E., Tavares A., Cunha Â., Almeida A. (2009) Synthesis and biological evaluation of new water-soluble porphyrins. In: Academic degrees.
Dias S.R.S., Carvalho C.M.B., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Alves E., Costa L., Tavares A., Almeida A., Cunha Â., Cavaleiro J.A.S. (2009) New immobilized photosensitizers for the photoinactivation of environmental microorganisms. In: Academic degrees.
Teixeira D.F.R., Neves M.G.P.M.S., Marques M.G.S., Ramos C.I.V., Tomé J.P.C., Tomé A.C., Alves E., Tavares A., Almeida A., Cunha Â., Faustino M.A.F., Cavaleiro J.A.S. (2009) New photosensitizing materials based on immobilized chlorin on silica. In: Academic degrees.
Tavares A., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Alves E., Costa L., Almeida A. (2009) Study of the photodynamic inactivation mechanism of a recombinant bioluminescent Escherichia coli. In: Academic degrees.
Tavares A., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J., Carvalho C., Cunha A., Gomes N., Alves E., Almeida A. (2009) Study of the photoinactivation mechanisms of a recombinant bioluminescent Escherichia coli. In: Academic degrees.
Mendes C., Santos A.L., Gomes N.C.M., Cunha A., Almeida A (2009) ROLE OF LYSOGENY AT THE AIR-WATER INTERFACE. In: Academic degrees.
Pereira C, Santos A L, Arrojado C, Santos M, Cunha A, Gomes NCM, Almeida A (2009) Phage effects on the structural bacterial diversity in aquaculture water. In: Academic degrees.
Arrojado C., Santos A. L., Pereira C., Carvalho C.M.B, Tomé J.P.C, Faustino M.A.F, Neves M.G.P.M.S, Tomé A.C, Cavaleiro J.A.S, Cunha A., Gomes N.C.M, Almeida A. (2009) Inactivation of pathogenic bacteria of aquaculture systems by porphyrin derivatives. In: Academic degrees.
Alves E., Almeida A., Cunha Â., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Antibacterial activity of cationic porphyrin derivatives against enteric bacteria. In: Academic degrees.
Arrojado C., Santos A. L., Pereira C., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S, Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M, Almeida A. (2009) Inactivation of pathogenic bacteria of aquaculture systems by porphyrin derivatives. In: Academic degrees.
Arrojado C., Santos A. L., Pereira C., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S, Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M, Almeida A. (2009) Inactivation of pathogenic bacteria of aquaculture systems by porphyrin derivatives. In: Academic degrees.
Arrojado C., Santos A. L., Pereira C., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Almeida A. (2009) Inactivation of pathogenic bacteria of aquaculture systems by porphyrin derivatives. In: Academic degrees.
Oliveira V., Santos A.L., Coelho F., Aguiar C., Sousa S., Lopes S., Gomes N.C.M, Almeida A., Cunha A. (2009) Bacterial in salt-marsh sediments: Influence of plant colonization on abundance, Physiological diversity and heterotrophic activity (Ria de Aveiro, Portugal). In: Academic degrees.
Oliveira V., Santos A.L., Coelho F., Aguiar C., Gomes N.C.M., Almeida A., Cunha A. (2009) Structural diversity, physiological profiles and abundance of sulfate-reducing bacteria in bacterial communities of salt-marsh sediments (Ria de Aveiro, Portugal). In: Academic degrees.
Oliveira V., Aguiar C., Gomes N.C.M., Almeida A., Cunha A. (2009) Património Microbiológico do Sapal da Ria de Aveiro: importância das bactérias para a reciclagem de matéria orgânica. Congresso Internacional de História e Património de Aveiro. In: Academic degrees.
Silva R.N., Tómas A.C., Tómas J.P.C., Neves M.G.P.M.S., Faustino M.A.F., Cavaleiro J.A.S., Oliveira V., Almeida A., Cunha A. (2009) Evaluation of the adsorvation/activity relationship of a cationic porphyrin in Bacillus endospores. In: Academic degrees.
Santos A.L., Baptista I., Oliveira V., Lopes S., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2009) Role of Photochemically-Induced Oxidative Stress in Determining the Biological Effects of UV Radiation in Bacteria. In: Academic degrees.
Pereira C., Santos A. L., Arrojado C., Cunha A., Gomes N.C.M., Newton N.C.M., Almeida A. (2009) Bacterial diversity of aquaculture systems on the Ria de Aveiro estuarine. In: Academic degrees.
Santos A.L., Lopes S., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2009) Resistance to DNA-Damage and UV-Induced Oxidative Stress in Estuarine Bacterioneuston. In: Academic degrees.
Louvado A., Santos A.L., Coelho F., Sousa S., Moreira A., Gomes F., Almeida A., Gomes N.C.M., Cunha A. (2009) Isolation of Surfactant-Resistant Bacteria from the Surface Microlayer. In: Academic degrees.
Louvado A., Santos A.L., Coelho F., Sousa S., Moreira A., Gomes F., Almeida A., Gomes N.C.M., Cunha A. (2009) Biotechnological Potential of Surfactant Resistant Bacteria from the Surface Microlayer. In: Academic degrees.
Pereira C., Santos A. L., Arrojado C., Cunha A., Gomes N.C.M., Almeida A. (2009) Bacterial diversity of aquaculture systems on the Ria de Aveiro estuarine. In: Academic degrees.
Santos A.L., Lopes S., Alves E., Gomes N.C.M., Correia A., Almeida A., Cunha A. (2009) Involvement of reactive oxygen species in UVR-induced damage of estuarine bacterioneuston isolates. In: Academic degrees.
Santos A.L., Baptista I., Henriques I., Correia A., Almeida A., Cunha A. (2009) Effects of Ultraviolet Radiation on the Activity, Structure and Diversity of Estuarine Bacterioneuston. In: Academic degrees.
Santos A.L., Henriques I., Correia A., Almeida A., Cunha A. (2008) UV-induced stress and UV resistance in bacterioneuston. In: Academic degrees.
Santos, A.L., Santos, A.L., Baptista, I., Baptista, I., Lopes, S., Lopes, S., Gomes, N.C.M., Henriques, I., Gomes, N.C.M., Henriques, I., Correia, A., Almeida, A., Almeida, A., Correia, A., Cunha, A., Cunha, A. (2009) Biological and physiological responses of bacterioneuston and bacterioplankton to experimental UV-B exposure. In: Academic degrees.
Baptista, I., Cunha, A., Almeida, A. (2008) Determination of Specific Conversion Factors and Incubation Conditions for the Estimation of Bacterial Biomass Productivity in the Estuarine System of Ria de Aveiro. In: Academic degrees.
Alves E., Almeida A., Cunha Â., Carvalho C., Tomé J., Faustino M.A., Neves M.G., Tomé A., Cavaleiro J. (2007) Terapia Fotodinâmica Antimicrobiana. In: Academic degrees.
Santos A.L., Lopes S., João C., Henriques I., Gomes N.C.M., Correia A., Almeida A., Cunha A. (2009) UV Radiation induced inactivation and recovery potential in bacterioneuston isolates. In: Academic degrees.
Santos A.L., Coelho F., Santos L., Mendes C., Louvado A., Sousa S., Lopes S., Moreira A., Gomes F., Henriques I., Almeida A., Correia A., Gomes N.C.M., Cunha A. (2009) Characterization and Biotechnological Potential of Bacterioneuston. In: Academic degrees.
Rodrigues, A.M., Quintino, V. , Pinho, R., Lourenço, A., Lopes, M.L., Leão, F., Almeida, M.A., Cunha, M.A., Pereira, R. (2008) Descobrindo a Biodiversidade na Cidade. In: Academic degrees.
Santos A.L., Henriques I., Gomes N.C.M., Almeida A., Correia A., Cunha A. (2009) Impact of UV-B radiation on estuarine and freshwater microbial communities. In: Academic degrees.
Pires, A.C.C., Santos, A.L., Becking, L.E., Voogd, N.J., Almeida, A., Cunha, A., Calado, R., Cleary, D.F.R., Gomes, N.C.M (2009) Freeze-thaw pre-lysis may not improve microbial DNA extraction from sponges. In: Academic degrees.
Gomes, N.C.M., Cleary, D.F.R., Pinto, F.N. , Egas, C., Almeida, A., Cunha, A., Mendonça-Hagler, L.C.S., Smalla, K. (2009) Rhizosphere Microbial Communities in Polluted Urban Mangroves: insights gained by massively parallel pyrosequencing. In: Academic degrees.
Alves E., Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Almeida A. (2010) Antimicrobial photodynamic therapy in aquaculture: effect of physical and chemical properties of water on the photoinactivation of Vibrio fischeri. In: Academic degrees.
Faustino M.A.F., Tavares A., Carvalho C.M.B., Neves M.G.P.M.S., Tomé J.P.C., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Alves E., Almeida A. (2010) Potential development of bacterial resistance and bacterial viability recovery after photodynamic therapy. In: Academic degrees.
Tomé J.P.C., Almeida M.A., Alves E., Carvalho C.M.B., Cavaleiro J.A.S., Costa L., Cunha M.A., Faustino M.A.F., Lin Z., Neves M.G.P.M.S., Rocha J., Tomé A.C. (2010) Nanomagnet-Porphyrin Hybrids for Microorganisms Photoinactivation. In: Academic degrees.
Rodrigues, A.M., Quintino, V., Pinho, R., Lourenço, A., Lopes, M., Leão, F., Almeida, M.A., Cunha, M.A., Pereira, R. (2008) Descobrindo a Biodiversidade na Cidade. In: Academic degrees.
Pires, A.C.C., Cleary, D.F.R., Calado, R., Almeida, A., Cunha, Â., Cavalcanti, S.D.G.A., Smalla, K., Gomes, N.C.M. (2010) Rhizosphere Effect on Archaeal Communities Present in Mangrove Sediment. In: Academic degrees.
Gomes C.F.A.C., Faustino M.A.F., Neves M.G.P.M.S., Cavaleiro J.A.S., Almeida A., Cunha A., Tomé J.P.C. (2010) Cationic Galactoporphyrins on Microorganism Photoinactivation. In: Academic degrees.
Melo M.N., Costa D.D., Santos M.C., Oliveira V., Saraiva J., Cunha A., Almeida A. (2010) Conteúdo em flavonóides e fenóis totais e actividade antioxidante de extractos de lúpulo obtidos sob alta pressão. In: Academic degrees.
Pereira J.B., Alves E.F.A., Faustino M.A.F., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A, Almeida A., Tomé J.P.C. (2010) Cationic Phthalocyanines as Antimicrobial Agents. In: Academic degrees.
Pereira J.B., Alves E.F.A., Faustino M.A.F., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A, Almeida A., Tomé J.P.C. (2010) Cationic Phthalocyanines as Antimicrobial Agents. In: Academic degrees.
Moreira A., Pedrosa-de-Jesus M.H., Correia A., Cunha A. (2010) Assessing student’s questioning in group-based learning: A study with biology. In: Academic degrees.
Gomes C., Gomes C., Neves M.G., Neves M.G., Cavaleiro J., Cavaleiro J., Almeida A., Almeida A., Cunha A., Cunha A., Tomé J. (2010) New cationic glycoporphyrin for the photoinactivation of microorganisms. In: Academic degrees.
Pereira J., Carvalho C., Alves E., Neves G., Cavaleiro J., Almeida A., Cunha A., Tomé J., , , , , (2010) Multi-charge phthalocyanines for microorganisms photoinactivation. In: Academic degrees.
Cunha A., Almeida M.A., Coelho F., Framegas D., Gomes N.C.M., Louvado A. (2010) Surfactant-resistant bacteria from the marine surface microlayer. In: Academic degrees.
Oliveira, J., Cunha, A., Castilho, F., Romalde, J. L., Pereira, M. J. (2008) Bivalve Microbial Contamination and Depuration. In: Academic degrees.
Salvador A., Baptista I., Barros A., Cunha A., Almeida A., Rocha S.M. (2010) HS-SPME combined with GC × GC-ToFMS: a powerful toll for assesssing microbial contamination of cereals and coffee beans. In: Academic degrees.
Salvador A., Baptista I., Barros A., Cunha A., Almeida A., Rocha S.M. (2010) HS-SPME combined with GC × GC-ToFMS: a powerful toll for assesssing microbial contamination of cereals and coffee beans. In: Academic degrees.
Coelho F.J.R.C., Santos A.L., Oliveira V., Santos L., Gomes N.C.M., Almeida A., Cunha A. (2011) Padrões de Variação da Actividade Enzimática Extracelular Bacteriana na Ria De Aveiro. In: Academic degrees.
Alves E., Arrojado C., Pereira C., Carvalho C., Faustino M., Tomé J., Neves M., Tomé A., Cavaleiro J., Cunha A., Gomes N., Almeida A. (2011) Terapia fotodinâmica antimicrobiana como alternativa aos antibióticos para inactivar bactérias patogénicas em pisciculturas. In: Academic degrees.
Almeida A., Cunha A. , Gomes N.C.M., Santos L., Mendes C., Pereira C. (2011) Impacto do Virioplâncton sobre a Comunidade Bacteriana da Ria de Aveiro. In: Academic degrees.
Santos L., Gomes N C M., Cunha A., Almeida A. (2011) Variação da abundância e produtividade bacteriana na Ria de Aveiro durante um período de 10 anos (1996-2007). In: Academic degrees.
Santos L., Santos A. L., Coelho F., Gomes N. C. M., Cunha A., Dias J. M. , Almeida A. (2011) Avaliação da hidrodinâmica estuarina na actividade bacteriana na microcamada superficial. In: Academic degrees.
Pereira C., Silva Y. J., Cunha A., Gomes N.C.M., Almeida A. (2011) Terapia Fágica como Alternativa de Baixo Impacto Ambiental para Inactivar Bactérias Patogénicas em Pisciculturas. In: Academic degrees.
Gomes M.C., Carvalho E.F.A., Carvalho C.M.B., Alves E., Faustino M.A.F., Neves M.G.P.M.S. , Tomé A.C., Cavaleiro J.A.S., Almeida M.A., Cunha M.A., Lin Z., Rocha J., Tomé J.P.C. (2011) Porphyrins and phthalocyanines for wastewater treatment. In: Academic degrees.
Alves E., Costa L., Carvalho C.M.B., Tomé J.P.C., Faustino M.A.F. , Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Almeida A., Cunha Â., Lin Z. (2011) Photodynamic inactivation of bacteria and bacteriophages with new cationic nanomagnet-porphyrin hybrids. In: Academic degrees.
Costa L , Carvalho CMB, Faustino MAF, Tomé JPC, Neves GPMS, Tomé AC, Cavaleiro JAS, Cunha A, Gomes NCM, Almeida A (2011) Behaviour of a non-enveloped virus after ten repeated cycles of aPDT. In: Academic degrees.
Costa L, Carvalho CMB, Faustino MAF, Tomé JPC, Neves GPMS, Tomé AC, Cavaleiro JAS, Cunha A, Gomes NCM, Almeida A (2010) Study of viral resistance following repeated exposure to aPDT and recovery of viability. In: Academic degrees.
Alves E., Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Almeida A. (2010) Antimicrobial photodynamic therapy in aquaculture: effect of temperature, pH, salinity, oxygen and organic matter on the photoinactivation of Vibrio fischeri. In: Academic degrees.
Silva Y., Calado R., Gomes N.C.M., Cunha A., Almeida A. (2011) Application of a rapid method for bacteria detection, in order to evaluate the efficiency of phage therapy as an alternative to inactivate pathogenic bacteria in fish farms. In: Academic degrees.
Silva Y.J., Calado R.J., Gomes N.C.M., Cunha A., Almeida A. (2011) Aplicação de um método rápido de detecção bacteriana para avaliar a eficácia da terapia fágica como alternativa para inactivar bactérias patogénicas em pisciculturas. In: Academic degrees.
Coelho F.J.R.C., Rocha R. J.M., Pires A.C.C., Castanheira J., Costa R., Lillebø A.I., Almeida A., Cunha Â., Calado R., Cleary D., Gomes N.C.M. (2012) Marine experimental life support system for microbial communities. In: Academic degrees.
Silva Y.J., Carla Pereira, Ângela Cunha, Newton C.M. Gomes, Adelaide Almeida (2012) Evaluating seasonal dynamics of bacterial communities in a marine fish aquaculture: a preliminary study before applying phage therapy. In: Academic degrees.
Costa L., Tomé J., Neves M.G., Tomé A. C., Cavaleiro J.A.S., Cunha A., Faustino M.A.F., Almeida A. (2012) Susceptibility of non-enveloped DNA- and RNA–type viruses to photodynamic inactivation. In: Academic degrees.
Almeida J,, Tomé J, , Tomé A, , Neves G, , Cavaleiro J, , Cunha A, , Faustino A, Costa L., Almeida J (2012) Photoinactivation of multidrug-resistant bacteria in hospital wastewaters: influence of antibiotics in its effectiveness. In: Academic degrees.
Silva Y.J., Manco S., Costa R., Rodrigues V., Ferreira H., Pousão-Ferreira P., Almeida M.A., Cunha A., Calado R., Gomes N.C.M., Dias J. (2012) Effect of different culture conditions on the structural diversity of prokaryote communities in the sediment of earth ponds stocked with gilthead seabream Sparus aurata. In: Academic degrees.
Silva Y.J., Calado R., Gomes N.C.M., Cunha A., Almeida M.A. (2012) Application of a rapid method for bacteria detection, in order to evaluate the effect of different cultural conditions on the efficacy of phage therapy as an alternative to inactivate pathogenic bacteria in fish farms. In: Academic degrees.
Cunha, A., Almeida, A., Nunes da Silva, R., Tomé, J.P.C, Neves, M.G.PM.S., Faustino, M.A.F., Cavaleiro, J.A.S., Oliveira, A., Tomé, A.C. (2012) Photoinactivation of Bacillus endospores: inactivation efficiency varies significantly among species. In: Academic degrees.
Cunha, A. (2012) The antimicrobial photodynamic effect prospects on environmental applications. In: Academic degrees.
Cunha, A (2012) Photodynamic inactivation of resistant microbial structures: bacterial endospores, fungal conidia and microbial biofilms. In: Academic degrees.
Coelho F.J.R.C., Rocha R.J.M., Pires A.C.C., Castanheira J.M., Almeida A., Cunha Â., Calado R., Cleary D.F.R., Gomes N.C.M. (2013) Ocean acidification and oil contamination have a synergistic effect on microbial community composition. Abstract Book: 2231. In: Academic degrees.
Santos L., Batista I., Santos A.L., Coelho F.J.R.C., Gomes, N., Dias, J.M., Cunha, Â., Almeida, A. (2013) Heterotrophic activity in the surface microlayer of an estuarine system (Ria de Aveiro). Abstract Book: 2265. In: Academic degrees.
Coelho F.J.R.C., Rocha R.J.M., Pires A.C.C., Castanheira J.M., Rocha S.M., Costa R., Almeida A., Cunha A,, Lillebø A.I., Calado R., Cleary D.F.R., Gomes N.C.M. (2013) Synergistic effects of global climate change and oil pollution on estuarine sediment bacterial communities. Abstract Book: 2005. In: Academic degrees.
Pereira C, Baptista I, Silva AP, Cunha A, Gomes NCM, Romalde JL, Nunes ML, Almeida A (2013) Seasonal variation of bacterial community composition of bivalve molluscs harvesting waters. In: Academic degrees.
Almeida A, Pereira C, Silva YJ, Cunha A, Gomes NCM (2012) Preliminary studies of the applicability of phage therapy with new isolated bacteriophages in marine fish aquaculture. In: Academic degrees.
Oliveira V., Gomes N.C.M., Almeida A., Silva A.M.S, Simões M.M.Q., Smalla K., Cunha A. (2013) Characterization of endophytic community structure and functional diversity associated with two salt marshes plants (Halimione portulacoides and Sarcocornia perennis). In: Academic degrees.
Silva A.P., Oliveira V., Gomes N.C.M., Almeida A., Cunha A. (2013) Effect of culture medium in the production of bacterial rhamnolipids. In: Academic degrees.
Silva A.P., Oliveira V., Gomes N.C.M., Almeida A., Cunha A. (2013) Effect of culture medium in the production of bacterial rhamnolipids. In: Academic degrees.
Alves E., Faustino M.A.F., Tomé J.P.C., Neves M.G. P. M. S., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Almeida A. (2013) Nucleic acid changes during photodynamic inactivation of bacteria by cationic porphyrins. In: Academic degrees.
Alves E., Melo T., Simões C., Faustino M.A.F., Tomé J.P.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Domingues P., Domingues M.R.M., Almeida A., Neves M.G.P.M.S. (2013) Photodynamic oxidation of Staphylococcus warneri membrane phospholipids: new insights based on lipidomics. In: Academic degrees.
Silva YJ, Pereira C, Costa L, Cunha A, Gomes NCM, Almeida A (2013) Influence of organic matter content in the inactivation of the fish pathogenic Aeromonas salmonicida by a new isolated bacteriophage. In: Academic degrees.
Silva YJ, Costa L, Pereira C, Calado R, Gomes NCM, Cunha A, Almeida A (2013) Application of a rapid method for bacteria detection, in order to evaluate the effect of different environmental variables in the efficiency of phage therapy in fish farms. In: Academic degrees.
Baptista I., Cunha A., Saraiva J., Rocha S.M., Almeida A. (2013) High Pressure Processing in the Inactivation of Enterotoxic Bacterial Strains. In: Academic degrees.
Baptista I., Salvador A., Petronilho S., Stein P., Ferreira J., Costa V., Gomes N., Cunha A., Almeida A., Rocha S.R. (2013) Food Flow Extract - Flow Extraction of Microbiological Contaminants. In: Academic degrees.
Santos L, Vaz L, Gomes NMC, Vaz N, Dias JM, Cunha A, Almeida A (2013) Impact of freshwater inflow on bacterial abundance and activity in the estuarine sytem Ria de Aveiro. In: Academic degrees.
Santos L., Gomes N.G.M., Santos E.B.H. , Dias J.M., Cunha A., Almeida A. (2013) Photochemical and microbial alterations of DOM spectroscopic properties in the estuarine system Ria de Aveiro. In: Academic degrees.
Gomes M.C., Silva S. , Faustino M.A.F., Neves M.G.P.M.S. , Almeida A., Cavaleiro J., Tomé J.P.C., CunhaA. (2013) Cationic galactoporphyrin photosensitisers against UV-B resistant bacteria: oxidation of lipids and proteins by 1O2. In: Academic degrees.
Pinto A.G.M., Cunha A., Gomes NMC, Santos E.B.H., Almeida A. (2013) Effect of solar irradiation on heterotrophic bacteria in the marine environment. In: Academic degrees.
Beirão S., Fernandes S., Tomé J.P.C., Neves M.G.P.M.S., Almeida A., Cunha A., Faustino A. (2013) Photodynamic inactivation of bacterial and yeast biofilms with a cationic porphyrin. In: Academic degrees.
Almeida A., Mateus L., Silva Y., Costa L., Pereira P. , Cunha A. (2013) Efficacy of a phage cocktail against Vibrio parahemolyticus infection in aquaculture. In: Academic degrees.
Almeida A., Pereira M., Amparo F., Tomé J., Neves G., Tomé A., Cavaleiro J., Cunha Â. (2013) Influence of external bacterial structures in the efficiency of photodynamic inactivation. In: Academic degrees.
Carla Pereira, Yolanda J. Silva, Ângela Cunha, Jesus L. Romalde, Maria L. Nunes, Adelaide Almeida (2013) SEASONAL VARIATION OF SANITARY QUALITY OF BIVALVE HARVESTING WATERS: PRELIMINARY STUDY BEFORE APPLYING PHAGE THERAPY. In: Academic degrees.
Carla Pereira, Yolanda J. Silva, Liliana Costa, Frederico Azevedo, Ângela Cunha, Adelaide Almeida (2013) Bacteriophages with potential to treat furunculosis in marine fish: survival, host specificity and host phage dynamics. In: Academic degrees.
Coelho F.J.R.C., Rocha R.J.M., Pires A.C.C., Castanheira J.M., Rocha S.M., Costa R., Almeida A., Cunha A., Lillebo A.I., Calado R., Cleary D.R.F., Gomes N.C.M. (2013) Synergistic impact of global climate change and oil pollution on estuarine sediment communities simulated in laboratory microcosms. In: Academic degrees.
Inês Baptista, Ana Luísa Santos, Carla Pereira, Newton C.M.Gomes, Ângela Cunha, Adelaide Almeida (2013) CAN INCUBATION CONDITIONS AFFECT BACTERIOPLANKTON BIOMASS PRODUCTIVITY ESTIMATES. In: Academic degrees.
Inês Baptista, Rui Queirós, Ângela Cunha, Jorge Saraiva, Sílvia M. Rocha, Adelaide Almeida (2013) HIGH PRESSURE PROCESSING IN THE INACTIVATION OF ENTEROTOXIC STAPHYLOCOCCUS AUREUS. In: Academic degrees.
Lília Mateus, Carla Pereira, Yolanda J. Silva, Liliana Costa, Ângela Cunha, Adelaide Almeida (2013) INACTIVATION OF AQUACULTURE VIBRIO PARAHEMOLYTICUS BY THE USE OF PHAGE COCKTAILS. In: Academic degrees.
Oliveira V., Gomes N.C.M., Almeida A., Ezequiel J., Serôdio J., Silva A.M.S. , Simões M.M.Q. , Silva H., Cunha A. (2013) Evaluation of plant-microbe interaction in 2-methylnaphthalene contaminated sediments. In: Academic degrees.
Pedrosa-de-Jesus M.H., Correia A., Mendo S., Cunha A., Almeida A., Guerra C., Lopes B., Moreira A., Pedrosa J. (2013) INOVAÇÃO NO ENSINO SUPERIOR. UM ESTUDO SOBRE O DESENVOLVIMENTO ACADÉMICO. In: Academic degrees.
Silva A.P., Oliveira V., Sousa F., Gomes N.C.M., Almeida A., Serafim L., Cunha A. (2013) Effect of salinity in the production of rhamnolipids by Pseudomonas strains isolated from Ria de Aveiro. In: Academic degrees.
Santos L., Vaz L., Gomes N.C.M., Vaz N., Dias J.M., Cunha A., Almeida A. (2013) Impact Freshwater Inflow on Bacterial Abundance and Activity in the Estuarine System Ria de Aveiro. In: Academic degrees.
Alves E., Melo T., Santos N., Simões C., Maciel E., Dória M.L., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Helguero L., Domingues P., Domingues M.R.M., Almeida A. Photodynamic oxidation of bacterial membrane phospholipids: a new insight provided by lipidomics. In: Academic degrees.
Alves E., Melo T., Santos N., Simões C., Maciel E., Dória M.L., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Cavaleiro J.A.S., Cunha A., Gomes N.C.M., Helguero L., Domingues P., Domingues M.R.M., Almeida A. (2014) Photodynamic oxidation of bacterial membrane phospholipids: a new insight provided by lipidomics. In: Academic degrees.
Alves E., Neves M.G.P.M.S., Cunha A., Almeida A., Faustino M.A.F. (2014) Porphyrins In the Photodynamic Inactivation of Microorganisms Beyond the Medical Scope . In: Academic degrees.
Almeida A., Alves E., Moreirinha C., Faustino A., Cunha C., Delgadillo I., Neves M.G.P.M.S. (2014) Overall Biochemical Changes in Bacteria Photosensitized with Cationic Porphyrins studied by Infrared Spectroscopy. In: Academic degrees.
Silva R. .N., Tomé A., Tomé J., Neves M., Faustino M., Cavaleiro J., Oliveira A., Almeida A., Cunha .. Photoinactivation of Bacillus endospores: inter-specific variability of the inactivation efficiency. In: Academic degrees.
Almeida A Almeida J, Tomé JP, Neves MGPMS, Tomé AC, Cavaleiro JAS, Cunha A, Costa L,. Faustino MAF Photodynamic processes for disinfection of hospital wastewaters. In: Academic degrees.
Neves M.G.P.M.S., Alves E., Costa L., Rodrigues J.M.M., Carvalho C.M.B., Almeida A., Cunha C., Faustino M.A.F., Tomé J.P.C. (2014) New Photoactive Nanomaterials for Environmental Applications. In: Academic degrees.
Tedim, J., Maia, F., Kuznetsova, A., Silva, A.P., Martins, R., Cunha, A., Almeida, A., Loureiro, S., Freitas, R., Soares, A.M.V., Zheludkevich, M.L., Ferreira, M.G.S. (2014) Use of nanostructured materials in marine corrosion protection: an integrated approach. In: Academic degrees.
Pereira C, Santos L, Silva AP, Cunha A, Romalde JL, Nunes ML, Almeida A Seasonal variation of bacterial communities in shellfish harvesting waters: preliminary study before applying phage therapy. In: Academic degrees.
Oliveira, J., Castilho, F., Cunha, A., Pereira, M. J. (2012) Development of the Portuguese bivalve production: an overview. In: Academic degrees.
Guerra, C., Pedrosa-de-Jesus, H., Correia, A., Cunha, A., Almeida, A., Watts, M. (2014) Promoting academic development trough situated critical reflection. . In: Academic degrees.
Mesquita, M., Menezes, J.C.M.D.S, Faustino, M.A.F., Neves, M.G.P.M.S., Tomé, A.C., Cunha, A., Almeida, A., Hackbarth, S., Röder, B., Cavaleiro, J.A.S. (2014) Photodynamic inactivation of bioluminescent Escherichia coli by cationic pyrrolidine-fused chlorins and isobacteriochlorins. In: Academic degrees.
Pedrosa-de-Jesus, H., Watts, M., Pedrosa, J., Almeida, A., Cunha, A., Guerra, C., (2014) Self-reflection on the Strengths, Weaknesses and Possibilities in the Academic Development of University Teachers. In: Academic degrees.
| Neves, M.G.P.M.S., Alves, E., Costa, L., Santos, C.I.M., Tomé, J.P.C., Faustino, M.A.F., Almeida, A., Cunha, A. (2014) New photoactive nanomaterials for environmental and sensing applications. In: Academic degrees.
Almeida, J., Alves, E., Neves, M.J.P.M.S., Tomé, J.P.C., Tomé, A.C., Cunha, A., Almeida, A., Faustino, M.A.F. (2014) Photodynamic inactivation of bacteria by porphyrins: influence of light parameters and antibiotics in its efficiency. In: Academic degrees.
Baptista, I., Queirós, R.P., Cunha, A., Rocha, S.M., Saraiva, J.A., Almeida, A. (2014) Evaluation of resistance development and viability recovery by toxigenic and non-toxigenic Staphylococcus aureus strains after repeated cycles of high hydrostatic pressure. . In: Academic degrees.
Beirão, S., Fernandes, S., Coelho, J., Almeida, A., Neves, M.G.P.M.S., Tomé, A.C., Faustino, M.A.F., Tomé, J., Cunha, A. (2014) Inactivation of microbial biofilms by visible light witha porphyrinic photosensitizer. . In: Academic degrees.
da Silva R. .N., Tomé A., Tomé J., Neves M., Faustino M., Cavaleiro J., Oliveira A., Almeida A., Cunha .. (2014) Photoinactivation of Bacillus endospores: inter-specific variability of the inactivation efficiency. In: Academic degrees.
Fernandez, L., Esteves, V.I., Cunha, A., Schneider, R.J., Tomé, J.P.C. (2014) Degradation of pharmaceuticals in environmental waters: combined action of bacteria, light and photosensitizers. XX Encontro Luso-Galego de Química, 26-28 November 2014, . In: Academic degrees.
Pereira, C., Santos, L., Silva, A.P., Cunha, A., Romalde, J.L., Nunes, M.L., Almeida, A. (2014) Seasonal variation of bacterial communities in shellfish harvesting waters: a preliminary study before applying phage therapy. . In: Academic degrees.
Ramalho SP, Cunha MR, Lins L, Pape E, Cordova EA, Lampadariou N, Vanreusel A (2014) Bottom trawling impacts on the deep-sea benthic communities from the SW Portuguese continental slope (NE Atlantic). In: Academic degrees.
Rocha, D., Venkatramaiah, N., Gomes, M.C.P., Almeida, A., Paz, F.A.A., Cunha, A., Tomé, J.P.C. (2014) Water Soluble zinc(II)phthalocyanines with multi-charged substituents for the photodynamic inactivation of microorganisms. . In: Academic degrees.
Silva, Y. J., Pereira, C., Costa, L., Santos, L., Cunha, A., Gomes, N.C.M., Calado, R., Almeida, A. (2015) Phage therapy as an approach to prevent Aeromonas salmonicida infections in juvenile sole fish. In: Academic degrees.
Fernández, L., Borzecka, W., Lin, Z., Schneider, R.J., Esteves, V.I. , Cunha, A., Tomé, J.P.C. (2016) Cationic magnetic nanoparticles functionalized with photosensitizers for photodynamic inactivation of microorganisms. In: Academic degrees.
New phtalocyanines bearing sulfonamide units. In: Academic degrees.
Teles, L.C, Lourencço, L., Cunha, A., Faulstino, M.A.F., Neves, M.G.P.M.S., Cavaleiro, J.A.S., Tomé, J.P.C., Almeida, A. Application of phthalocyanines and porphyrins in bloo sterilization. In: Academic degrees.
Mesquita, M., Menezes, J.C.M.D.S, Neves, M.G.P.M.S., Cavaleiro, J.A.S., Cunha, A., Almeida, A., Faustino, M.A.F., Immobilized cholrine derivatives and its reusability on photodynamic inactivation of bioluminescent e. coli . In: Academic degrees.
Fernández, L., Almeida, A., esteves, V., cunha, A., Schneider, R., Tomé, J.P.C., Efficient removal of 17beta-estradiol from aqueous media by visible-light assisted photosensitization and biodegradationt . In: Academic degrees.
Alves, E., Faustino, M.A.F., Tomé, J.P.C., Tomé, A.C., Neves, M.G.P.M.S., Cavaleiro, J.A.S., Cunha, A., Domingues, M.R.M., Almeida, A. (2015) Seven years of research in environmental antimicrobial PDI at the University of Aveiro: contributions and challenges. . In: Academic degrees.
Couceiro, J., Martins, C., Neves, M.G.P.M.S., Faustino, M.A.F., Saraiva, J.M., Almeida, A., Cunha, A. (2015) Light-induced inactivation of bacterial endospores: high-pressure enhances photosensitizer binding and improves inactivation efficiency. In: Academic degrees.
Neves, M.G.P.M.S., Alves, E., Mesquita, M., Rodrigues, J.M.M., Almeida, A., Cunha, A., Faustino, M.A.F. (2015) Development of photoactive materials for environmental applications. . In: Academic degrees.
Santos, L.M.P., Pinto, A., Filipe, O., Cunha, A., Santos, E.B.H., Almeida, (2015) A. Insights on the optical properties of estuarine DOM – and biological influences. In: Academic degrees.
Bartolomeu, M.M., Rocha, S., Cunha, A., Neves, M.G.P.M.S., Faustino, M.A.F., Almeida, A. (2015) Effect of photodynamic therapy on the virulence factors of Staphylococcus aureus. In: Academic degrees.
Bonifácio, D., Couceiro, J., Fernandes, A.A., Faustino, M.A.F., Almeida, A., Cunha, A. (2015) Interactive effect of visible light and an extract of Curcuma longa on Listeria biofilms. In: Academic degrees.
Castro, K.A.D.F., Moura, N.M.M., Fernandes, A., Faustino, M.A.F., Simões, M.M.Q., Cavaleiro, J.A.S., Nakagaki, S., Almeida, A., Cunha, A., Silvestre, A.J.D., Freire, C.S.R., Pinto, R.J.B., Neves, M.G.P.M.S 1, M. Graça P.M.S. Neves (2015) Study of inactivation of Listeria monocytogenes with porphyrins and porphyrin-chitosan materials. In: Academic degrees.
Nunes-da-Silva, R.S.O., Cunha, A., Almeida, A., Tomé, A.C. (2015) New phthalocyanines bearing sulfonamide units. In: Academic degrees.
Reis, S., Cunha, A., Neves, M.G.P.M.S., Fontes, M., Faustino, M.A.F., Almeida, A. (2015) Photodynamic inactivation of microorganisms in wastewaters. In: Academic degrees.
Rocha, D., Venkatramaiah, N., Gomes, M.C., Faustino, M.A.F., Almeida, A., Paz, F., Cunha, A., Tomé, J.P.C. (2015) Photodynamic inactivation of Escherichia coli with quaternized amphiphilic water-soluble Zn(II)phthalocyanines. In: Academic degrees.
Santos, L., E.B.H. Santos, Cunha, A., Almeida, A. (2015) Photochemical and microbial alterations of DOM spectroscopic properties in the estuarine system Ria de Aveiro. In: Academic degrees.
Silva, Y., Pereira, C., Costa, L., Santos, L., Cunha, A., Gomes, N.C.M., Calado, R., Almeida, A. (2015) Phage therapy as an approach to prevent Aeromonas salmonicida infections in juvenile sole fish. In: Academic degrees.
Tedim, J., Bastos, A.C., Domingues, E.M., Yasakau, K., Salak, A.N., Cunha, A., Almeida, A., Zheludkevich, M.L. Ferreira, M.G.S. (2015) Exploring the versatility of layered double hydroxides conversion films towards different applications. In: Academic degrees.
Bartolomeu, M., Rocha, S., Cunha, A., Neves, M.G.P.M.S., Faustino, M.A.F., Almeida, A. (2015) Photodynamic inactivation of Staphylococcus aureus: effects on virulence factors. In: Academic degrees.
Nunes-da-Silva, R.S.O., Cunha, A., Almeida, A., Tomé, A.C. (2015) New phthalocyanines bearing sulfonamide units. In: Academic degrees.
Louvado, A., Almeida, A., Simões, M.M. Q., Gomes, N.C.M., Cunha, A. (2015) Biodegradation of PAHs and biosurfactant production in deep sea bacteria. In: Academic degrees.
Sena, C., Azevedo, M.R., Ribeiro, S., Gomes, N., Coelho, F., Marques, A., Cunha, A., Almeida, A., Pinheiro, L.M. & Expedition 351 Scientists. (2015) Water-rock interactions and geomicrobiology in a sedimentary basin that records large volcanic eruptions – IODP Expedition 351. In: Academic degrees.
Cunha, A. (2015) Photodynamic inactivation of resistant bacterial forms: endospores and biofilms. In: Academic degrees.
Inácio, R.S., Santos, D.I., Gomes, P., Loureiro, M., Carvalho, F., Da Silva, J.L., Cunha, A., Almeida, A., Delgadillo, I., Saraiva, J. (2015) Microbial and sensorial shelf-life extension of sliced cooked ham by high pressure pasteurization. In: Academic degrees.
Cunha, A. (2015) UV effects on estuarine bacterioneuston. In: Academic degrees.
Cunha, A. (2016) Dinâmica do bacterioplâncton da ria de Aveiro. In: Academic degrees. 49-57.
Cunha, A. (2016) Microbial biofilms: going sessile to succeed. In: Academic degrees.
Fernández, L., Lin, Z., Almeida, A., Schneider, R.J., Esteves, V.I. , Cunha, A., Tomé, J.P.C. (2016) Photodynamic inactivation of E. coli using magnetic nanoparticles containing glycosylated porphyrins. . In: Academic degrees.
Domingues, P.M., Almeida, A., Serafim, L.S., Gomes, N.C.M., Cunha, A. (2016) Response of bacterial communities from deep-sea active and inactive mud volcanoes to the presence of crude oil in nitrate-reduction conditions. . In: Academic degrees.
Gomes, M.C., Cunha, A., Tomé, J.P.C., Trindade, T., Zheng, G. (2016) Carbohydrate coated gold nanoparticles as SERS probes for confocal raman microscopy of cancer cells. . In: Academic degrees.
Silva, R.N., Cunha, A., Almeida, A., Tomé, A.C. (2016) Photodynamic inactivation of gram positive and gram negative bacteria with phthalocyanines bearing sulfonamide units. In: Academic degrees.
Almeida A, Bartolomeu M, Rocha S, Cunha Â, Neves MGPMS, Faustino MAF (2017) Effect of photodynamic therapy on the virulence factors of Staphylococcus aureus. In: Academic degrees.
Other Publications (13)
Pato P., Pinto C., Cunha A., Almeida M.A., Pereira M.E., Vale C., Duarte A.C. (2004) Tidal variability in the transport of particulate mercury. In: Proceedings of the 7th International Conference on Mercury as a Global Pollutant. Horvat M, Ogrinc N, Faganeli J, Kotnik J (Eds.), RMZ - Materials and Geoenvironment 51(2), pp. 1300-1303. In: Academic degrees.
Carvalho C.M.B., Costa L., Alves E., Almeida A., Cunha M.A.S.D.A., Tomé J.P.C., Faustino M.A.F, Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Lin Z., Rainho J.P., Rocha J. (2007) Patente Nacional nº 103828 Materiais híbridos nanomagnete-porfirina, processo para a síntese e respectiva aplicação em desinfecção de águas. In: Academic degrees.
Louvado A., Santos A. L., Coelho F., Sousa S., Moreira A., Gomes F., Almeida A., Gomes N. C. M., Cunha Â. (2010) Isolation of Surfactant-Resistant Bacteria from the Surface Microlayer, Interdisciplinary Studies on Environmental Chemistry-Biological Responses to Contaminants, Eds., N. Hamamura, S. Suzuki, S. Mendo, C. M. Barroso, H. Iwata and S. Tanabe, pp. 89-95. © by TERRAPUB, Tokyo, 2010. In: Academic degrees.
Coelho F.J.R.C., Santos A.L., Oliveira V., Santos L., Gomes N.C.M., Almeida A., Cunha A. (2011) Padrões de Variação da Actividade Enzimática Extracelular Bacteriana na Ria de Aveiro. Actas das Jornadas da Ria de Aveiro. 295-301. In: Academic degrees.
Alves E., Arrojado C., Pereira C., Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Almeida A. (2011) Terapia Fotodinâmica Antimicrobiana como Alternativa aos Antibióticos para Inactivar Bactérias Patogénicas em Águas de Piscicultura. In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar. Aveiro. 369 pp. In: Academic degrees.
Alves E., Tomé J., Neves G., Tomé A., Cavaleiro J., Faustino A., Cunha Â., Gomes N., Almeida A. (2011) Antimicrobial photodynamic therapy: Low environmental impact approach to inactivate pathogenic bacteria in aquaculture systems. Research Day@UA. University of Aveiro. 8th June 2011, Aveiro, Portugal. In: Academic degrees.
Domingues P.M., Louvado A., Coelho F.J.R.C., Santos A.L., Gomes N.C.M., Almeida A., Cunha A. (2011) Isolamento e Caracterização de Bactérias Produtoras de Biossurfactantes da Ria de Aveiro. In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.). Actas das Jornadas da Ria de Aveiro. CESAM, Universidade de Aveiro. Aveiro. Portugal. 214-218. In: Academic degrees.
Almeida A., Cunha C. , Gomes N.C.M., Santos L., Mendes C. , Pereira C. (2011) Impacto do Virioplâncton sobre a Comunidade Bacteriana da Ria de Aveiro. Jornadas da Ria de Aveiro (2011). In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar. Aveiro. 369 pp. In: Academic degrees.
Santos L., Gomes N. C. M., Cunha A., Almeida A. (2011) Variação da abundância e produtividade bacteriana na Ria de Aveiro durante um período de 10 anos (1996-2007) In: Almeida A. AFL, Bernardes C., Dias J. M., Gomes N. C. M., Pereira E., Queiroga H., Serôdio J. e Vaz N. (ed) Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar, Aveiro, p 205-213. In: Academic degrees.
Pereira C., Silva Y.J., Gomes N.C.M., Cunha A., Almeida A. (2011) Terapia Fágica como Alternativa de Baixo Impacto Ambiental para Inactivar Bactérias Patogénicas em pisciculturas.In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar. Aveiro. pp. 340-348 . In: Academic degrees.
Rodrigues M., Dias J.M., Leandro S., Morgado F., Cunha A., Almeida A., Oliveira A., Queiroga H. (2011) Caracterização Sinóptica dos Gradientes nos Canais da Ria de Aveiro. Parte II: Oxigénio, Clorofila e Zonação Ecológica. In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. and Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM – Centro de Estudos do Ambiente e do Mar. Aveiro. 373 pp., ISBN: 978-972-789-337-9, 151-158. In: Academic degrees.
Lopes J.F., Almeida M.A., Cunha M.A. (2011) Alves E., Arrojado C., Pereira C., Carvalho C.M.B., Faustino M.A.F., Tomé J.P.C., Neves M.G.P.M.S., Tomé A.C., Cavaleiro J.A.S., Cunha Â., Gomes N.C.M., Almeida A.(2011) Terapia Fotodinâmica Antimicrobiana como Alternativa aos Antibióticos para Inactivar Bactérias Patogénicas em Águas de Piscicultura. In: Almeida, A., Alves, F.L., Bernardes, C., Dias, J.M., Gomes, N.C.M., Pereira, E., Queiroga, H., Serôdio, J. e Vaz, N. (Eds.), 2011. Actas das Jornadas da Ria de Aveiro 2011. Universidade de Aveiro, CESAM - Centro de Estudos do Ambiente e do Mar. Aveiro. 369 pp. In: Academic degrees.
Tchepel O., Pereira E., Evtyugina M., Almeida A., Cunha A., Nunes T. , Duarte R. (2010) Biosphere-Atmosphere Interaction in a Changing Environment: from Local to Global Scale. Workshop Proceeding. CESAM, Universidade de Aveiro. AMB-QA-10/2010, Aveiro, Portugal. In: Academic degrees.

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